RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 MAP6D1Q9H9H5 199 aa11.17□□□□□ -0.62
LEMD3-201ENST00000308330 DIRC1Q969H9 104 aa11.17□□□□□ -0.62
LEMD3-201ENST00000308330 HCG22E2RYF7 251 aa11.17□□□□□ -0.62
LEMD3-201ENST00000308330 ZNF702PQ9H963 129 aa11.16□□□□□ -0.62
LEMD3-201ENST00000308330 IGIPA6NJ69 53 aa11.16□□□□□ -0.62
LEMD3-201ENST00000308330 LCA10Q71F78 164 aa11.15□□□□□ -0.63
LEMD3-201ENST00000308330 Q6ZVQ6 151 aa11.14□□□□□ -0.63
LEMD3-201ENST00000308330 NTM-AS1Q6ZSK4 140 aa11.14□□□□□ -0.63
LEMD3-201ENST00000308330 RBM12B-AS1Q9P1G2 102 aa11.14□□□□□ -0.63
LEMD3-201ENST00000308330 Q9UF83 564 aa11.14□□□□□ -0.63
LEMD3-201ENST00000308330 F8W735 103 aaPredicted RBP11.13□□□□□ -0.63
LEMD3-201ENST00000308330 C5orf42Q9H799 3197 aa11.12□□□□□ -0.63
LEMD3-201ENST00000308330 IGLV2-18A0A075B6J9 118 aa11.12□□□□□ -0.63
LEMD3-201ENST00000308330 A0A087WYN8 130 aa11.12□□□□□ -0.63
LEMD3-201ENST00000308330 LINC01547P58512 204 aaPredicted RBP11.12□□□□□ -0.63
LEMD3-201ENST00000308330 K7EQG2 157 aa11.11□□□□□ -0.63
LEMD3-201ENST00000308330 TRBV6-5A0A0K0K1A5 114 aa11.11□□□□□ -0.63
LEMD3-201ENST00000308330 H7BZZ5 65 aa11.1□□□□□ -0.63
LEMD3-201ENST00000308330 C11orf45Q8TAV5 145 aa11.09□□□□□ -0.63
LEMD3-201ENST00000308330 CHD9Q3L8U1 2897 aa11.09□□□□□ -0.63
LEMD3-201ENST00000308330 POLR2KP53803 58 aaKnown RBP11.09□□□□□ -0.63
LEMD3-201ENST00000308330 C7orf65Q6ZTY9 151 aa11.09□□□□□ -0.63
LEMD3-201ENST00000308330 CFAP46Q8IYW2 2715 aa11.09□□□□□ -0.63
LEMD3-201ENST00000308330 C1orf158Q8N1D5 194 aa11.09□□□□□ -0.63
LEMD3-201ENST00000308330 IGLV10-54A0A075B6I4 117 aa11.08□□□□□ -0.64
LEMD3-201ENST00000308330 C18orf65Q6ZTR6 163 aa11.08□□□□□ -0.64
LEMD3-201ENST00000308330 C6orf99Q4VX62 202 aa11.08□□□□□ -0.64
LEMD3-201ENST00000308330 K7EQD1 137 aa11.08□□□□□ -0.64
LEMD3-201ENST00000308330 KLKP1Q107X0 134 aa11.08□□□□□ -0.64
LEMD3-201ENST00000308330 BRCA2P51587 3418 aa11.07□□□□□ -0.64
LEMD3-201ENST00000308330 IBA57-AS1B1ANH7 110 aa11.07□□□□□ -0.64
LEMD3-201ENST00000308330 A8MUN3 132 aa11.07□□□□□ -0.64
LEMD3-201ENST00000308330 COX7BP24311 80 aa11.07□□□□□ -0.64
LEMD3-201ENST00000308330 HIGD2AQ9BW72 106 aa11.07□□□□□ -0.64
LEMD3-201ENST00000308330 PRO0255Q9UI72 69 aa11.06□□□□□ -0.64
LEMD3-201ENST00000308330 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
LEMD3-201ENST00000308330 C3orf84H3BNL1 204 aa11.05□□□□□ -0.64
LEMD3-201ENST00000308330 ATP11AUNQ6ZP68 121 aa11.05□□□□□ -0.64
LEMD3-201ENST00000308330 Q6ZQY7 126 aa11.04□□□□□ -0.64
LEMD3-201ENST00000308330 PRM2P04554 102 aa11.04□□□□□ -0.64
LEMD3-201ENST00000308330 ZNF706Q9Y5V0 76 aaPredicted RBP11.04□□□□□ -0.64
LEMD3-201ENST00000308330 LINC00208Q96KT6 92 aa11.03□□□□□ -0.64
LEMD3-201ENST00000308330 SETXQ7Z333 2677 aaKnown RBP11.03□□□□□ -0.64
LEMD3-201ENST00000308330 Q6ZTI0 123 aa11.03□□□□□ -0.64
LEMD3-201ENST00000308330 B9D2Q9BPU9 175 aa11.03□□□□□ -0.64
LEMD3-201ENST00000308330 M0QY20 66 aa11.02□□□□□ -0.64
LEMD3-201ENST00000308330 ZNF580Q9UK33 172 aa11.02□□□□□ -0.64
LEMD3-201ENST00000308330 IGLV1-40P01703 118 aa11.02□□□□□ -0.65
LEMD3-201ENST00000308330 PRUNE2Q8WUY3 3088 aa11.02□□□□□ -0.65
LEMD3-201ENST00000308330 C11orf21Q9P2W6 132 aa11.02□□□□□ -0.65
LEMD3-201ENST00000308330 LINC00467Q9BRT7 94 aa11.01□□□□□ -0.65
LEMD3-201ENST00000308330 TRAV10A0A0B4J240 114 aa11.01□□□□□ -0.65
LEMD3-201ENST00000308330 TSHBP01222 138 aa11.01□□□□□ -0.65
LEMD3-201ENST00000308330 WFDC10BQ8IUB3 73 aa11.01□□□□□ -0.65
LEMD3-201ENST00000308330 KLK12Q9UKR0 248 aa11.01□□□□□ -0.65
LEMD3-201ENST00000308330 Q8N814 137 aa11.01□□□□□ -0.65
LEMD3-201ENST00000308330 C8orf87E5RJ46 101 aa11□□□□□ -0.65
LEMD3-201ENST00000308330 TM2D3Q9BRN9 247 aa11□□□□□ -0.65
LEMD3-201ENST00000308330 DEFB131BA0A096LNP1 70 aa11□□□□□ -0.65
LEMD3-201ENST00000308330 RETNLBQ9BQ08 111 aa10.99□□□□□ -0.65
LEMD3-201ENST00000308330 ETDCA0A1B0GVM5 59 aa10.99□□□□□ -0.65
LEMD3-201ENST00000308330 ZNF292O60281 2723 aa10.98□□□□□ -0.65
LEMD3-201ENST00000308330 ATG2AQ2TAZ0 1938 aa10.98□□□□□ -0.65
LEMD3-201ENST00000308330 WFDC13Q8IUB5 93 aa10.98□□□□□ -0.65
LEMD3-201ENST00000308330 COL4A2P08572 1712 aa10.97□□□□□ -0.65
LEMD3-201ENST00000308330 TRBV6-8A0A0A6YYG3 113 aa10.97□□□□□ -0.65
LEMD3-201ENST00000308330 CAMK2N2Q96S95 79 aa10.97□□□□□ -0.65
LEMD3-201ENST00000308330 CYP4F30PQ9H0H9 118 aa10.97□□□□□ -0.65
LEMD3-201ENST00000308330 Q8N9L7 120 aa10.96□□□□□ -0.65
LEMD3-201ENST00000308330 RAI1Q7Z5J4 1906 aaPredicted RBP10.96□□□□□ -0.65
LEMD3-201ENST00000308330 A0A0J9YWU9 116 aa10.96□□□□□ -0.66
LEMD3-201ENST00000308330 IGKV4-1P06312 121 aa10.96□□□□□ -0.66
LEMD3-201ENST00000308330 SPAG11AQ6PDA7 123 aa10.96□□□□□ -0.66
LEMD3-201ENST00000308330 TRAV22A0A0B4J277 110 aa10.95□□□□□ -0.66
LEMD3-201ENST00000308330 TEP1Q99973 2627 aaKnown RBP10.94□□□□□ -0.66
LEMD3-201ENST00000308330 hDV103S1A0JD37 113 aa10.93□□□□□ -0.66
LEMD3-201ENST00000308330 K7ERS5 55 aa10.92□□□□□ -0.66
LEMD3-201ENST00000308330 PTPRBP23467 1997 aa10.92□□□□□ -0.66
LEMD3-201ENST00000308330 ITPR3Q14573 2671 aa10.92□□□□□ -0.66
LEMD3-201ENST00000308330 Q8N2B8 174 aa10.92□□□□□ -0.66
LEMD3-201ENST00000308330 ZFAND2AQ8N6M9 145 aa10.92□□□□□ -0.66
LEMD3-201ENST00000308330 FAM218AQ96MZ4 157 aa10.91□□□□□ -0.66
LEMD3-201ENST00000308330 ERC2-IT1O76042 136 aa10.91□□□□□ -0.66
LEMD3-201ENST00000308330 FLNAP21333 2647 aaKnown RBP10.91□□□□□ -0.66
LEMD3-201ENST00000308330 COX8CQ7Z4L0 72 aa10.91□□□□□ -0.66
LEMD3-201ENST00000308330 RNASE3P12724 160 aaKnown RBP10.9□□□□□ -0.66
LEMD3-201ENST00000308330 C9orf116Q5BN46 136 aaPredicted RBP10.9□□□□□ -0.66
LEMD3-201ENST00000308330 TRBV6-4A0A1B0GX49 114 aa10.9□□□□□ -0.66
LEMD3-201ENST00000308330 H0Y9J4 135 aa10.9□□□□□ -0.66
LEMD3-201ENST00000308330 IGHV4-30-4P0DP06 118 aa10.9□□□□□ -0.66
LEMD3-201ENST00000308330 FP248Q71RG6 208 aaPredicted RBP10.89□□□□□ -0.67
LEMD3-201ENST00000308330 ADAMTS20P59510 1910 aa10.89□□□□□ -0.67
LEMD3-201ENST00000308330 OXTP01178 125 aa10.89□□□□□ -0.67
LEMD3-201ENST00000308330 BPTFQ12830 3046 aa10.89□□□□□ -0.67
LEMD3-201ENST00000308330 M0R378 163 aa10.89□□□□□ -0.67
LEMD3-201ENST00000308330 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.88□□□□□ -0.67
LEMD3-201ENST00000308330 Q6ZRU5 148 aa10.87□□□□□ -0.67
LEMD3-201ENST00000308330 TRANK1O15050 2925 aa10.86□□□□□ -0.67
LEMD3-201ENST00000308330 ODF3L2Q3SX64 289 aa10.85□□□□□ -0.67
LEMD3-201ENST00000308330 AMELXQ99217 191 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms