RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 TRBV6-4A0A1B0GX49 114 aa13.24□□□□□ -0.29
LTBP3-202ENST00000322147 H7C423 109 aa13.24□□□□□ -0.29
LTBP3-202ENST00000322147 MRPS36P82909 103 aaKnown RBP13.23□□□□□ -0.29
LTBP3-202ENST00000322147 SCXQ7RTU7 201 aa13.23□□□□□ -0.29
LTBP3-202ENST00000322147 CDC42SE2Q9NRR3 84 aa13.23□□□□□ -0.29
LTBP3-202ENST00000322147 KIF25-AS1Q9Y6Z4 181 aa13.23□□□□□ -0.29
LTBP3-202ENST00000322147 SMG1Q96Q15 3661 aaKnown RBP13.23□□□□□ -0.29
LTBP3-202ENST00000322147 CCL18P55774 89 aa13.23□□□□□ -0.29
LTBP3-202ENST00000322147 RETNQ9HD89 108 aa13.23□□□□□ -0.29
LTBP3-202ENST00000322147 TIRAPP58753 221 aa13.22□□□□□ -0.29
LTBP3-202ENST00000322147 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.22□□□□□ -0.29
LTBP3-202ENST00000322147 CHCHD7Q9BUK0 85 aa13.22□□□□□ -0.29
LTBP3-202ENST00000322147 ETDCA0A1B0GVM5 59 aa13.21□□□□□ -0.29
LTBP3-202ENST00000322147 HILS1P60008 231 aa13.21□□□□□ -0.29
LTBP3-202ENST00000322147 AMELXQ99217 191 aa13.21□□□□□ -0.29
LTBP3-202ENST00000322147 LINC00959A0A1B0GUT2 108 aa13.2□□□□□ -0.3
LTBP3-202ENST00000322147 LINC00315P59091 139 aa13.2□□□□□ -0.3
LTBP3-202ENST00000322147 RELNP78509 3460 aa13.2□□□□□ -0.3
LTBP3-202ENST00000322147 M0QXV9 152 aa13.19□□□□□ -0.3
LTBP3-202ENST00000322147 C11orf45Q8TAV5 145 aa13.19□□□□□ -0.3
LTBP3-202ENST00000322147 TRAV23DV6A0A075B6W5 121 aa13.19□□□□□ -0.3
LTBP3-202ENST00000322147 EIF4EBP3O60516 100 aaPredicted RBP13.19□□□□□ -0.3
LTBP3-202ENST00000322147 DEFB131BA0A096LNP1 70 aa13.18□□□□□ -0.3
LTBP3-202ENST00000322147 NSD1Q96L73 2696 aaPredicted RBP13.18□□□□□ -0.3
LTBP3-202ENST00000322147 SMIM1B2RUZ4 78 aa13.18□□□□□ -0.3
LTBP3-202ENST00000322147 BRI3O95415 125 aa13.17□□□□□ -0.3
LTBP3-202ENST00000322147 SMIM11BQ8TCY0 68 aa13.16□□□□□ -0.3
LTBP3-202ENST00000322147 CELSR2Q9HCU4 2923 aa13.16□□□□□ -0.3
LTBP3-202ENST00000322147 IGKV2-28A0A075B6P5 120 aa13.16□□□□□ -0.3
LTBP3-202ENST00000322147 IGKV2D-28P01615 120 aa13.16□□□□□ -0.3
LTBP3-202ENST00000322147 RBM3P98179 157 aaKnown RBP13.16□□□□□ -0.3
LTBP3-202ENST00000322147 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.15□□□□□ -0.3
LTBP3-202ENST00000322147 DIRC1Q969H9 104 aa13.15□□□□□ -0.3
LTBP3-202ENST00000322147 ITPR2Q14571 2701 aa13.15□□□□□ -0.3
LTBP3-202ENST00000322147 UNQ6190/PRO20217Q6UXQ8 127 aa13.15□□□□□ -0.3
LTBP3-202ENST00000322147 LST1O00453 97 aa13.14□□□□□ -0.31
LTBP3-202ENST00000322147 IGLV1-51P01701 117 aa13.14□□□□□ -0.31
LTBP3-202ENST00000322147 IGHV4-30-4P0DP06 118 aa13.14□□□□□ -0.31
LTBP3-202ENST00000322147 IBA57-AS1B1ANH7 110 aa13.13□□□□□ -0.31
LTBP3-202ENST00000322147 BAHCC1Q9P281 2608 aa13.13□□□□□ -0.31
LTBP3-202ENST00000322147 CUBNO60494 3623 aa13.13□□□□□ -0.31
LTBP3-202ENST00000322147 CRYBG3Q68DQ2 2970 aa13.12□□□□□ -0.31
LTBP3-202ENST00000322147 KPRPQ5T749 579 aaPredicted RBP13.12□□□□□ -0.31
LTBP3-202ENST00000322147 HIGD2AQ9BW72 106 aa13.12□□□□□ -0.31
LTBP3-202ENST00000322147 A8MTW9 85 aa13.12□□□□□ -0.31
LTBP3-202ENST00000322147 LYRM9A8MSI8 78 aa13.11□□□□□ -0.31
LTBP3-202ENST00000322147 ACYP1P07311 99 aa13.11□□□□□ -0.31
LTBP3-202ENST00000322147 Q6ZQY7 126 aa13.1□□□□□ -0.31
LTBP3-202ENST00000322147 WFDC9Q8NEX5 89 aa13.1□□□□□ -0.31
LTBP3-202ENST00000322147 NANOS2P60321 138 aaKnown RBP13.1□□□□□ -0.31
LTBP3-202ENST00000322147 NF1P21359 2839 aa13.09□□□□□ -0.31
LTBP3-202ENST00000322147 PPDPFQ9H3Y8 114 aa13.09□□□□□ -0.31
LTBP3-202ENST00000322147 CXCL5P42830 114 aa13.09□□□□□ -0.31
LTBP3-202ENST00000322147 NREPQ16612 68 aa13.09□□□□□ -0.31
LTBP3-202ENST00000322147 FAM240AA0A1B0GVK7 77 aa13.08□□□□□ -0.32
LTBP3-202ENST00000322147 FHL2Q14192 279 aa13.08□□□□□ -0.32
LTBP3-202ENST00000322147 SPANXDQ9BXN6 97 aa13.08□□□□□ -0.32
LTBP3-202ENST00000322147 SMIM9A6NGZ8 99 aa13.08□□□□□ -0.32
LTBP3-202ENST00000322147 RMI2Q96E14 147 aa13.08□□□□□ -0.32
LTBP3-202ENST00000322147 LINC00643Q86TS7 51 aa13.07□□□□□ -0.32
LTBP3-202ENST00000322147 TMEM256-PLSCR3K7ERE1 68 aa13.07□□□□□ -0.32
LTBP3-202ENST00000322147 NTM-AS1Q6ZSK4 140 aa13.07□□□□□ -0.32
LTBP3-202ENST00000322147 C6orf223Q8N319 242 aa13.07□□□□□ -0.32
LTBP3-202ENST00000322147 CSMD1Q96PZ7 3565 aa13.07□□□□□ -0.32
LTBP3-202ENST00000322147 CYSRT1A8MQ03 144 aa13.07□□□□□ -0.32
LTBP3-202ENST00000322147 CD164L2Q6UWJ8 174 aa13.06□□□□□ -0.32
LTBP3-202ENST00000322147 FAM19A4Q96LR4 140 aa13.06□□□□□ -0.32
LTBP3-202ENST00000322147 COX7BP24311 80 aa13.06□□□□□ -0.32
LTBP3-202ENST00000322147 C11orf72Q8NBR9 251 aa13.05□□□□□ -0.32
LTBP3-202ENST00000322147 MIFP14174 115 aa13.05□□□□□ -0.32
LTBP3-202ENST00000322147 JMJD7-PLA2G4BH0Y9G9 81 aa13.05□□□□□ -0.32
LTBP3-202ENST00000322147 ENHOQ6UWT2 76 aa13.05□□□□□ -0.32
LTBP3-202ENST00000322147 C3orf22Q8N5N4 141 aa13.04□□□□□ -0.32
LTBP3-202ENST00000322147 RPL37AP8A6NKH3 93 aa13.04□□□□□ -0.32
LTBP3-202ENST00000322147 FAM19A5Q7Z5A7 132 aaPredicted RBP13.04□□□□□ -0.32
LTBP3-202ENST00000322147 FUSP35637 526 aaKnown RBP eCLIP13.04□□□□□ -0.32
LTBP3-202ENST00000322147 CDK2AP2O75956 126 aa13.03□□□□□ -0.32
LTBP3-202ENST00000322147 Q8N2B8 174 aa13.03□□□□□ -0.32
LTBP3-202ENST00000322147 C20orf197Q8N268 126 aa13.03□□□□□ -0.32
LTBP3-202ENST00000322147 Q8N3U1 123 aa13.03□□□□□ -0.32
LTBP3-202ENST00000322147 LITAFQ99732 161 aa13.03□□□□□ -0.32
LTBP3-202ENST00000322147 C3orf84H3BNL1 204 aa13.03□□□□□ -0.32
LTBP3-202ENST00000322147 TRBV7-7A0A0K0K1E9 115 aa13.02□□□□□ -0.32
LTBP3-202ENST00000322147 UQCRQO14949 82 aa13.02□□□□□ -0.32
LTBP3-202ENST00000322147 KLK5Q9Y337 293 aaPredicted RBP13.02□□□□□ -0.32
LTBP3-202ENST00000322147 Q6ZTC4 211 aa13.02□□□□□ -0.33
LTBP3-202ENST00000322147 A0A0J9YWU9 116 aa13.01□□□□□ -0.33
LTBP3-202ENST00000322147 BEAN1Q3B7T3 259 aa13.01□□□□□ -0.33
LTBP3-202ENST00000322147 A0A087WYN8 130 aa13□□□□□ -0.33
LTBP3-202ENST00000322147 IMUPQ9GZP8 106 aa13□□□□□ -0.33
LTBP3-202ENST00000322147 A0A087WVE0 104 aa13□□□□□ -0.33
LTBP3-202ENST00000322147 LOC107984640A0A0U1RRK4 108 aa13□□□□□ -0.33
LTBP3-202ENST00000322147 TIMM17BO60830 172 aa12.99□□□□□ -0.33
LTBP3-202ENST00000322147 M0R2N4 97 aa12.99□□□□□ -0.33
LTBP3-202ENST00000322147 ATOX1O00244 68 aa12.98□□□□□ -0.33
LTBP3-202ENST00000322147 SYCNQ0VAF6 134 aa12.98□□□□□ -0.33
LTBP3-202ENST00000322147 SVEP1Q4LDE5 3571 aa12.98□□□□□ -0.33
LTBP3-202ENST00000322147 J3KT08 172 aa12.97□□□□□ -0.33
LTBP3-202ENST00000322147 LINC00337Q8N6G1 96 aa12.97□□□□□ -0.33
LTBP3-202ENST00000322147 FBN2P35556 2912 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms