RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 C19orf73Q9NVV2 129 aa4.31□□□□□ -1.72
PRKDC-201ENST00000314191 A0A1B0GUV1 79 aa4.31□□□□□ -1.72
PRKDC-201ENST00000314191 UQCRQO14949 82 aa4.3□□□□□ -1.72
PRKDC-201ENST00000314191 KLK5Q9Y337 293 aaPredicted RBP4.3□□□□□ -1.72
PRKDC-201ENST00000314191 SOSTDC1Q6X4U4 206 aa4.3□□□□□ -1.72
PRKDC-201ENST00000314191 ABCA12Q86UK0 2595 aa4.3□□□□□ -1.72
PRKDC-201ENST00000314191 GIG44P09565 113 aaPredicted RBP4.3□□□□□ -1.72
PRKDC-201ENST00000314191 IGLV5-45A0A087WSX0 123 aa4.3□□□□□ -1.72
PRKDC-201ENST00000314191 LINC00337Q8N6G1 96 aa4.29□□□□□ -1.72
PRKDC-201ENST00000314191 A0A087WYN8 130 aa4.29□□□□□ -1.72
PRKDC-201ENST00000314191 NDUFC2-KCTD14E9PQ53 114 aa4.29□□□□□ -1.72
PRKDC-201ENST00000314191 RPL28P46779 137 aaKnown RBP4.29□□□□□ -1.72
PRKDC-201ENST00000314191 TRAV23DV6A0A075B6W5 121 aa4.29□□□□□ -1.72
PRKDC-201ENST00000314191 USP9XQ93008 2570 aaPredicted RBP4.29□□□□□ -1.72
PRKDC-201ENST00000314191 A0A1B0GX51 115 aa4.29□□□□□ -1.72
PRKDC-201ENST00000314191 M0R378 163 aa4.29□□□□□ -1.72
PRKDC-201ENST00000314191 USP24Q9UPU5 2620 aa4.29□□□□□ -1.72
PRKDC-201ENST00000314191 SDIM1Q6ZPB5 146 aa4.29□□□□□ -1.72
PRKDC-201ENST00000314191 TRBV10-3A0A0K0K1G6 114 aa4.29□□□□□ -1.72
PRKDC-201ENST00000314191 MP68P56378 58 aa4.29□□□□□ -1.72
PRKDC-201ENST00000314191 NREPQ16612 68 aa4.29□□□□□ -1.72
PRKDC-201ENST00000314191 A0A096LNI7 61 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 PLAC8L1A1L4L8 177 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 CSNK1G2-AS1Q8NCQ2 148 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 FUSP35637 526 aaKnown RBP eCLIP4.28□□□□□ -1.72
PRKDC-201ENST00000314191 EIF4EBP3O60516 100 aaPredicted RBP4.28□□□□□ -1.72
PRKDC-201ENST00000314191 EGFEM1PQ0D2K5 195 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 LITAFQ99732 161 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 SCXQ7RTU7 201 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 COX17Q14061 63 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 ATP5EP2Q5VTU8 51 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 Q6ZRU5 148 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 WFDC9Q8NEX5 89 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 EPG5Q9HCE0 2579 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 M0R2N4 97 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 ESRGQ1W209 222 aa4.28□□□□□ -1.72
PRKDC-201ENST00000314191 SBSPONQ8IVN8 264 aa4.28□□□□□ -1.73
PRKDC-201ENST00000314191 RPL37AP8A6NKH3 93 aa4.27□□□□□ -1.73
PRKDC-201ENST00000314191 C1orf195Q5TG92 126 aa4.27□□□□□ -1.73
PRKDC-201ENST00000314191 FAM19A1Q7Z5A9 133 aa4.27□□□□□ -1.73
PRKDC-201ENST00000314191 SPATA3Q8NHX4 192 aa4.27□□□□□ -1.73
PRKDC-201ENST00000314191 Q8NAQ8 132 aa4.27□□□□□ -1.73
PRKDC-201ENST00000314191 UBE2AP49459 152 aa4.27□□□□□ -1.73
PRKDC-201ENST00000314191 IMUPQ9GZP8 106 aa4.27□□□□□ -1.73
PRKDC-201ENST00000314191 ZNF73O43830 326 aaPredicted RBP4.27□□□□□ -1.73
PRKDC-201ENST00000314191 IL17DQ8TAD2 202 aa4.26□□□□□ -1.73
PRKDC-201ENST00000314191 PRO0461Q9UI25 63 aa4.26□□□□□ -1.73
PRKDC-201ENST00000314191 C10orf25Q5T742 122 aa4.26□□□□□ -1.73
PRKDC-201ENST00000314191 CHKB-CPT1BH3BT56 60 aa4.26□□□□□ -1.73
PRKDC-201ENST00000314191 C3orf22Q8N5N4 141 aa4.26□□□□□ -1.73
PRKDC-201ENST00000314191 FASNP49327 2511 aaKnown RBP4.26□□□□□ -1.73
PRKDC-201ENST00000314191 USP9YO00507 2555 aaPredicted RBP4.26□□□□□ -1.73
PRKDC-201ENST00000314191 VCANP13611 3396 aa4.26□□□□□ -1.73
PRKDC-201ENST00000314191 PIEZO2Q9H5I5 2752 aa4.25□□□□□ -1.73
PRKDC-201ENST00000314191 PDE6GP18545 87 aa4.25□□□□□ -1.73
PRKDC-201ENST00000314191 PPDPFQ9H3Y8 114 aa4.25□□□□□ -1.73
PRKDC-201ENST00000314191 ENHOQ6UWT2 76 aa4.24□□□□□ -1.73
PRKDC-201ENST00000314191 RAI1Q7Z5J4 1906 aaPredicted RBP4.24□□□□□ -1.73
PRKDC-201ENST00000314191 ANKRD11Q6UB99 2663 aaPredicted RBP4.24□□□□□ -1.73
PRKDC-201ENST00000314191 FAM236DA0A1B0GTK5 79 aa4.24□□□□□ -1.73
PRKDC-201ENST00000314191 FAM236CP0DP71 79 aa4.24□□□□□ -1.73
PRKDC-201ENST00000314191 CCKP06307 115 aa4.24□□□□□ -1.73
PRKDC-201ENST00000314191 MUC7Q8TAX7 377 aa4.24□□□□□ -1.73
PRKDC-201ENST00000314191 USP17L23D6RBM5 183 aa4.24□□□□□ -1.73
PRKDC-201ENST00000314191 Q8N814 137 aa4.23□□□□□ -1.73
PRKDC-201ENST00000314191 FAM218AQ96MZ4 157 aa4.23□□□□□ -1.73
PRKDC-201ENST00000314191 CEP295Q9C0D2 2601 aa4.23□□□□□ -1.73
PRKDC-201ENST00000314191 AKAP13Q12802 2813 aa4.23□□□□□ -1.73
PRKDC-201ENST00000314191 SPTSSBQ8NFR3 76 aa4.23□□□□□ -1.73
PRKDC-201ENST00000314191 LOC107984640A0A0U1RRK4 108 aa4.23□□□□□ -1.73
PRKDC-201ENST00000314191 CDIP1Q9H305 208 aa4.23□□□□□ -1.73
PRKDC-201ENST00000314191 C3orf84H3BNL1 204 aa4.23□□□□□ -1.73
PRKDC-201ENST00000314191 A0A087WVE0 104 aa4.23□□□□□ -1.73
PRKDC-201ENST00000314191 COL27A1Q8IZC6 1860 aaPredicted RBP4.22□□□□□ -1.73
PRKDC-201ENST00000314191 ANKRD17O75179 2603 aaKnown RBP4.22□□□□□ -1.73
PRKDC-201ENST00000314191 LINC01561Q8N1V8 128 aa4.22□□□□□ -1.73
PRKDC-201ENST00000314191 JMJD1CQ15652 2540 aa4.22□□□□□ -1.73
PRKDC-201ENST00000314191 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.22□□□□□ -1.73
PRKDC-201ENST00000314191 C14orf177Q52M58 125 aa4.22□□□□□ -1.73
PRKDC-201ENST00000314191 LINC00575Q6W349 94 aa4.22□□□□□ -1.73
PRKDC-201ENST00000314191 KRTAP10-11P60412 298 aa4.22□□□□□ -1.73
PRKDC-201ENST00000314191 UPK3BQ9BT76 320 aa4.22□□□□□ -1.73
PRKDC-201ENST00000314191 A0A0U1RQV1 116 aa4.22□□□□□ -1.73
PRKDC-201ENST00000314191 PRR15LQ9BU68 103 aa4.22□□□□□ -1.73
PRKDC-201ENST00000314191 CR1P17927 2039 aa4.22□□□□□ -1.73
PRKDC-201ENST00000314191 M0QXV9 152 aa4.21□□□□□ -1.74
PRKDC-201ENST00000314191 BPY2O14599 106 aa4.21□□□□□ -1.74
PRKDC-201ENST00000314191 C20orf197Q8N268 126 aa4.21□□□□□ -1.74
PRKDC-201ENST00000314191 LINC00612Q8N6U2 182 aa4.21□□□□□ -1.74
PRKDC-201ENST00000314191 C6orf48Q9UBA6 75 aa4.21□□□□□ -1.74
PRKDC-201ENST00000314191 H3BNG1 76 aa4.21□□□□□ -1.74
PRKDC-201ENST00000314191 NDUFB1O75438 58 aa4.21□□□□□ -1.74
PRKDC-201ENST00000314191 C2orf48Q96LS8 159 aa4.21□□□□□ -1.74
PRKDC-201ENST00000314191 LINC01556Q5JQF7 62 aa4.21□□□□□ -1.74
PRKDC-201ENST00000314191 FAM104AQ969W3 186 aa4.2□□□□□ -1.74
PRKDC-201ENST00000314191 FAM19A3Q7Z5A8 133 aa4.2□□□□□ -1.74
PRKDC-201ENST00000314191 B9D2Q9BPU9 175 aa4.2□□□□□ -1.74
PRKDC-201ENST00000314191 KIAA0087Q14695 138 aa4.19□□□□□ -1.74
PRKDC-201ENST00000314191 C4orf48Q5BLP8 95 aa4.19□□□□□ -1.74
PRKDC-201ENST00000314191 DHRS4-AS1Q9P1J3 65 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms