RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 RAB5BP61020 215 aa11.42□□□□□ -0.58
RPA2-201ENST00000313433 Q6ZRP5 223 aa11.42□□□□□ -0.58
RPA2-201ENST00000313433 FAM19A2Q8N3H0 131 aa11.42□□□□□ -0.58
RPA2-201ENST00000313433 LINC00469Q8N7U9 141 aa11.42□□□□□ -0.58
RPA2-201ENST00000313433 CHCHD1Q96BP2 118 aaKnown RBP11.42□□□□□ -0.58
RPA2-201ENST00000313433 GEMIN7Q9H840 131 aaKnown RBP11.42□□□□□ -0.58
RPA2-201ENST00000313433 LINC00474Q9P2X8 69 aa11.42□□□□□ -0.58
RPA2-201ENST00000313433 OXTP01178 125 aa11.41□□□□□ -0.58
RPA2-201ENST00000313433 IGLC3P0DOY3 106 aa11.41□□□□□ -0.58
RPA2-201ENST00000313433 PRR3P79522 188 aaKnown RBP11.41□□□□□ -0.58
RPA2-201ENST00000313433 F8WDY8 70 aa11.4□□□□□ -0.58
RPA2-201ENST00000313433 SPINK8P0C7L1 97 aa11.4□□□□□ -0.58
RPA2-201ENST00000313433 SEC11AP67812 179 aa11.4□□□□□ -0.58
RPA2-201ENST00000313433 RPL18AQ02543 176 aaKnown RBP11.4□□□□□ -0.58
RPA2-201ENST00000313433 KRTAP7-1Q8IUC3 87 aa11.4□□□□□ -0.58
RPA2-201ENST00000313433 Q8IZM0 81 aa11.4□□□□□ -0.58
RPA2-201ENST00000313433 TOMM7Q9P0U1 55 aa11.4□□□□□ -0.58
RPA2-201ENST00000313433 SERF1AO75920 110 aa11.39□□□□□ -0.59
RPA2-201ENST00000313433 TLX1NBP0CAT3 122 aa11.39□□□□□ -0.59
RPA2-201ENST00000313433 C7orf33Q8WU49 177 aa11.39□□□□□ -0.59
RPA2-201ENST00000313433 PKIGQ9Y2B9 76 aa11.39□□□□□ -0.59
RPA2-201ENST00000313433 FAM168BA1KXE4 195 aa11.38□□□□□ -0.59
RPA2-201ENST00000313433 MT1HL1P0DM35 61 aa11.38□□□□□ -0.59
RPA2-201ENST00000313433 ZNF22P17026 224 aaPredicted RBP11.38□□□□□ -0.59
RPA2-201ENST00000313433 NDUFA6P56556 154 aa11.38□□□□□ -0.59
RPA2-201ENST00000313433 BAGE3Q86Y29 109 aa11.38□□□□□ -0.59
RPA2-201ENST00000313433 C11orf86A6NJI1 115 aa11.37□□□□□ -0.59
RPA2-201ENST00000313433 TRBV30A0A0K0K1B3 111 aa11.36□□□□□ -0.59
RPA2-201ENST00000313433 ATP5LO75964 103 aa11.36□□□□□ -0.59
RPA2-201ENST00000313433 IGLV5-39A0A0G2JS06 123 aa11.35□□□□□ -0.59
RPA2-201ENST00000313433 C6orf226Q5I0X4 101 aa11.35□□□□□ -0.59
RPA2-201ENST00000313433 PACRGQ96M98 296 aaPredicted RBP11.35□□□□□ -0.59
RPA2-201ENST00000313433 TNXBP22105 4242 aa11.34□□□□□ -0.59
RPA2-201ENST00000313433 GAGE2EQ4V326 116 aa11.34□□□□□ -0.59
RPA2-201ENST00000313433 C9orf129Q5T035 196 aaKnown RBP11.34□□□□□ -0.59
RPA2-201ENST00000313433 KRTAP11-1Q8IUC1 163 aa11.34□□□□□ -0.59
RPA2-201ENST00000313433 COX7B2Q8TF08 81 aa11.34□□□□□ -0.59
RPA2-201ENST00000313433 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
RPA2-201ENST00000313433 GAGE2DQ9UEU5 116 aa11.34□□□□□ -0.59
RPA2-201ENST00000313433 HSBP1O75506 76 aa11.33□□□□□ -0.6
RPA2-201ENST00000313433 PRSS2P07478 247 aa11.33□□□□□ -0.6
RPA2-201ENST00000313433 NDUFC2-KCTD14E9PQ53 114 aa11.32□□□□□ -0.6
RPA2-201ENST00000313433 PHF5AQ7RTV0 110 aaKnown RBP11.32□□□□□ -0.6
RPA2-201ENST00000313433 F8VRH5 84 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 HIST1H2BKO60814 126 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 HIST1H2BJP06899 126 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 HIST1H2BOP23527 126 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 HIST1H2BBP33778 126 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 HIST1H2BDP58876 126 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 CKS1BP61024 79 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 HIST1H2BCP62807 126 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 HIST2H2BEQ16778 126 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.31□□□□□ -0.6
RPA2-201ENST00000313433 HIST1H2BHQ93079 126 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 HIST1H2BNQ99877 126 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 HIST1H2BMQ99879 126 aa11.31□□□□□ -0.6
RPA2-201ENST00000313433 CHTOPQ9Y3Y2 248 aaKnown RBP11.31□□□□□ -0.6
RPA2-201ENST00000313433 TRAV12-1A0A0B4J245 112 aa11.3□□□□□ -0.6
RPA2-201ENST00000313433 SRSF9Q13242 221 aaKnown RBP eCLIP11.29□□□□□ -0.6
RPA2-201ENST00000313433 HMCN2Q8NDA2 5059 aa11.29□□□□□ -0.6
RPA2-201ENST00000313433 ODF1Q14990 250 aa11.28□□□□□ -0.6
RPA2-201ENST00000313433 H3BRM9 83 aa11.27□□□□□ -0.61
RPA2-201ENST00000313433 SERTAD4-AS1Q5TG53 156 aa11.27□□□□□ -0.61
RPA2-201ENST00000313433 FAM19A5Q7Z5A7 132 aaPredicted RBP11.27□□□□□ -0.61
RPA2-201ENST00000313433 XAGE1AQ9HD64 81 aa11.27□□□□□ -0.61
RPA2-201ENST00000313433 PSORS1C2Q9UIG4 136 aa11.27□□□□□ -0.61
RPA2-201ENST00000313433 CXCL5P42830 114 aa11.26□□□□□ -0.61
RPA2-201ENST00000313433 TMEM170BQ5T4T1 132 aa11.26□□□□□ -0.61
RPA2-201ENST00000313433 TMEM223A0PJW6 202 aa11.25□□□□□ -0.61
RPA2-201ENST00000313433 LEPROTL1O95214 131 aa11.25□□□□□ -0.61
RPA2-201ENST00000313433 FABP4P15090 132 aa11.25□□□□□ -0.61
RPA2-201ENST00000313433 H0Y8G0 127 aa11.24□□□□□ -0.61
RPA2-201ENST00000313433 ATP6V1G1O75348 118 aa11.22□□□□□ -0.61
RPA2-201ENST00000313433 SPINK6Q6UWN8 80 aa11.22□□□□□ -0.61
RPA2-201ENST00000313433 ZNF625Q96I27 306 aaPredicted RBP11.22□□□□□ -0.61
RPA2-201ENST00000313433 PMCHL2Q9BQD1 86 aa11.22□□□□□ -0.61
RPA2-201ENST00000313433 LINC01600Q96MT4 127 aa11.21□□□□□ -0.61
RPA2-201ENST00000313433 M0QXV9 152 aa11.19□□□□□ -0.62
RPA2-201ENST00000313433 TSPEAR-AS2P59090 65 aa11.18□□□□□ -0.62
RPA2-201ENST00000313433 C1orf137Q5JT78 98 aa11.18□□□□□ -0.62
RPA2-201ENST00000313433 Q8NDZ9 215 aa11.18□□□□□ -0.62
RPA2-201ENST00000313433 HSPB8Q9UJY1 196 aa11.18□□□□□ -0.62
RPA2-201ENST00000313433 PFN2P35080 140 aa11.17□□□□□ -0.62
RPA2-201ENST00000313433 COA6Q5JTJ3 125 aaKnown RBP11.17□□□□□ -0.62
RPA2-201ENST00000313433 C22orf24Q9Y442 160 aa11.17□□□□□ -0.62
RPA2-201ENST00000313433 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
RPA2-201ENST00000313433 KRTAP10-8P60410 259 aa11.15□□□□□ -0.62
RPA2-201ENST00000313433 IGLV7-43P04211 117 aa11.14□□□□□ -0.63
RPA2-201ENST00000313433 S100A1P23297 94 aa11.13□□□□□ -0.63
RPA2-201ENST00000313433 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
RPA2-201ENST00000313433 DPM2O94777 84 aa11.12□□□□□ -0.63
RPA2-201ENST00000313433 REG3GQ6UW15 175 aa11.12□□□□□ -0.63
RPA2-201ENST00000313433 PLA2G2DQ9UNK4 145 aa11.12□□□□□ -0.63
RPA2-201ENST00000313433 SYS1-DBNDD2H3BUS1 97 aa11.11□□□□□ -0.63
RPA2-201ENST00000313433 MAP1LC3CQ9BXW4 147 aa11.11□□□□□ -0.63
RPA2-201ENST00000313433 IGLV5-37A0A075B6J1 123 aa11.1□□□□□ -0.63
RPA2-201ENST00000313433 A0A0U1RRA0 63 aa11.1□□□□□ -0.63
RPA2-201ENST00000313433 IGKCP01834 107 aa11.1□□□□□ -0.63
RPA2-201ENST00000313433 PLNP26678 52 aa11.1□□□□□ -0.63
RPA2-201ENST00000313433 UBE2BP63146 152 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 347.9 ms