RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 GAGE2EQ4V326 116 aa13.59□□□□□ -0.23
AP3S1-201ENST00000316788 C9orf66Q5T8R8 295 aa13.59□□□□□ -0.23
AP3S1-201ENST00000316788 GAGE2DQ9UEU5 116 aa13.59□□□□□ -0.23
AP3S1-201ENST00000316788 IGKV2-28A0A075B6P5 120 aa13.58□□□□□ -0.24
AP3S1-201ENST00000316788 IGKV2D-28P01615 120 aa13.58□□□□□ -0.24
AP3S1-201ENST00000316788 LINC00158P58513 81 aa13.58□□□□□ -0.24
AP3S1-201ENST00000316788 SS18Q15532 418 aa13.58□□□□□ -0.24
AP3S1-201ENST00000316788 IGKV3OR2-268A0A0C4DH90 116 aa13.57□□□□□ -0.24
AP3S1-201ENST00000316788 C15orf53Q8NAA6 179 aa13.57□□□□□ -0.24
AP3S1-201ENST00000316788 DNHD1Q96M86 4753 aa13.57□□□□□ -0.24
AP3S1-201ENST00000316788 TRRAPQ9Y4A5 3859 aa13.57□□□□□ -0.24
AP3S1-201ENST00000316788 STAB1Q9NY15 2570 aa13.57□□□□□ -0.24
AP3S1-201ENST00000316788 ANK2Q01484 3957 aa13.57□□□□□ -0.24
AP3S1-201ENST00000316788 CCL18P55774 89 aa13.56□□□□□ -0.24
AP3S1-201ENST00000316788 LINC00337Q8N6G1 96 aa13.56□□□□□ -0.24
AP3S1-201ENST00000316788 Q8IZM0 81 aa13.56□□□□□ -0.24
AP3S1-201ENST00000316788 C5orf38Q86SI9 138 aa13.55□□□□□ -0.24
AP3S1-201ENST00000316788 H0YGX0 51 aa13.54□□□□□ -0.24
AP3S1-201ENST00000316788 BAALC-AS2P0C853 105 aa13.53□□□□□ -0.24
AP3S1-201ENST00000316788 WNK1Q9H4A3 2382 aa13.53□□□□□ -0.24
AP3S1-201ENST00000316788 FAM218AQ96MZ4 157 aa13.53□□□□□ -0.24
AP3S1-201ENST00000316788 PAX4O43316 350 aa13.51□□□□□ -0.25
AP3S1-201ENST00000316788 C6orf226Q5I0X4 101 aa13.51□□□□□ -0.25
AP3S1-201ENST00000316788 ANAPC13Q9BS18 74 aa13.51□□□□□ -0.25
AP3S1-201ENST00000316788 APOC4P55056 127 aa13.5□□□□□ -0.25
AP3S1-201ENST00000316788 SMIM11BQ8TCY0 68 aa13.5□□□□□ -0.25
AP3S1-201ENST00000316788 INAFM2P0DMQ5 153 aa13.5□□□□□ -0.25
AP3S1-201ENST00000316788 C22orf24Q9Y442 160 aa13.5□□□□□ -0.25
AP3S1-201ENST00000316788 TRBV7-7A0A0K0K1E9 115 aa13.49□□□□□ -0.25
AP3S1-201ENST00000316788 CXCL5P42830 114 aa13.49□□□□□ -0.25
AP3S1-201ENST00000316788 C3orf56Q8N813 242 aa13.49□□□□□ -0.25
AP3S1-201ENST00000316788 MALP21145 153 aa13.47□□□□□ -0.25
AP3S1-201ENST00000316788 XCL1P47992 114 aa13.47□□□□□ -0.25
AP3S1-201ENST00000316788 NDUFV3P56181 108 aaKnown RBP13.47□□□□□ -0.25
AP3S1-201ENST00000316788 CD164L2Q6UWJ8 174 aa13.47□□□□□ -0.25
AP3S1-201ENST00000316788 PFN2P35080 140 aa13.46□□□□□ -0.25
AP3S1-201ENST00000316788 COX17Q14061 63 aa13.46□□□□□ -0.25
AP3S1-201ENST00000316788 TTC32Q5I0X7 151 aa13.46□□□□□ -0.25
AP3S1-201ENST00000316788 SDIM1Q6ZPB5 146 aa13.46□□□□□ -0.25
AP3S1-201ENST00000316788 IMUPQ9GZP8 106 aa13.46□□□□□ -0.25
AP3S1-201ENST00000316788 CMYA5Q8N3K9 4069 aa13.45□□□□□ -0.26
AP3S1-201ENST00000316788 VWFP04275 2813 aa13.45□□□□□ -0.26
AP3S1-201ENST00000316788 DNAL4O96015 105 aa13.44□□□□□ -0.26
AP3S1-201ENST00000316788 NHLRC4P0CG21 123 aaPredicted RBP13.44□□□□□ -0.26
AP3S1-201ENST00000316788 MIFP14174 115 aa13.44□□□□□ -0.26
AP3S1-201ENST00000316788 NOTCH3Q9UM47 2321 aa13.44□□□□□ -0.26
AP3S1-201ENST00000316788 IGHV4-28A0A0C4DH34 117 aa13.43□□□□□ -0.26
AP3S1-201ENST00000316788 NDUFC2O95298 119 aa13.43□□□□□ -0.26
AP3S1-201ENST00000316788 KIAA0087Q14695 138 aa13.43□□□□□ -0.26
AP3S1-201ENST00000316788 DAD1P61803 113 aa13.42□□□□□ -0.26
AP3S1-201ENST00000316788 LINC00643Q86TS7 51 aa13.42□□□□□ -0.26
AP3S1-201ENST00000316788 SPATA3Q8NHX4 192 aa13.42□□□□□ -0.26
AP3S1-201ENST00000316788 ATP5G1P05496 136 aa13.42□□□□□ -0.26
AP3S1-201ENST00000316788 MUC7Q8TAX7 377 aa13.42□□□□□ -0.26
AP3S1-201ENST00000316788 A0A087WYN8 130 aa13.41□□□□□ -0.26
AP3S1-201ENST00000316788 A0A1B0GX51 115 aa13.41□□□□□ -0.26
AP3S1-201ENST00000316788 DEFB135Q30KP9 77 aa13.41□□□□□ -0.26
AP3S1-201ENST00000316788 KRTAP21-3Q3LHN1 58 aa13.41□□□□□ -0.26
AP3S1-201ENST00000316788 LINC00269Q8N2A0 174 aa13.4□□□□□ -0.26
AP3S1-201ENST00000316788 Q8NAQ8 132 aa13.4□□□□□ -0.26
AP3S1-201ENST00000316788 CHCHD10Q8WYQ3 142 aaPredicted RBP13.4□□□□□ -0.26
AP3S1-201ENST00000316788 OBSCN-AS1Q96MR7 158 aa13.4□□□□□ -0.26
AP3S1-201ENST00000316788 Q9HAA7 133 aa13.4□□□□□ -0.26
AP3S1-201ENST00000316788 CFAP161Q6P656 301 aa13.39□□□□□ -0.27
AP3S1-201ENST00000316788 WIPF1O43516 503 aa13.39□□□□□ -0.27
AP3S1-201ENST00000316788 REG3AQ06141 175 aa13.39□□□□□ -0.27
AP3S1-201ENST00000316788 A0A096LPF7 62 aa13.38□□□□□ -0.27
AP3S1-201ENST00000316788 CLPSL2Q6UWE3 100 aa13.38□□□□□ -0.27
AP3S1-201ENST00000316788 OR13C6PQ8NH95 151 aa13.37□□□□□ -0.27
AP3S1-201ENST00000316788 LINC00167Q96N53 147 aa13.37□□□□□ -0.27
AP3S1-201ENST00000316788 C11orf68Q9H3H3 251 aaKnown RBP13.37□□□□□ -0.27
AP3S1-201ENST00000316788 LELP1Q5T871 98 aa13.36□□□□□ -0.27
AP3S1-201ENST00000316788 ANGP03950 147 aaKnown RBP13.36□□□□□ -0.27
AP3S1-201ENST00000316788 SPART-AS1P0CW21 52 aa13.36□□□□□ -0.27
AP3S1-201ENST00000316788 WFDC9Q8NEX5 89 aa13.36□□□□□ -0.27
AP3S1-201ENST00000316788 KLK5Q9Y337 293 aaPredicted RBP13.35□□□□□ -0.27
AP3S1-201ENST00000316788 LECT2O14960 151 aa13.34□□□□□ -0.27
AP3S1-201ENST00000316788 SMCR5Q8TEV8 140 aa13.34□□□□□ -0.27
AP3S1-201ENST00000316788 TMEM126AQ9H061 195 aa13.33□□□□□ -0.28
AP3S1-201ENST00000316788 CELA1Q9UNI1 258 aa13.33□□□□□ -0.28
AP3S1-201ENST00000316788 PKD1L1Q8TDX9 2849 aa13.32□□□□□ -0.28
AP3S1-201ENST00000316788 NANOS2P60321 138 aaKnown RBP13.32□□□□□ -0.28
AP3S1-201ENST00000316788 DEFB4AO15263 64 aa13.31□□□□□ -0.28
AP3S1-201ENST00000316788 PRR34Q9NV39 138 aa13.31□□□□□ -0.28
AP3S1-201ENST00000316788 ORMDL1Q9P0S3 153 aa13.31□□□□□ -0.28
AP3S1-201ENST00000316788 GAGE2AQ6NT46 116 aa13.3□□□□□ -0.28
AP3S1-201ENST00000316788 A0A0J9YWU9 116 aa13.28□□□□□ -0.28
AP3S1-201ENST00000316788 IGHV4-30-4P0DP06 118 aa13.28□□□□□ -0.28
AP3S1-201ENST00000316788 IGLV10-54A0A075B6I4 117 aa13.27□□□□□ -0.29
AP3S1-201ENST00000316788 Q8N3U1 123 aa13.27□□□□□ -0.29
AP3S1-201ENST00000316788 GVQW2A0A096LPI5 108 aaPredicted RBP13.26□□□□□ -0.29
AP3S1-201ENST00000316788 SPAG11BQ08648 103 aa13.25□□□□□ -0.29
AP3S1-201ENST00000316788 Q8N814 137 aa13.25□□□□□ -0.29
AP3S1-201ENST00000316788 H3BNG1 76 aa13.24□□□□□ -0.29
AP3S1-201ENST00000316788 C9orf129Q5T035 196 aaKnown RBP13.24□□□□□ -0.29
AP3S1-201ENST00000316788 C14orf132Q9NPU4 83 aa13.24□□□□□ -0.29
AP3S1-201ENST00000316788 JMJD7-PLA2G4BH0Y9G9 81 aa13.23□□□□□ -0.29
AP3S1-201ENST00000316788 CCDC179H3BU77 68 aa13.22□□□□□ -0.29
AP3S1-201ENST00000316788 FAM236AA0A1B0GUQ0 79 aa13.22□□□□□ -0.29
AP3S1-201ENST00000316788 FAM236BA0A1B0GV22 79 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms