RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TRBV10-2A0A0K0K1G8 114 aa11.14□□□□□ -0.63
PDGFB-201ENST00000331163 PFN2P35080 140 aa11.14□□□□□ -0.63
PDGFB-201ENST00000331163 RPL13AP40429 203 aaKnown RBP11.14□□□□□ -0.63
PDGFB-201ENST00000331163 TIMM17AQ99595 171 aa11.14□□□□□ -0.63
PDGFB-201ENST00000331163 TRBV6-8A0A0A6YYG3 113 aa11.14□□□□□ -0.63
PDGFB-201ENST00000331163 TRBV6-4A0A1B0GX49 114 aa11.14□□□□□ -0.63
PDGFB-201ENST00000331163 TMEM223A0PJW6 202 aa11.14□□□□□ -0.63
PDGFB-201ENST00000331163 ADAMTSL4-AS1Q5T5F5 129 aa11.14□□□□□ -0.63
PDGFB-201ENST00000331163 NTM-AS1Q6ZSK4 140 aa11.14□□□□□ -0.63
PDGFB-201ENST00000331163 TRBV10-1A0A0K0K1A3 114 aa11.13□□□□□ -0.63
PDGFB-201ENST00000331163 AMELXQ99217 191 aa11.13□□□□□ -0.63
PDGFB-201ENST00000331163 IGKV2D-24A0A075B6R9 120 aa11.13□□□□□ -0.63
PDGFB-201ENST00000331163 DNAJC30Q96LL9 226 aa11.13□□□□□ -0.63
PDGFB-201ENST00000331163 LECT2O14960 151 aa11.12□□□□□ -0.63
PDGFB-201ENST00000331163 FAM236AA0A1B0GUQ0 79 aa11.12□□□□□ -0.63
PDGFB-201ENST00000331163 FAM236BA0A1B0GV22 79 aa11.12□□□□□ -0.63
PDGFB-201ENST00000331163 CDKN2A-AS1Q9UH64 79 aa11.12□□□□□ -0.63
PDGFB-201ENST00000331163 H7C423 109 aa11.12□□□□□ -0.63
PDGFB-201ENST00000331163 M0R2N4 97 aa11.11□□□□□ -0.63
PDGFB-201ENST00000331163 A8MTW9 85 aa11.11□□□□□ -0.63
PDGFB-201ENST00000331163 C6orf226Q5I0X4 101 aa11.11□□□□□ -0.63
PDGFB-201ENST00000331163 A0A0B4J2C4 111 aa11.1□□□□□ -0.63
PDGFB-201ENST00000331163 TRBV6-5A0A0K0K1A5 114 aa11.1□□□□□ -0.63
PDGFB-201ENST00000331163 CHCHD7Q9BUK0 85 aa11.09□□□□□ -0.63
PDGFB-201ENST00000331163 SS18Q15532 418 aa11.08□□□□□ -0.64
PDGFB-201ENST00000331163 WFDC10BQ8IUB3 73 aa11.08□□□□□ -0.64
PDGFB-201ENST00000331163 UBE2D4Q9Y2X8 147 aa11.07□□□□□ -0.64
PDGFB-201ENST00000331163 LINC00158P58513 81 aa11.07□□□□□ -0.64
PDGFB-201ENST00000331163 CCL18P55774 89 aa11.06□□□□□ -0.64
PDGFB-201ENST00000331163 C9orf153Q5TBE3 101 aa11.06□□□□□ -0.64
PDGFB-201ENST00000331163 SPANXA1Q9NS26 97 aa11.06□□□□□ -0.64
PDGFB-201ENST00000331163 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
PDGFB-201ENST00000331163 PSCAO43653 123 aa11.05□□□□□ -0.64
PDGFB-201ENST00000331163 HIGD2BQ4VC39 106 aa11.05□□□□□ -0.64
PDGFB-201ENST00000331163 KLK5Q9Y337 293 aaPredicted RBP11.05□□□□□ -0.64
PDGFB-201ENST00000331163 TRBV30A0A0K0K1B3 111 aa11.04□□□□□ -0.64
PDGFB-201ENST00000331163 COX6A2Q02221 97 aa11.04□□□□□ -0.64
PDGFB-201ENST00000331163 PPDPFQ9H3Y8 114 aa11.04□□□□□ -0.64
PDGFB-201ENST00000331163 Q9H8V8 135 aa11.04□□□□□ -0.64
PDGFB-201ENST00000331163 EGFEM1PQ0D2K5 195 aa11.03□□□□□ -0.64
PDGFB-201ENST00000331163 REG3AQ06141 175 aa11.03□□□□□ -0.64
PDGFB-201ENST00000331163 GAGE2AQ6NT46 116 aa11.02□□□□□ -0.65
PDGFB-201ENST00000331163 OR13C6PQ8NH95 151 aa11.02□□□□□ -0.65
PDGFB-201ENST00000331163 M0QXV9 152 aa11.02□□□□□ -0.65
PDGFB-201ENST00000331163 EDA2RQ9HAV5 297 aa11.01□□□□□ -0.65
PDGFB-201ENST00000331163 IGHV1-58A0A0C4DH39 117 aa11□□□□□ -0.65
PDGFB-201ENST00000331163 LOC107984640A0A0U1RRK4 108 aa11□□□□□ -0.65
PDGFB-201ENST00000331163 MIAQ16674 131 aa11□□□□□ -0.65
PDGFB-201ENST00000331163 TRAV10A0A0B4J240 114 aa11□□□□□ -0.65
PDGFB-201ENST00000331163 H3BT86 120 aa10.99□□□□□ -0.65
PDGFB-201ENST00000331163 CIRBPQ14011 172 aaKnown RBP10.99□□□□□ -0.65
PDGFB-201ENST00000331163 ESRGQ1W209 222 aa10.99□□□□□ -0.65
PDGFB-201ENST00000331163 CDC42SE2Q9NRR3 84 aa10.99□□□□□ -0.65
PDGFB-201ENST00000331163 LST1O00453 97 aa10.99□□□□□ -0.65
PDGFB-201ENST00000331163 CHCHD10Q8WYQ3 142 aaPredicted RBP10.98□□□□□ -0.65
PDGFB-201ENST00000331163 C1orf43Q9BWL3 253 aa10.98□□□□□ -0.65
PDGFB-201ENST00000331163 HERVK_113P63121 156 aa10.98□□□□□ -0.65
PDGFB-201ENST00000331163 LYPD5Q6UWN5 251 aa10.97□□□□□ -0.65
PDGFB-201ENST00000331163 LITAFQ99732 161 aa10.97□□□□□ -0.65
PDGFB-201ENST00000331163 PIK3CD-AS1Q5SR53 167 aa10.96□□□□□ -0.65
PDGFB-201ENST00000331163 LINC00242Q5T6M2 205 aa10.96□□□□□ -0.65
PDGFB-201ENST00000331163 BAALC-AS2P0C853 105 aa10.96□□□□□ -0.66
PDGFB-201ENST00000331163 ZNF561-AS1K7EIQ3 104 aa10.96□□□□□ -0.66
PDGFB-201ENST00000331163 Q6Q795 121 aa10.96□□□□□ -0.66
PDGFB-201ENST00000331163 IL17DQ8TAD2 202 aa10.96□□□□□ -0.66
PDGFB-201ENST00000331163 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.94□□□□□ -0.66
PDGFB-201ENST00000331163 IGKV3D-7A0A0C4DH55 119 aa10.94□□□□□ -0.66
PDGFB-201ENST00000331163 LINC00959A0A1B0GUT2 108 aa10.94□□□□□ -0.66
PDGFB-201ENST00000331163 COX7A2LO14548 114 aa10.94□□□□□ -0.66
PDGFB-201ENST00000331163 C9orf116Q5BN46 136 aaPredicted RBP10.93□□□□□ -0.66
PDGFB-201ENST00000331163 SMCR5Q8TEV8 140 aa10.93□□□□□ -0.66
PDGFB-201ENST00000331163 LELP1Q5T871 98 aa10.92□□□□□ -0.66
PDGFB-201ENST00000331163 LY6G6CO95867 125 aa10.92□□□□□ -0.66
PDGFB-201ENST00000331163 MRPS36P82909 103 aaKnown RBP10.92□□□□□ -0.66
PDGFB-201ENST00000331163 SDIM1Q6ZPB5 146 aa10.91□□□□□ -0.66
PDGFB-201ENST00000331163 LINC00308Q8TCZ7 52 aa10.91□□□□□ -0.66
PDGFB-201ENST00000331163 SPANXDQ9BXN6 97 aa10.9□□□□□ -0.66
PDGFB-201ENST00000331163 SPANXCQ9NY87 97 aa10.9□□□□□ -0.66
PDGFB-201ENST00000331163 WIPF1O43516 503 aa10.89□□□□□ -0.67
PDGFB-201ENST00000331163 C6orf223Q8N319 242 aa10.89□□□□□ -0.67
PDGFB-201ENST00000331163 PYGO1Q9Y3Y4 419 aa10.89□□□□□ -0.67
PDGFB-201ENST00000331163 hADV29S1A0JD25 119 aa10.89□□□□□ -0.67
PDGFB-201ENST00000331163 DNAL4O96015 105 aa10.88□□□□□ -0.67
PDGFB-201ENST00000331163 SPAG11BQ08648 103 aa10.88□□□□□ -0.67
PDGFB-201ENST00000331163 COX7B2Q8TF08 81 aa10.88□□□□□ -0.67
PDGFB-201ENST00000331163 XAGE1AQ9HD64 81 aa10.88□□□□□ -0.67
PDGFB-201ENST00000331163 TINCRA0A1B0GVN0 87 aa10.88□□□□□ -0.67
PDGFB-201ENST00000331163 TIRAPP58753 221 aa10.88□□□□□ -0.67
PDGFB-201ENST00000331163 CAMK2N2Q96S95 79 aa10.87□□□□□ -0.67
PDGFB-201ENST00000331163 TMEM126AQ9H061 195 aa10.87□□□□□ -0.67
PDGFB-201ENST00000331163 C14orf132Q9NPU4 83 aa10.87□□□□□ -0.67
PDGFB-201ENST00000331163 C3orf22Q8N5N4 141 aa10.86□□□□□ -0.67
PDGFB-201ENST00000331163 TM2D3Q9BRN9 247 aa10.86□□□□□ -0.67
PDGFB-201ENST00000331163 B9D2Q9BPU9 175 aa10.86□□□□□ -0.67
PDGFB-201ENST00000331163 A0A087WVE0 104 aa10.86□□□□□ -0.67
PDGFB-201ENST00000331163 SOSTDC1Q6X4U4 206 aa10.86□□□□□ -0.67
PDGFB-201ENST00000331163 FAM104AQ969W3 186 aa10.86□□□□□ -0.67
PDGFB-201ENST00000331163 FAM218AQ96MZ4 157 aa10.86□□□□□ -0.67
PDGFB-201ENST00000331163 LINC00643Q86TS7 51 aa10.85□□□□□ -0.67
PDGFB-201ENST00000331163 HIST1H4AP62805 103 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms