RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 RPL37AP8A6NKH3 93 aa9.8□□□□□ -0.84
SPAST-201ENST00000315285 NANOS2P60321 138 aaKnown RBP9.8□□□□□ -0.84
SPAST-201ENST00000315285 FAM19A4Q96LR4 140 aa9.8□□□□□ -0.84
SPAST-201ENST00000315285 C16orf95Q9H693 158 aa9.8□□□□□ -0.84
SPAST-201ENST00000315285 PTPRBP23467 1997 aa9.8□□□□□ -0.84
SPAST-201ENST00000315285 EGFEM1PQ0D2K5 195 aa9.79□□□□□ -0.84
SPAST-201ENST00000315285 A0A0J9YWU9 116 aa9.78□□□□□ -0.84
SPAST-201ENST00000315285 TRBV10-3A0A0K0K1G6 114 aa9.78□□□□□ -0.84
SPAST-201ENST00000315285 IGKV4-1P06312 121 aa9.78□□□□□ -0.84
SPAST-201ENST00000315285 C11orf72Q8NBR9 251 aa9.78□□□□□ -0.84
SPAST-201ENST00000315285 BRK1Q8WUW1 75 aa9.78□□□□□ -0.84
SPAST-201ENST00000315285 SNURFQ9Y675 71 aa9.78□□□□□ -0.84
SPAST-201ENST00000315285 FAM19A3Q7Z5A8 133 aa9.78□□□□□ -0.84
SPAST-201ENST00000315285 WFDC10BQ8IUB3 73 aa9.77□□□□□ -0.84
SPAST-201ENST00000315285 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.85
SPAST-201ENST00000315285 A0A1B0GUV1 79 aa9.77□□□□□ -0.85
SPAST-201ENST00000315285 MPLKIPQ8TAP9 179 aa9.76□□□□□ -0.85
SPAST-201ENST00000315285 NDUFC1O43677 76 aa9.76□□□□□ -0.85
SPAST-201ENST00000315285 PPDPFQ9H3Y8 114 aa9.76□□□□□ -0.85
SPAST-201ENST00000315285 M0QXV9 152 aa9.75□□□□□ -0.85
SPAST-201ENST00000315285 RETNQ9HD89 108 aa9.75□□□□□ -0.85
SPAST-201ENST00000315285 PCSK5Q92824 1860 aa9.75□□□□□ -0.85
SPAST-201ENST00000315285 A0A087WVE0 104 aa9.74□□□□□ -0.85
SPAST-201ENST00000315285 IGLV5-39A0A0G2JS06 123 aa9.74□□□□□ -0.85
SPAST-201ENST00000315285 Q8N2B8 174 aa9.73□□□□□ -0.85
SPAST-201ENST00000315285 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
SPAST-201ENST00000315285 LINC00337Q8N6G1 96 aa9.73□□□□□ -0.85
SPAST-201ENST00000315285 NDUFC2-KCTD14E9PQ53 114 aa9.73□□□□□ -0.85
SPAST-201ENST00000315285 ANKRD17O75179 2603 aaKnown RBP9.72□□□□□ -0.85
SPAST-201ENST00000315285 ATP5EP56381 51 aaPredicted RBP9.72□□□□□ -0.85
SPAST-201ENST00000315285 Q6ZTC4 211 aa9.72□□□□□ -0.85
SPAST-201ENST00000315285 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
SPAST-201ENST00000315285 PCNTO95613 3336 aa9.72□□□□□ -0.85
SPAST-201ENST00000315285 CDIP1Q9H305 208 aa9.71□□□□□ -0.85
SPAST-201ENST00000315285 ACANP16112 2415 aa9.71□□□□□ -0.85
SPAST-201ENST00000315285 COL27A1Q8IZC6 1860 aaPredicted RBP9.7□□□□□ -0.86
SPAST-201ENST00000315285 LINC01561Q8N1V8 128 aa9.69□□□□□ -0.86
SPAST-201ENST00000315285 LRCOL1A6NCL2 159 aa9.68□□□□□ -0.86
SPAST-201ENST00000315285 SMCPP49901 116 aaPredicted RBP9.68□□□□□ -0.86
SPAST-201ENST00000315285 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
SPAST-201ENST00000315285 IGHV3OR16-9A0A0B4J2B5 98 aa9.68□□□□□ -0.86
SPAST-201ENST00000315285 FASNP49327 2511 aaKnown RBP9.67□□□□□ -0.86
SPAST-201ENST00000315285 M0R2N4 97 aa9.67□□□□□ -0.86
SPAST-201ENST00000315285 Q9UF83 564 aa9.67□□□□□ -0.86
SPAST-201ENST00000315285 C1orf137Q5JT78 98 aa9.67□□□□□ -0.86
SPAST-201ENST00000315285 LYPD5Q6UWN5 251 aa9.67□□□□□ -0.86
SPAST-201ENST00000315285 LINC00846Q9NV44 126 aa9.66□□□□□ -0.86
SPAST-201ENST00000315285 PRO0461Q9UI25 63 aa9.66□□□□□ -0.86
SPAST-201ENST00000315285 PLAC8L1A1L4L8 177 aa9.66□□□□□ -0.86
SPAST-201ENST00000315285 KLK9Q2XQG4 91 aa9.66□□□□□ -0.86
SPAST-201ENST00000315285 LINC00575Q6W349 94 aa9.66□□□□□ -0.86
SPAST-201ENST00000315285 MUC4Q99102 2169 aa9.65□□□□□ -0.86
SPAST-201ENST00000315285 IGLV5-45A0A087WSX0 123 aa9.65□□□□□ -0.86
SPAST-201ENST00000315285 CELA1Q9UNI1 258 aa9.65□□□□□ -0.86
SPAST-201ENST00000315285 A8MTW9 85 aa9.65□□□□□ -0.86
SPAST-201ENST00000315285 PRR4Q16378 134 aa9.65□□□□□ -0.87
SPAST-201ENST00000315285 FAM30AQ9NZY2 134 aa9.65□□□□□ -0.87
SPAST-201ENST00000315285 ZNF706Q9Y5V0 76 aaPredicted RBP9.64□□□□□ -0.87
SPAST-201ENST00000315285 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
SPAST-201ENST00000315285 SPINK6Q6UWN8 80 aa9.63□□□□□ -0.87
SPAST-201ENST00000315285 Q8N3U1 123 aa9.63□□□□□ -0.87
SPAST-201ENST00000315285 LINC00474Q9P2X8 69 aa9.63□□□□□ -0.87
SPAST-201ENST00000315285 FHL3Q13643 280 aa9.62□□□□□ -0.87
SPAST-201ENST00000315285 HRCT1Q6UXD1 115 aa9.62□□□□□ -0.87
SPAST-201ENST00000315285 SPTSSBQ8NFR3 76 aa9.62□□□□□ -0.87
SPAST-201ENST00000315285 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
SPAST-201ENST00000315285 REG3GQ6UW15 175 aa9.62□□□□□ -0.87
SPAST-201ENST00000315285 IGLV9-49A0A0B4J1Y8 123 aa9.62□□□□□ -0.87
SPAST-201ENST00000315285 TRBV7-7A0A0K0K1E9 115 aa9.61□□□□□ -0.87
SPAST-201ENST00000315285 F8WDY8 70 aa9.61□□□□□ -0.87
SPAST-201ENST00000315285 Q6ZRU5 148 aa9.61□□□□□ -0.87
SPAST-201ENST00000315285 SOSTDC1Q6X4U4 206 aa9.6□□□□□ -0.87
SPAST-201ENST00000315285 Q6ZVQ6 151 aa9.6□□□□□ -0.87
SPAST-201ENST00000315285 CHD7Q9P2D1 2997 aa9.6□□□□□ -0.87
SPAST-201ENST00000315285 EPG5Q9HCE0 2579 aa9.6□□□□□ -0.87
SPAST-201ENST00000315285 CASC2Q6XLA1 102 aa9.59□□□□□ -0.87
SPAST-201ENST00000315285 C10orf25Q5T742 122 aa9.59□□□□□ -0.87
SPAST-201ENST00000315285 V9GYY9 64 aa9.59□□□□□ -0.87
SPAST-201ENST00000315285 SEC61GP60059 68 aa9.59□□□□□ -0.87
SPAST-201ENST00000315285 A0A0U1RQV1 116 aa9.58□□□□□ -0.88
SPAST-201ENST00000315285 SMIM26A0A096LP01 95 aa9.57□□□□□ -0.88
SPAST-201ENST00000315285 MRPL55Q7Z7F7 128 aaKnown RBP9.57□□□□□ -0.88
SPAST-201ENST00000315285 FAM218AQ96MZ4 157 aa9.56□□□□□ -0.88
SPAST-201ENST00000315285 PRYO14603 147 aa9.56□□□□□ -0.88
SPAST-201ENST00000315285 SBSPONQ8IVN8 264 aa9.56□□□□□ -0.88
SPAST-201ENST00000315285 LINC01547P58512 204 aaPredicted RBP9.56□□□□□ -0.88
SPAST-201ENST00000315285 SERP1Q9Y6X1 66 aa9.56□□□□□ -0.88
SPAST-201ENST00000315285 Q8N9L7 120 aa9.54□□□□□ -0.88
SPAST-201ENST00000315285 LINC00208Q96KT6 92 aa9.53□□□□□ -0.88
SPAST-201ENST00000315285 C5orf42Q9H799 3197 aa9.53□□□□□ -0.88
SPAST-201ENST00000315285 SVIPQ8NHG7 77 aa9.53□□□□□ -0.88
SPAST-201ENST00000315285 X6R8D5 127 aa9.53□□□□□ -0.88
SPAST-201ENST00000315285 LY6G6CO95867 125 aa9.52□□□□□ -0.89
SPAST-201ENST00000315285 NUPR2A6NF83 97 aa9.52□□□□□ -0.89
SPAST-201ENST00000315285 A0A087WSZ3 146 aa9.52□□□□□ -0.89
SPAST-201ENST00000315285 FSHBP01225 129 aa9.51□□□□□ -0.89
SPAST-201ENST00000315285 Q9BRP9 147 aa9.51□□□□□ -0.89
SPAST-201ENST00000315285 LITAFQ99732 161 aa9.51□□□□□ -0.89
SPAST-201ENST00000315285 C6orf48Q9UBA6 75 aa9.5□□□□□ -0.89
SPAST-201ENST00000315285 CXCL6P80162 114 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms