RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 B4DSR2 109 aa4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 RSPO1Q2MKA7 263 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 IGLV1-44P01699 117 aa4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 IGLV6-57P01721 117 aa4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 C9orf106Q8NAJ2 232 aa4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 SMCR5Q8TEV8 140 aa4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 SYCNQ0VAF6 134 aa4.37□□□□□ -1.71
CDC42BPA-201ENST00000334218 ZFP36P26651 326 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-201ENST00000334218 TLN1Q9Y490 2541 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-201ENST00000334218 EPM2AB3EWF7 344 aa4.37□□□□□ -1.71
CDC42BPA-201ENST00000334218 SPART-AS1P0CW21 52 aa4.37□□□□□ -1.71
CDC42BPA-201ENST00000334218 SLPIP03973 132 aa4.36□□□□□ -1.71
CDC42BPA-201ENST00000334218 PRO0461Q9UI25 63 aa4.36□□□□□ -1.71
CDC42BPA-201ENST00000334218 TLX1NBP0CAT3 122 aa4.36□□□□□ -1.71
CDC42BPA-201ENST00000334218 IGKV1-27A0A075B6S5 117 aa4.36□□□□□ -1.71
CDC42BPA-201ENST00000334218 IGHV3-38A0A0C4DH36 116 aa4.36□□□□□ -1.71
CDC42BPA-201ENST00000334218 CEP295Q9C0D2 2601 aa4.36□□□□□ -1.71
CDC42BPA-201ENST00000334218 CACNA1AO00555 2505 aa4.36□□□□□ -1.71
CDC42BPA-201ENST00000334218 IGHV3-16A0A0C4DH30 117 aa4.36□□□□□ -1.71
CDC42BPA-201ENST00000334218 IGKV1-16P04430 117 aa4.36□□□□□ -1.71
CDC42BPA-201ENST00000334218 S4R3C0 116 aa4.36□□□□□ -1.71
CDC42BPA-201ENST00000334218 A0A0G2JRQ6 117 aa4.35□□□□□ -1.71
CDC42BPA-201ENST00000334218 Q6ZQT0 140 aa4.35□□□□□ -1.71
CDC42BPA-201ENST00000334218 C22orf24Q9Y442 160 aa4.35□□□□□ -1.71
CDC42BPA-201ENST00000334218 KLK12Q9UKR0 248 aa4.35□□□□□ -1.71
CDC42BPA-201ENST00000334218 POM121L12Q8N7R1 296 aa4.35□□□□□ -1.71
CDC42BPA-201ENST00000334218 PKD1L2Q7Z442 2459 aa4.34□□□□□ -1.71
CDC42BPA-201ENST00000334218 U3KQA8 63 aa4.34□□□□□ -1.71
CDC42BPA-201ENST00000334218 PCOTHQ58A44 107 aa4.34□□□□□ -1.71
CDC42BPA-201ENST00000334218 LINC01356Q8N9X3 169 aa4.34□□□□□ -1.71
CDC42BPA-201ENST00000334218 K7EIM0 57 aa4.34□□□□□ -1.71
CDC42BPA-201ENST00000334218 IGKV1OR2-108A0A075B7D4 117 aa4.34□□□□□ -1.72
CDC42BPA-201ENST00000334218 KPRPQ5T749 579 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 TP53TG3Q9ULZ0 132 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 ADORA2A-AS1P86434 159 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGHV3OR16-8A0A075B7F1 116 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 C11orf45Q8TAV5 145 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 PRO0255Q9UI72 69 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 NAV2Q8IVL1 2488 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 TRBV7-4A0A0J9YYF1 115 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 LINC00313P59037 77 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 C6orf223Q8N319 242 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 LY6G6DO95868 133 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 DAZAP2Q15038 168 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGKV2-28A0A075B6P5 120 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGKV1D-37A0A075B6S9 117 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGKV2D-28P01615 120 aa4.33□□□□□ -1.72
CDC42BPA-201ENST00000334218 A0A087WYN8 130 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGLV4-69A0A075B6H9 119 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 LINC01546A6NGU7 62 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 WT1-ASQ06250 92 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 CLPSL2Q6UWE3 100 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 Q6ZRP5 223 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 PLA2G2DQ9UNK4 145 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGKV1-12A0A0C4DH73 117 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGKV1D-12P01611 117 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 LTBP2Q14767 1821 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 DEFB113Q30KQ7 82 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 RITA1Q96K30 269 aa4.32□□□□□ -1.72
CDC42BPA-201ENST00000334218 MUC6Q6W4X9 2439 aa4.31□□□□□ -1.72
CDC42BPA-201ENST00000334218 FRMD6-AS1P0C7T7 363 aa4.31□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGKV1-6A0A0C4DH72 117 aa4.31□□□□□ -1.72
CDC42BPA-201ENST00000334218 NPBQ8NG41 125 aa4.31□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGKV1D-17A0A075B6S4 117 aa4.31□□□□□ -1.72
CDC42BPA-201ENST00000334218 OVOL3O00110 214 aa4.31□□□□□ -1.72
CDC42BPA-201ENST00000334218 LINC00588Q9Y4M8 146 aa4.31□□□□□ -1.72
CDC42BPA-201ENST00000334218 M0QY20 66 aa4.3□□□□□ -1.72
CDC42BPA-201ENST00000334218 BDP1A6H8Y1 2624 aa4.3□□□□□ -1.72
CDC42BPA-201ENST00000334218 LINC01548A6NM66 108 aa4.3□□□□□ -1.72
CDC42BPA-201ENST00000334218 PRR3P79522 188 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-201ENST00000334218 EGFEM1PQ0D2K5 195 aa4.3□□□□□ -1.72
CDC42BPA-201ENST00000334218 F8W735 103 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-201ENST00000334218 JMJD1CQ15652 2540 aa4.3□□□□□ -1.72
CDC42BPA-201ENST00000334218 FAM215AQ9Y5M1 114 aa4.3□□□□□ -1.72
CDC42BPA-201ENST00000334218 DEFB131BA0A096LNP1 70 aa4.29□□□□□ -1.72
CDC42BPA-201ENST00000334218 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
CDC42BPA-201ENST00000334218 DMBT1Q9UGM3 2413 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-201ENST00000334218 LY6LH3BQJ8 138 aa4.29□□□□□ -1.72
CDC42BPA-201ENST00000334218 Q8N2B8 174 aa4.29□□□□□ -1.72
CDC42BPA-201ENST00000334218 GDF5OSQ5U4N7 250 aa4.29□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGLV2-18A0A075B6J9 118 aa4.29□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGIPA6NJ69 53 aa4.29□□□□□ -1.72
CDC42BPA-201ENST00000334218 TLN2Q9Y4G6 2542 aa4.28□□□□□ -1.72
CDC42BPA-201ENST00000334218 C18orf65Q6ZTR6 163 aa4.28□□□□□ -1.72
CDC42BPA-201ENST00000334218 C11orf1Q9H5F2 150 aa4.28□□□□□ -1.72
CDC42BPA-201ENST00000334218 PINLYPA6NC86 204 aa4.28□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGLV1-47P01700 117 aa4.28□□□□□ -1.72
CDC42BPA-201ENST00000334218 IGLV2-8P01709 118 aa4.28□□□□□ -1.72
CDC42BPA-201ENST00000334218 KIF25-AS1Q9Y6Z4 181 aa4.28□□□□□ -1.72
CDC42BPA-201ENST00000334218 A8MWP4 228 aa4.27□□□□□ -1.73
CDC42BPA-201ENST00000334218 INAFM1C9JVW0 142 aa4.27□□□□□ -1.73
CDC42BPA-201ENST00000334218 Q6ZS46 218 aa4.27□□□□□ -1.73
CDC42BPA-201ENST00000334218 FAM104AQ969W3 186 aa4.27□□□□□ -1.73
CDC42BPA-201ENST00000334218 DEFB104AQ8WTQ1 72 aa4.27□□□□□ -1.73
CDC42BPA-201ENST00000334218 I3L2K1 104 aa4.27□□□□□ -1.73
CDC42BPA-201ENST00000334218 POLR2KP53803 58 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-201ENST00000334218 J3QL48 77 aa4.27□□□□□ -1.73
CDC42BPA-201ENST00000334218 LINC00476Q8WZB0 136 aa4.27□□□□□ -1.73
CDC42BPA-201ENST00000334218 ZFHX2Q9C0A1 2572 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms