RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 ZC2HC1BQ5TFG8 222 aa7.63□□□□□ -1.19
CMTM1-203ENST00000333001 SPINK6Q6UWN8 80 aa7.63□□□□□ -1.19
CMTM1-203ENST00000333001 Q8IZM0 81 aa7.63□□□□□ -1.19
CMTM1-203ENST00000333001 C6orf48Q9UBA6 75 aa7.63□□□□□ -1.19
CMTM1-203ENST00000333001 NDUFC2-KCTD14E9PQ53 114 aa7.62□□□□□ -1.19
CMTM1-203ENST00000333001 TRAPPC1Q9Y5R8 145 aa7.62□□□□□ -1.19
CMTM1-203ENST00000333001 TINCRA0A1B0GVN0 87 aa7.61□□□□□ -1.19
CMTM1-203ENST00000333001 CXCL5P42830 114 aa7.61□□□□□ -1.19
CMTM1-203ENST00000333001 GAGE2EQ4V326 116 aa7.61□□□□□ -1.19
CMTM1-203ENST00000333001 TOMM7Q9P0U1 55 aa7.61□□□□□ -1.19
CMTM1-203ENST00000333001 GAGE2DQ9UEU5 116 aa7.61□□□□□ -1.19
CMTM1-203ENST00000333001 CDKN2A-AS1Q9UH64 79 aa7.61□□□□□ -1.19
CMTM1-203ENST00000333001 RAB5BP61020 215 aa7.6□□□□□ -1.19
CMTM1-203ENST00000333001 PMVKQ15126 192 aa7.6□□□□□ -1.19
CMTM1-203ENST00000333001 REG3GQ6UW15 175 aa7.6□□□□□ -1.19
CMTM1-203ENST00000333001 C2orf82Q6UX34 121 aa7.6□□□□□ -1.19
CMTM1-203ENST00000333001 LINC00469Q8N7U9 141 aa7.6□□□□□ -1.19
CMTM1-203ENST00000333001 LINC00614P0C842 121 aa7.59□□□□□ -1.19
CMTM1-203ENST00000333001 SRSF9Q13242 221 aaKnown RBP eCLIP7.59□□□□□ -1.19
CMTM1-203ENST00000333001 PDZD11Q5EBL8 140 aa7.59□□□□□ -1.19
CMTM1-203ENST00000333001 CST9LQ9H4G1 147 aa7.59□□□□□ -1.19
CMTM1-203ENST00000333001 IGLV5-45A0A087WSX0 123 aa7.58□□□□□ -1.2
CMTM1-203ENST00000333001 A6NJY4 79 aa7.58□□□□□ -1.2
CMTM1-203ENST00000333001 F8VRH5 84 aa7.58□□□□□ -1.2
CMTM1-203ENST00000333001 PHF5AQ7RTV0 110 aaKnown RBP7.58□□□□□ -1.2
CMTM1-203ENST00000333001 LINC01600Q96MT4 127 aa7.58□□□□□ -1.2
CMTM1-203ENST00000333001 H3BRM9 83 aa7.57□□□□□ -1.2
CMTM1-203ENST00000333001 C18orf32Q8TCD1 76 aa7.57□□□□□ -1.2
CMTM1-203ENST00000333001 PSORS1C2Q9UIG4 136 aa7.57□□□□□ -1.2
CMTM1-203ENST00000333001 MT1HL1P0DM35 61 aa7.56□□□□□ -1.2
CMTM1-203ENST00000333001 ODF1Q14990 250 aa7.56□□□□□ -1.2
CMTM1-203ENST00000333001 C1orf137Q5JT78 98 aa7.56□□□□□ -1.2
CMTM1-203ENST00000333001 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
CMTM1-203ENST00000333001 FAM168BA1KXE4 195 aa7.55□□□□□ -1.2
CMTM1-203ENST00000333001 SMIM1B2RUZ4 78 aa7.55□□□□□ -1.2
CMTM1-203ENST00000333001 ATP5LO75964 103 aa7.55□□□□□ -1.2
CMTM1-203ENST00000333001 HBDP02042 147 aa7.55□□□□□ -1.2
CMTM1-203ENST00000333001 COX7B2Q8TF08 81 aa7.55□□□□□ -1.2
CMTM1-203ENST00000333001 M0QXV9 152 aa7.54□□□□□ -1.2
CMTM1-203ENST00000333001 C9orf129Q5T035 196 aaKnown RBP7.54□□□□□ -1.2
CMTM1-203ENST00000333001 IGLC3P0DOY3 106 aa7.53□□□□□ -1.2
CMTM1-203ENST00000333001 NDUFA6P56556 154 aa7.53□□□□□ -1.2
CMTM1-203ENST00000333001 UBE2BP63146 152 aa7.53□□□□□ -1.2
CMTM1-203ENST00000333001 LBHQ53QV2 105 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-203ENST00000333001 RNF213Q63HN8 5207 aa7.52□□□□□ -1.21
CMTM1-203ENST00000333001 A0A096LNJ9 63 aa7.52□□□□□ -1.21
CMTM1-203ENST00000333001 IGLV7-43P04211 117 aa7.52□□□□□ -1.21
CMTM1-203ENST00000333001 DIRC1Q969H9 104 aa7.52□□□□□ -1.21
CMTM1-203ENST00000333001 URB1-AS1Q96HZ7 61 aa7.52□□□□□ -1.21
CMTM1-203ENST00000333001 SPINK8P0C7L1 97 aa7.51□□□□□ -1.21
CMTM1-203ENST00000333001 CHCHD1Q96BP2 118 aaKnown RBP7.51□□□□□ -1.21
CMTM1-203ENST00000333001 LRP2P98164 4655 aa7.5□□□□□ -1.21
CMTM1-203ENST00000333001 SFTA2Q6UW10 78 aa7.5□□□□□ -1.21
CMTM1-203ENST00000333001 KRTAP7-1Q8IUC3 87 aa7.5□□□□□ -1.21
CMTM1-203ENST00000333001 YPEL4Q96NS1 127 aa7.5□□□□□ -1.21
CMTM1-203ENST00000333001 XAGE1AQ9HD64 81 aa7.5□□□□□ -1.21
CMTM1-203ENST00000333001 TP73-AS1Q9UF72 201 aa7.5□□□□□ -1.21
CMTM1-203ENST00000333001 IGLV5-39A0A0G2JS06 123 aa7.49□□□□□ -1.21
CMTM1-203ENST00000333001 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
CMTM1-203ENST00000333001 PMCHL1Q16048 86 aa7.49□□□□□ -1.21
CMTM1-203ENST00000333001 BAGE3Q86Y29 109 aa7.49□□□□□ -1.21
CMTM1-203ENST00000333001 C22orf24Q9Y442 160 aa7.49□□□□□ -1.21
CMTM1-203ENST00000333001 TNXBP22105 4242 aa7.48□□□□□ -1.21
CMTM1-203ENST00000333001 LCE2BO14633 110 aa7.48□□□□□ -1.21
CMTM1-203ENST00000333001 NUPR1O60356 82 aa7.48□□□□□ -1.21
CMTM1-203ENST00000333001 ZNF22P17026 224 aaPredicted RBP7.48□□□□□ -1.21
CMTM1-203ENST00000333001 COX17Q14061 63 aa7.47□□□□□ -1.21
CMTM1-203ENST00000333001 KRTAP11-1Q8IUC1 163 aa7.47□□□□□ -1.21
CMTM1-203ENST00000333001 TRAV12-1A0A0B4J245 112 aa7.46□□□□□ -1.22
CMTM1-203ENST00000333001 H0Y9J4 135 aa7.46□□□□□ -1.22
CMTM1-203ENST00000333001 TMEM170BQ5T4T1 132 aa7.46□□□□□ -1.22
CMTM1-203ENST00000333001 MRPL55Q7Z7F7 128 aaKnown RBP7.46□□□□□ -1.22
CMTM1-203ENST00000333001 IFI27L1Q96BM0 104 aa7.46□□□□□ -1.22
CMTM1-203ENST00000333001 CHTOPQ9Y3Y2 248 aaKnown RBP7.46□□□□□ -1.22
CMTM1-203ENST00000333001 HSBP1O75506 76 aa7.45□□□□□ -1.22
CMTM1-203ENST00000333001 C11orf86A6NJI1 115 aa7.44□□□□□ -1.22
CMTM1-203ENST00000333001 CBLN2Q8IUK8 224 aa7.44□□□□□ -1.22
CMTM1-203ENST00000333001 IGLV5-37A0A075B6J1 123 aa7.43□□□□□ -1.22
CMTM1-203ENST00000333001 ZNF861PO60384 105 aa7.43□□□□□ -1.22
CMTM1-203ENST00000333001 PFN2P35080 140 aa7.43□□□□□ -1.22
CMTM1-203ENST00000333001 NKAPP1Q8N9T2 125 aa7.43□□□□□ -1.22
CMTM1-203ENST00000333001 ERG28Q9UKR5 140 aa7.43□□□□□ -1.22
CMTM1-203ENST00000333001 IGLV1-50A0A075B6I6 118 aa7.42□□□□□ -1.22
CMTM1-203ENST00000333001 TRGC2P03986 189 aa7.42□□□□□ -1.22
CMTM1-203ENST00000333001 RPL28P46779 137 aaKnown RBP7.42□□□□□ -1.22
CMTM1-203ENST00000333001 RPL24P83731 157 aaKnown RBP7.42□□□□□ -1.22
CMTM1-203ENST00000333001 LINC00167Q96N53 147 aa7.42□□□□□ -1.22
CMTM1-203ENST00000333001 BCE1O60756 84 aa7.41□□□□□ -1.22
CMTM1-203ENST00000333001 SLC7A5P1Q8MH63 180 aa7.41□□□□□ -1.22
CMTM1-203ENST00000333001 TMEM223A0PJW6 202 aa7.4□□□□□ -1.22
CMTM1-203ENST00000333001 RPL13AP40429 203 aaKnown RBP7.4□□□□□ -1.22
CMTM1-203ENST00000333001 FAM19A2Q8N3H0 131 aa7.4□□□□□ -1.22
CMTM1-203ENST00000333001 RPL37AP8A6NKH3 93 aa7.39□□□□□ -1.23
CMTM1-203ENST00000333001 LINC00587B1AMM8 73 aa7.39□□□□□ -1.23
CMTM1-203ENST00000333001 LEPROTL1O95214 131 aa7.39□□□□□ -1.23
CMTM1-203ENST00000333001 ZNF625Q96I27 306 aaPredicted RBP7.39□□□□□ -1.23
CMTM1-203ENST00000333001 SND1-IT1Q9HBX3 110 aa7.39□□□□□ -1.23
CMTM1-203ENST00000333001 PRR26Q8N8Z3 221 aa7.38□□□□□ -1.23
CMTM1-203ENST00000333001 HSPB8Q9UJY1 196 aa7.38□□□□□ -1.23
CMTM1-203ENST00000333001 TMA7Q9Y2S6 64 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms