RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 CCL18P55774 89 aa12.27□□□□□ -0.44
LRCH3-201ENST00000334859 SNCGO76070 127 aa12.27□□□□□ -0.45
LRCH3-201ENST00000334859 IGHV4-28A0A0C4DH34 117 aa12.26□□□□□ -0.45
LRCH3-201ENST00000334859 FAM218AQ96MZ4 157 aa12.26□□□□□ -0.45
LRCH3-201ENST00000334859 TRACP01848 142 aa12.25□□□□□ -0.45
LRCH3-201ENST00000334859 DAD1P61803 113 aa12.25□□□□□ -0.45
LRCH3-201ENST00000334859 TEP1Q99973 2627 aaKnown RBP12.25□□□□□ -0.45
LRCH3-201ENST00000334859 RPL28P46779 137 aaKnown RBP12.24□□□□□ -0.45
LRCH3-201ENST00000334859 LINC00269Q8N2A0 174 aa12.24□□□□□ -0.45
LRCH3-201ENST00000334859 HIVEP1P15822 2718 aa12.24□□□□□ -0.45
LRCH3-201ENST00000334859 CITED1Q99966 193 aa12.23□□□□□ -0.45
LRCH3-201ENST00000334859 DEFB121Q5J5C9 76 aa12.22□□□□□ -0.45
LRCH3-201ENST00000334859 Q8N3U1 123 aa12.22□□□□□ -0.45
LRCH3-201ENST00000334859 TRAV26-1A0A087WT03 109 aa12.22□□□□□ -0.45
LRCH3-201ENST00000334859 Q8IZM0 81 aa12.22□□□□□ -0.45
LRCH3-201ENST00000334859 C15orf53Q8NAA6 179 aa12.22□□□□□ -0.45
LRCH3-201ENST00000334859 SMIM11BQ8TCY0 68 aa12.22□□□□□ -0.45
LRCH3-201ENST00000334859 CELA1Q9UNI1 258 aa12.22□□□□□ -0.45
LRCH3-201ENST00000334859 BAALC-AS2P0C853 105 aa12.21□□□□□ -0.45
LRCH3-201ENST00000334859 IGLV10-54A0A075B6I4 117 aa12.21□□□□□ -0.46
LRCH3-201ENST00000334859 ANGP03950 147 aaKnown RBP12.21□□□□□ -0.46
LRCH3-201ENST00000334859 FAM240AA0A1B0GVK7 77 aa12.2□□□□□ -0.46
LRCH3-201ENST00000334859 HTN3P15516 51 aa12.2□□□□□ -0.46
LRCH3-201ENST00000334859 OR13C6PQ8NH95 151 aa12.2□□□□□ -0.46
LRCH3-201ENST00000334859 Q9HAA7 133 aa12.2□□□□□ -0.46
LRCH3-201ENST00000334859 ATP5G1P05496 136 aa12.2□□□□□ -0.46
LRCH3-201ENST00000334859 GAGE2BQ13066 116 aa12.2□□□□□ -0.46
LRCH3-201ENST00000334859 GAGE2EQ4V326 116 aa12.2□□□□□ -0.46
LRCH3-201ENST00000334859 GAGE2DQ9UEU5 116 aa12.2□□□□□ -0.46
LRCH3-201ENST00000334859 TTC32Q5I0X7 151 aa12.19□□□□□ -0.46
LRCH3-201ENST00000334859 Q8NAQ8 132 aa12.19□□□□□ -0.46
LRCH3-201ENST00000334859 CHCHD10Q8WYQ3 142 aaPredicted RBP12.18□□□□□ -0.46
LRCH3-201ENST00000334859 MIFP14174 115 aa12.18□□□□□ -0.46
LRCH3-201ENST00000334859 REG3AQ06141 175 aa12.18□□□□□ -0.46
LRCH3-201ENST00000334859 CD164L2Q6UWJ8 174 aa12.17□□□□□ -0.46
LRCH3-201ENST00000334859 TRRAPQ9Y4A5 3859 aa12.17□□□□□ -0.46
LRCH3-201ENST00000334859 DNAL4O96015 105 aa12.17□□□□□ -0.46
LRCH3-201ENST00000334859 MALP21145 153 aa12.17□□□□□ -0.46
LRCH3-201ENST00000334859 CFAP161Q6P656 301 aa12.17□□□□□ -0.46
LRCH3-201ENST00000334859 A0A087WYN8 130 aa12.16□□□□□ -0.46
LRCH3-201ENST00000334859 LINC01561Q8N1V8 128 aa12.16□□□□□ -0.46
LRCH3-201ENST00000334859 SPART-AS1P0CW21 52 aa12.15□□□□□ -0.46
LRCH3-201ENST00000334859 ANAPC13Q9BS18 74 aa12.15□□□□□ -0.46
LRCH3-201ENST00000334859 IGHV4-30-4P0DP06 118 aa12.14□□□□□ -0.47
LRCH3-201ENST00000334859 MRPL23Q16540 153 aaKnown RBP12.13□□□□□ -0.47
LRCH3-201ENST00000334859 C22orf24Q9Y442 160 aa12.13□□□□□ -0.47
LRCH3-201ENST00000334859 H0YGX0 51 aa12.13□□□□□ -0.47
LRCH3-201ENST00000334859 KIAA0087Q14695 138 aa12.12□□□□□ -0.47
LRCH3-201ENST00000334859 CXCL5P42830 114 aa12.11□□□□□ -0.47
LRCH3-201ENST00000334859 LECT2O14960 151 aa12.11□□□□□ -0.47
LRCH3-201ENST00000334859 ACYP1P07311 99 aa12.11□□□□□ -0.47
LRCH3-201ENST00000334859 INAFM2P0DMQ5 153 aa12.09□□□□□ -0.47
LRCH3-201ENST00000334859 PRR3P79522 188 aaKnown RBP12.09□□□□□ -0.47
LRCH3-201ENST00000334859 C9orf116Q5BN46 136 aaPredicted RBP12.09□□□□□ -0.47
LRCH3-201ENST00000334859 Q6Q795 121 aa12.09□□□□□ -0.47
LRCH3-201ENST00000334859 LELP1Q5T871 98 aa12.09□□□□□ -0.47
LRCH3-201ENST00000334859 WFDC9Q8NEX5 89 aa12.09□□□□□ -0.47
LRCH3-201ENST00000334859 NDUFV3P56181 108 aaKnown RBP12.08□□□□□ -0.48
LRCH3-201ENST00000334859 COX17Q14061 63 aa12.08□□□□□ -0.48
LRCH3-201ENST00000334859 GAGE2AQ6NT46 116 aa12.07□□□□□ -0.48
LRCH3-201ENST00000334859 KLK12Q9UKR0 248 aa12.06□□□□□ -0.48
LRCH3-201ENST00000334859 SPAG11BQ08648 103 aa12.05□□□□□ -0.48
LRCH3-201ENST00000334859 WIPF1O43516 503 aa12.04□□□□□ -0.48
LRCH3-201ENST00000334859 SLPIP03973 132 aa12.04□□□□□ -0.48
LRCH3-201ENST00000334859 SMCR5Q8TEV8 140 aa12.04□□□□□ -0.48
LRCH3-201ENST00000334859 LINC00526Q96FQ7 95 aa12.04□□□□□ -0.48
LRCH3-201ENST00000334859 C6orf223Q8N319 242 aa12.04□□□□□ -0.48
LRCH3-201ENST00000334859 NDUFC2O95298 119 aa12.03□□□□□ -0.48
LRCH3-201ENST00000334859 NCR3O14931 201 aa12.03□□□□□ -0.48
LRCH3-201ENST00000334859 NHLRC4P0CG21 123 aaPredicted RBP12.03□□□□□ -0.48
LRCH3-201ENST00000334859 C9orf129Q5T035 196 aaKnown RBP12.03□□□□□ -0.48
LRCH3-201ENST00000334859 NANOS2P60321 138 aaKnown RBP12.02□□□□□ -0.49
LRCH3-201ENST00000334859 C14orf132Q9NPU4 83 aa12.02□□□□□ -0.49
LRCH3-201ENST00000334859 TRBV7-7A0A0K0K1E9 115 aa12.02□□□□□ -0.49
LRCH3-201ENST00000334859 C10orf25Q5T742 122 aa12.02□□□□□ -0.49
LRCH3-201ENST00000334859 UNQ6190/PRO20217Q6UXQ8 127 aa12.02□□□□□ -0.49
LRCH3-201ENST00000334859 OXLD1Q5BKU9 147 aa12.01□□□□□ -0.49
LRCH3-201ENST00000334859 TMEM126AQ9H061 195 aa12.01□□□□□ -0.49
LRCH3-201ENST00000334859 RETNQ9HD89 108 aa12.01□□□□□ -0.49
LRCH3-201ENST00000334859 KLK5Q9Y337 293 aaPredicted RBP12.01□□□□□ -0.49
LRCH3-201ENST00000334859 PRR34Q9NV39 138 aa12□□□□□ -0.49
LRCH3-201ENST00000334859 ORMDL1Q9P0S3 153 aa12□□□□□ -0.49
LRCH3-201ENST00000334859 LINC00643Q86TS7 51 aa12□□□□□ -0.49
LRCH3-201ENST00000334859 LYPD5Q6UWN5 251 aa11.99□□□□□ -0.49
LRCH3-201ENST00000334859 Q8NDZ9 215 aa11.99□□□□□ -0.49
LRCH3-201ENST00000334859 CYSRT1A8MQ03 144 aa11.99□□□□□ -0.49
LRCH3-201ENST00000334859 ENHOQ6UWT2 76 aa11.99□□□□□ -0.49
LRCH3-201ENST00000334859 F8P00451 2351 aa11.99□□□□□ -0.49
LRCH3-201ENST00000334859 S100A7L2Q5SY68 101 aa11.98□□□□□ -0.49
LRCH3-201ENST00000334859 KRTAP10-11P60412 298 aa11.95□□□□□ -0.5
LRCH3-201ENST00000334859 C6orf99Q4VX62 202 aa11.95□□□□□ -0.5
LRCH3-201ENST00000334859 Q8N814 137 aa11.95□□□□□ -0.5
LRCH3-201ENST00000334859 OBSCN-AS1Q96MR7 158 aa11.95□□□□□ -0.5
LRCH3-201ENST00000334859 KPRPQ5T749 579 aaPredicted RBP11.95□□□□□ -0.5
LRCH3-201ENST00000334859 SDIM1Q6ZPB5 146 aa11.95□□□□□ -0.5
LRCH3-201ENST00000334859 PKD1L1Q8TDX9 2849 aa11.95□□□□□ -0.5
LRCH3-201ENST00000334859 A0A0J9YWU9 116 aa11.94□□□□□ -0.5
LRCH3-201ENST00000334859 WFDC10BQ8IUB3 73 aa11.94□□□□□ -0.5
LRCH3-201ENST00000334859 IMUPQ9GZP8 106 aa11.94□□□□□ -0.5
LRCH3-201ENST00000334859 FAM236AA0A1B0GUQ0 79 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms