RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 C3orf84H3BNL1 204 aa8.03□□□□□ -1.12
COL4A5-201ENST00000328300 IGLV5-39A0A0G2JS06 123 aa8.03□□□□□ -1.12
COL4A5-201ENST00000328300 C1orf195Q5TG92 126 aa8.03□□□□□ -1.12
COL4A5-201ENST00000328300 IGLV5-52A0A0A0MRZ9 124 aa8.03□□□□□ -1.12
COL4A5-201ENST00000328300 A0A096LNI7 61 aa8.02□□□□□ -1.13
COL4A5-201ENST00000328300 PLXNB1O43157 2135 aa8.02□□□□□ -1.13
COL4A5-201ENST00000328300 C10orf25Q5T742 122 aa8.02□□□□□ -1.13
COL4A5-201ENST00000328300 SMIM26A0A096LP01 95 aa8.02□□□□□ -1.13
COL4A5-201ENST00000328300 CCDC168Q8NDH2 2452 aa8.01□□□□□ -1.13
COL4A5-201ENST00000328300 HIVEP3Q5T1R4 2406 aa8.01□□□□□ -1.13
COL4A5-201ENST00000328300 Q8N814 137 aa8.01□□□□□ -1.13
COL4A5-201ENST00000328300 LINC00526Q96FQ7 95 aa8.01□□□□□ -1.13
COL4A5-201ENST00000328300 KRTAP24-1Q3LI83 254 aa8.01□□□□□ -1.13
COL4A5-201ENST00000328300 A8MTW9 85 aa8.01□□□□□ -1.13
COL4A5-201ENST00000328300 PRR15LQ9BU68 103 aa8.01□□□□□ -1.13
COL4A5-201ENST00000328300 A0A096LNT2 108 aa8.01□□□□□ -1.13
COL4A5-201ENST00000328300 X6R8D5 127 aa8.01□□□□□ -1.13
COL4A5-201ENST00000328300 IGLV5-45A0A087WSX0 123 aa8.01□□□□□ -1.13
COL4A5-201ENST00000328300 A6NED7 52 aa8.01□□□□□ -1.13
COL4A5-201ENST00000328300 ARHGAP32A7KAX9 2087 aa8□□□□□ -1.13
COL4A5-201ENST00000328300 TRBV10-3A0A0K0K1G6 114 aa8□□□□□ -1.13
COL4A5-201ENST00000328300 TSPEAR-AS2P59090 65 aa8□□□□□ -1.13
COL4A5-201ENST00000328300 HRCT1Q6UXD1 115 aa8□□□□□ -1.13
COL4A5-201ENST00000328300 C6orf223Q8N319 242 aa7.99□□□□□ -1.13
COL4A5-201ENST00000328300 PIEZO2Q9H5I5 2752 aa7.99□□□□□ -1.13
COL4A5-201ENST00000328300 K7ERS5 55 aa7.98□□□□□ -1.13
COL4A5-201ENST00000328300 PRR4Q16378 134 aa7.98□□□□□ -1.13
COL4A5-201ENST00000328300 NTM-AS1Q6ZSK4 140 aa7.98□□□□□ -1.13
COL4A5-201ENST00000328300 RPL37AP8A6NKH3 93 aa7.98□□□□□ -1.13
COL4A5-201ENST00000328300 WFDC13Q8IUB5 93 aa7.98□□□□□ -1.13
COL4A5-201ENST00000328300 COL27A1Q8IZC6 1860 aaPredicted RBP7.98□□□□□ -1.13
COL4A5-201ENST00000328300 WNK1Q9H4A3 2382 aa7.98□□□□□ -1.13
COL4A5-201ENST00000328300 SERP1Q9Y6X1 66 aa7.98□□□□□ -1.13
COL4A5-201ENST00000328300 CELA1Q9UNI1 258 aa7.97□□□□□ -1.13
COL4A5-201ENST00000328300 TRAV7A0A075B6U4 112 aa7.97□□□□□ -1.13
COL4A5-201ENST00000328300 LRCOL1A6NCL2 159 aa7.97□□□□□ -1.13
COL4A5-201ENST00000328300 IGHV3OR16-9A0A0B4J2B5 98 aa7.96□□□□□ -1.13
COL4A5-201ENST00000328300 TRBV7-6A0A0J9YX20 115 aa7.96□□□□□ -1.14
COL4A5-201ENST00000328300 ADAMTSL4-AS1Q5T5F5 129 aa7.95□□□□□ -1.14
COL4A5-201ENST00000328300 FAM30AQ9NZY2 134 aa7.95□□□□□ -1.14
COL4A5-201ENST00000328300 Q8N9L7 120 aa7.94□□□□□ -1.14
COL4A5-201ENST00000328300 Q8NAQ8 132 aa7.94□□□□□ -1.14
COL4A5-201ENST00000328300 A0A087WVE0 104 aa7.93□□□□□ -1.14
COL4A5-201ENST00000328300 C1orf137Q5JT78 98 aa7.93□□□□□ -1.14
COL4A5-201ENST00000328300 PPDPFQ9H3Y8 114 aa7.93□□□□□ -1.14
COL4A5-201ENST00000328300 A0A1B0GW54 56 aa7.93□□□□□ -1.14
COL4A5-201ENST00000328300 C9orf116Q5BN46 136 aaPredicted RBP7.93□□□□□ -1.14
COL4A5-201ENST00000328300 TET2Q6N021 2002 aaPredicted RBP7.93□□□□□ -1.14
COL4A5-201ENST00000328300 Q6ZRU5 148 aa7.93□□□□□ -1.14
COL4A5-201ENST00000328300 ANKRD11Q6UB99 2663 aaPredicted RBP7.92□□□□□ -1.14
COL4A5-201ENST00000328300 ESRGQ1W209 222 aa7.92□□□□□ -1.14
COL4A5-201ENST00000328300 LINC00575Q6W349 94 aa7.92□□□□□ -1.14
COL4A5-201ENST00000328300 MDFIQ99750 246 aa7.91□□□□□ -1.14
COL4A5-201ENST00000328300 SONP18583 2426 aaKnown RBP7.91□□□□□ -1.14
COL4A5-201ENST00000328300 SOSTDC1Q6X4U4 206 aa7.91□□□□□ -1.14
COL4A5-201ENST00000328300 CEP295Q9C0D2 2601 aa7.9□□□□□ -1.14
COL4A5-201ENST00000328300 IGLV9-49A0A0B4J1Y8 123 aa7.89□□□□□ -1.15
COL4A5-201ENST00000328300 SBSPONQ8IVN8 264 aa7.89□□□□□ -1.15
COL4A5-201ENST00000328300 DOPEY1Q5JWR5 2465 aa7.88□□□□□ -1.15
COL4A5-201ENST00000328300 GVQW2A0A096LPI5 108 aaPredicted RBP7.88□□□□□ -1.15
COL4A5-201ENST00000328300 LIMD2Q9BT23 127 aa7.88□□□□□ -1.15
COL4A5-201ENST00000328300 A0A087WYN8 130 aa7.88□□□□□ -1.15
COL4A5-201ENST00000328300 PMAIP1Q13794 54 aa7.88□□□□□ -1.15
COL4A5-201ENST00000328300 Q9BRP9 147 aa7.88□□□□□ -1.15
COL4A5-201ENST00000328300 C22orf24Q9Y442 160 aa7.87□□□□□ -1.15
COL4A5-201ENST00000328300 SPINK6Q6UWN8 80 aa7.86□□□□□ -1.15
COL4A5-201ENST00000328300 C19orf73Q9NVV2 129 aa7.86□□□□□ -1.15
COL4A5-201ENST00000328300 ZNF462Q96JM2 2506 aa7.85□□□□□ -1.15
COL4A5-201ENST00000328300 DNAH10OSP0CZ25 163 aa7.85□□□□□ -1.15
COL4A5-201ENST00000328300 NBDYA0A0U1RRE5 68 aa7.85□□□□□ -1.15
COL4A5-201ENST00000328300 Q8N3U1 123 aa7.85□□□□□ -1.15
COL4A5-201ENST00000328300 CSNK1G2-AS1Q8NCQ2 148 aa7.85□□□□□ -1.15
COL4A5-201ENST00000328300 LINC00337Q8N6G1 96 aa7.84□□□□□ -1.15
COL4A5-201ENST00000328300 LINC00208Q96KT6 92 aa7.84□□□□□ -1.15
COL4A5-201ENST00000328300 CDIP1Q9H305 208 aa7.84□□□□□ -1.15
COL4A5-201ENST00000328300 WWC2-AS2Q96NR7 200 aa7.84□□□□□ -1.16
COL4A5-201ENST00000328300 LINC00612Q8N6U2 182 aa7.83□□□□□ -1.16
COL4A5-201ENST00000328300 C6orf48Q9UBA6 75 aa7.83□□□□□ -1.16
COL4A5-201ENST00000328300 MYO9AB2RTY4 2548 aa7.83□□□□□ -1.16
COL4A5-201ENST00000328300 PRR3P79522 188 aaKnown RBP7.82□□□□□ -1.16
COL4A5-201ENST00000328300 SPATA3Q8NHX4 192 aa7.82□□□□□ -1.16
COL4A5-201ENST00000328300 SORL1Q92673 2214 aa7.82□□□□□ -1.16
COL4A5-201ENST00000328300 TRBV7-7A0A0K0K1E9 115 aa7.82□□□□□ -1.16
COL4A5-201ENST00000328300 KRTAP1-3Q8IUG1 177 aa7.81□□□□□ -1.16
COL4A5-201ENST00000328300 SMCR5Q8TEV8 140 aa7.8□□□□□ -1.16
COL4A5-201ENST00000328300 LINC00588Q9Y4M8 146 aa7.8□□□□□ -1.16
COL4A5-201ENST00000328300 C16orf90A8MZG2 172 aa7.8□□□□□ -1.16
COL4A5-201ENST00000328300 LINC00846Q9NV44 126 aa7.8□□□□□ -1.16
COL4A5-201ENST00000328300 PSPHP1O15172 72 aa7.8□□□□□ -1.16
COL4A5-201ENST00000328300 CXCL6P80162 114 aa7.8□□□□□ -1.16
COL4A5-201ENST00000328300 ELOF1P60002 83 aaKnown RBP7.79□□□□□ -1.16
COL4A5-201ENST00000328300 MYO18BQ8IUG5 2567 aa7.79□□□□□ -1.16
COL4A5-201ENST00000328300 TMEM254Q8TBM7 123 aa7.79□□□□□ -1.16
COL4A5-201ENST00000328300 ABCA2Q9BZC7 2435 aa7.79□□□□□ -1.16
COL4A5-201ENST00000328300 CIRBP-AS1Q8TBR5 109 aa7.78□□□□□ -1.16
COL4A5-201ENST00000328300 LINC00167Q96N53 147 aa7.78□□□□□ -1.16
COL4A5-201ENST00000328300 Q6ZVQ6 151 aa7.78□□□□□ -1.16
COL4A5-201ENST00000328300 LINC01547P58512 204 aaPredicted RBP7.77□□□□□ -1.17
COL4A5-201ENST00000328300 C2CD3Q4AC94 2353 aa7.77□□□□□ -1.17
COL4A5-201ENST00000328300 BCE1O60756 84 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms