RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 ZFAND3Q9H8U3 227 aa8.47□□□□□ -1.05
LDLRAD3-201ENST00000315571 WNK1Q9H4A3 2382 aa8.47□□□□□ -1.05
LDLRAD3-201ENST00000315571 SCXQ7RTU7 201 aa8.46□□□□□ -1.05
LDLRAD3-201ENST00000315571 H0YGX0 51 aa8.46□□□□□ -1.06
LDLRAD3-201ENST00000315571 ZFAND2AQ8N6M9 145 aa8.46□□□□□ -1.06
LDLRAD3-201ENST00000315571 SPTSSBQ8NFR3 76 aa8.46□□□□□ -1.06
LDLRAD3-201ENST00000315571 TMEM89A2RUT3 159 aa8.46□□□□□ -1.06
LDLRAD3-201ENST00000315571 ATP6V0E1O15342 81 aa8.46□□□□□ -1.06
LDLRAD3-201ENST00000315571 IGHV3-11P01762 117 aa8.46□□□□□ -1.06
LDLRAD3-201ENST00000315571 MAST4O15021 2626 aa8.45□□□□□ -1.06
LDLRAD3-201ENST00000315571 C9orf129Q5T035 196 aaKnown RBP8.45□□□□□ -1.06
LDLRAD3-201ENST00000315571 G3V318 75 aa8.45□□□□□ -1.06
LDLRAD3-201ENST00000315571 PSPHP1O15172 72 aa8.45□□□□□ -1.06
LDLRAD3-201ENST00000315571 MIFP14174 115 aa8.45□□□□□ -1.06
LDLRAD3-201ENST00000315571 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
LDLRAD3-201ENST00000315571 MRPL53Q96EL3 112 aaKnown RBP8.45□□□□□ -1.06
LDLRAD3-201ENST00000315571 ESM1Q9NQ30 184 aa8.45□□□□□ -1.06
LDLRAD3-201ENST00000315571 LENEPQ9Y5L5 61 aa8.45□□□□□ -1.06
LDLRAD3-201ENST00000315571 MXRA5Q9NR99 2828 aa8.43□□□□□ -1.06
LDLRAD3-201ENST00000315571 M0QY20 66 aa8.43□□□□□ -1.06
LDLRAD3-201ENST00000315571 NDUFA1O15239 70 aa8.43□□□□□ -1.06
LDLRAD3-201ENST00000315571 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
LDLRAD3-201ENST00000315571 FN1P02751 2386 aaKnown RBP8.43□□□□□ -1.06
LDLRAD3-201ENST00000315571 SMIM11BQ8TCY0 68 aa8.43□□□□□ -1.06
LDLRAD3-201ENST00000315571 IGHV3-16A0A0C4DH30 117 aa8.42□□□□□ -1.06
LDLRAD3-201ENST00000315571 JMJD7-PLA2G4BH0Y9G9 81 aa8.42□□□□□ -1.06
LDLRAD3-201ENST00000315571 NDUFC1O43677 76 aa8.42□□□□□ -1.06
LDLRAD3-201ENST00000315571 NSD1Q96L73 2696 aaPredicted RBP8.42□□□□□ -1.06
LDLRAD3-201ENST00000315571 DYNLRB2Q8TF09 96 aa8.42□□□□□ -1.06
LDLRAD3-201ENST00000315571 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
LDLRAD3-201ENST00000315571 LYPD5Q6UWN5 251 aa8.41□□□□□ -1.06
LDLRAD3-201ENST00000315571 FAM110DQ8TAY7 271 aaPredicted RBP8.41□□□□□ -1.06
LDLRAD3-201ENST00000315571 ZNF702PQ9H963 129 aa8.41□□□□□ -1.06
LDLRAD3-201ENST00000315571 SPINK13Q1W4C9 94 aa8.41□□□□□ -1.06
LDLRAD3-201ENST00000315571 ANK3Q12955 4377 aaKnown RBP8.4□□□□□ -1.06
LDLRAD3-201ENST00000315571 MED14OSP0DP75 135 aa8.4□□□□□ -1.06
LDLRAD3-201ENST00000315571 ATP5EP56381 51 aaPredicted RBP8.4□□□□□ -1.07
LDLRAD3-201ENST00000315571 TRAV10A0A0B4J240 114 aa8.39□□□□□ -1.07
LDLRAD3-201ENST00000315571 TRBV6-5A0A0K0K1A5 114 aa8.39□□□□□ -1.07
LDLRAD3-201ENST00000315571 ESRGQ1W209 222 aa8.39□□□□□ -1.07
LDLRAD3-201ENST00000315571 UBE2L6O14933 153 aa8.39□□□□□ -1.07
LDLRAD3-201ENST00000315571 PROK1P58294 105 aa8.39□□□□□ -1.07
LDLRAD3-201ENST00000315571 Q6ZTI0 123 aa8.39□□□□□ -1.07
LDLRAD3-201ENST00000315571 CD164Q04900 197 aa8.38□□□□□ -1.07
LDLRAD3-201ENST00000315571 TEP1Q99973 2627 aaKnown RBP8.38□□□□□ -1.07
LDLRAD3-201ENST00000315571 PF4P02776 101 aa8.38□□□□□ -1.07
LDLRAD3-201ENST00000315571 LINC00315P59091 139 aa8.38□□□□□ -1.07
LDLRAD3-201ENST00000315571 Q8N3U1 123 aa8.38□□□□□ -1.07
LDLRAD3-201ENST00000315571 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
LDLRAD3-201ENST00000315571 RHPN1-AS1Q9BWJ2 59 aa8.37□□□□□ -1.07
LDLRAD3-201ENST00000315571 KIF25-AS1Q9Y6Z4 181 aa8.37□□□□□ -1.07
LDLRAD3-201ENST00000315571 MUC4Q99102 2169 aa8.37□□□□□ -1.07
LDLRAD3-201ENST00000315571 LINC00467Q9BRT7 94 aa8.37□□□□□ -1.07
LDLRAD3-201ENST00000315571 C16orf95Q9H693 158 aa8.37□□□□□ -1.07
LDLRAD3-201ENST00000315571 KHDC1LQ5JSQ8 128 aa8.36□□□□□ -1.07
LDLRAD3-201ENST00000315571 JMJD1CQ15652 2540 aa8.36□□□□□ -1.07
LDLRAD3-201ENST00000315571 PRR4Q16378 134 aa8.36□□□□□ -1.07
LDLRAD3-201ENST00000315571 PLAC8L1A1L4L8 177 aa8.36□□□□□ -1.07
LDLRAD3-201ENST00000315571 H3BUA1 57 aa8.36□□□□□ -1.07
LDLRAD3-201ENST00000315571 LINC00337Q8N6G1 96 aa8.36□□□□□ -1.07
LDLRAD3-201ENST00000315571 TMEM256-PLSCR3K7ERE1 68 aa8.35□□□□□ -1.07
LDLRAD3-201ENST00000315571 IGHV3OR16-12A0A075B7B8 117 aa8.35□□□□□ -1.07
LDLRAD3-201ENST00000315571 UNQ9165/PRO28630Q6UXU0 137 aa8.35□□□□□ -1.07
LDLRAD3-201ENST00000315571 TMEM254Q8TBM7 123 aa8.35□□□□□ -1.07
LDLRAD3-201ENST00000315571 TM2D3Q9BRN9 247 aa8.35□□□□□ -1.07
LDLRAD3-201ENST00000315571 KLKP1Q107X0 134 aa8.34□□□□□ -1.07
LDLRAD3-201ENST00000315571 C10orf99Q6UWK7 81 aa8.34□□□□□ -1.07
LDLRAD3-201ENST00000315571 LINC01006Q8NI28 216 aa8.34□□□□□ -1.07
LDLRAD3-201ENST00000315571 COX6A2Q02221 97 aa8.34□□□□□ -1.07
LDLRAD3-201ENST00000315571 CFHR3Q02985 330 aa8.34□□□□□ -1.07
LDLRAD3-201ENST00000315571 NREPQ16612 68 aa8.34□□□□□ -1.07
LDLRAD3-201ENST00000315571 IGLV1-40P01703 118 aa8.34□□□□□ -1.08
LDLRAD3-201ENST00000315571 BEAN1Q3B7T3 259 aa8.34□□□□□ -1.08
LDLRAD3-201ENST00000315571 USMG5Q96IX5 58 aa8.34□□□□□ -1.08
LDLRAD3-201ENST00000315571 TRBV10-1A0A0K0K1A3 114 aa8.33□□□□□ -1.08
LDLRAD3-201ENST00000315571 NANOS2P60321 138 aaKnown RBP8.33□□□□□ -1.08
LDLRAD3-201ENST00000315571 CCDC140Q96MF4 163 aa8.33□□□□□ -1.08
LDLRAD3-201ENST00000315571 FAM229BQ4G0N7 80 aa8.32□□□□□ -1.08
LDLRAD3-201ENST00000315571 C4orf48Q5BLP8 95 aa8.32□□□□□ -1.08
LDLRAD3-201ENST00000315571 C11orf44Q8N8P7 122 aa8.32□□□□□ -1.08
LDLRAD3-201ENST00000315571 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.31□□□□□ -1.08
LDLRAD3-201ENST00000315571 SETD2Q9BYW2 2564 aaPredicted RBP8.31□□□□□ -1.08
LDLRAD3-201ENST00000315571 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
LDLRAD3-201ENST00000315571 LINC01547P58512 204 aaPredicted RBP8.31□□□□□ -1.08
LDLRAD3-201ENST00000315571 KLK9Q2XQG4 91 aa8.31□□□□□ -1.08
LDLRAD3-201ENST00000315571 C22orf24Q9Y442 160 aa8.3□□□□□ -1.08
LDLRAD3-201ENST00000315571 NIPBLQ6KC79 2804 aaeCLIP8.3□□□□□ -1.08
LDLRAD3-201ENST00000315571 STHQ8IWL8 128 aa8.3□□□□□ -1.08
LDLRAD3-201ENST00000315571 C11orf72Q8NBR9 251 aa8.3□□□□□ -1.08
LDLRAD3-201ENST00000315571 NF1P21359 2839 aa8.29□□□□□ -1.08
LDLRAD3-201ENST00000315571 ZFHX3Q15911 3703 aa8.29□□□□□ -1.08
LDLRAD3-201ENST00000315571 BPY2O14599 106 aa8.29□□□□□ -1.08
LDLRAD3-201ENST00000315571 PRYO14603 147 aa8.29□□□□□ -1.08
LDLRAD3-201ENST00000315571 UBE2E2Q96LR5 201 aa8.28□□□□□ -1.08
LDLRAD3-201ENST00000315571 TRBV10-3A0A0K0K1G6 114 aa8.28□□□□□ -1.08
LDLRAD3-201ENST00000315571 ZNF561-AS1K7EIQ3 104 aa8.28□□□□□ -1.08
LDLRAD3-201ENST00000315571 CCL18P55774 89 aa8.27□□□□□ -1.08
LDLRAD3-201ENST00000315571 LINC00242Q5T6M2 205 aa8.27□□□□□ -1.08
LDLRAD3-201ENST00000315571 SMIM1B2RUZ4 78 aa8.27□□□□□ -1.09
LDLRAD3-201ENST00000315571 CHKB-CPT1BH3BT56 60 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms