RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 UNQ6190/PRO20217Q6UXQ8 127 aa6.48□□□□□ -1.37
PTPRE-202ENST00000306042 MAP1AP78559 2803 aaPredicted RBP6.47□□□□□ -1.37
PTPRE-202ENST00000306042 TRBV30A0A0K0K1B3 111 aa6.47□□□□□ -1.37
PTPRE-202ENST00000306042 BAALC-AS2P0C853 105 aa6.47□□□□□ -1.37
PTPRE-202ENST00000306042 A0A096LNI7 61 aa6.47□□□□□ -1.37
PTPRE-202ENST00000306042 IGIPA6NJ69 53 aa6.47□□□□□ -1.37
PTPRE-202ENST00000306042 UBL5Q9BZL1 73 aa6.47□□□□□ -1.37
PTPRE-202ENST00000306042 NBDYA0A0U1RRE5 68 aa6.46□□□□□ -1.37
PTPRE-202ENST00000306042 EYSQ5T1H1 3165 aa6.46□□□□□ -1.38
PTPRE-202ENST00000306042 M0R378 163 aa6.46□□□□□ -1.38
PTPRE-202ENST00000306042 HAMPP81172 84 aa6.46□□□□□ -1.38
PTPRE-202ENST00000306042 COX6A2Q02221 97 aa6.46□□□□□ -1.38
PTPRE-202ENST00000306042 COX17Q14061 63 aa6.46□□□□□ -1.38
PTPRE-202ENST00000306042 DLEU1O43261 78 aa6.45□□□□□ -1.38
PTPRE-202ENST00000306042 LINC00308Q8TCZ7 52 aa6.45□□□□□ -1.38
PTPRE-202ENST00000306042 KIF25-AS1Q9Y6Z4 181 aa6.45□□□□□ -1.38
PTPRE-202ENST00000306042 hADV29S1A0JD25 119 aa6.45□□□□□ -1.38
PTPRE-202ENST00000306042 RPL37AP8A6NKH3 93 aa6.45□□□□□ -1.38
PTPRE-202ENST00000306042 M0QXV9 152 aa6.45□□□□□ -1.38
PTPRE-202ENST00000306042 TM2D3Q9BRN9 247 aa6.45□□□□□ -1.38
PTPRE-202ENST00000306042 PLAC8L1A1L4L8 177 aa6.45□□□□□ -1.38
PTPRE-202ENST00000306042 MTURNQ8N3F0 131 aa6.45□□□□□ -1.38
PTPRE-202ENST00000306042 LINC00588Q9Y4M8 146 aa6.44□□□□□ -1.38
PTPRE-202ENST00000306042 LINC00315P59091 139 aa6.44□□□□□ -1.38
PTPRE-202ENST00000306042 TRACP01848 142 aa6.44□□□□□ -1.38
PTPRE-202ENST00000306042 FXYD2P54710 66 aa6.44□□□□□ -1.38
PTPRE-202ENST00000306042 CSNK1G2-AS1Q8NCQ2 148 aa6.44□□□□□ -1.38
PTPRE-202ENST00000306042 A0A1W2PPM0 123 aa6.43□□□□□ -1.38
PTPRE-202ENST00000306042 PCP4P48539 62 aa6.43□□□□□ -1.38
PTPRE-202ENST00000306042 FOXI1Q12951 378 aa6.43□□□□□ -1.38
PTPRE-202ENST00000306042 C2orf48Q96LS8 159 aa6.43□□□□□ -1.38
PTPRE-202ENST00000306042 TRAV23DV6A0A075B6W5 121 aa6.43□□□□□ -1.38
PTPRE-202ENST00000306042 ANKRD29Q8N6D5 301 aa6.43□□□□□ -1.38
PTPRE-202ENST00000306042 SS18L2Q9UHA2 77 aa6.43□□□□□ -1.38
PTPRE-202ENST00000306042 SMIM1B2RUZ4 78 aa6.42□□□□□ -1.38
PTPRE-202ENST00000306042 H3BMG7 143 aa6.42□□□□□ -1.38
PTPRE-202ENST00000306042 DMXL2Q8TDJ6 3036 aa6.42□□□□□ -1.38
PTPRE-202ENST00000306042 C9orf116Q5BN46 136 aaPredicted RBP6.42□□□□□ -1.38
PTPRE-202ENST00000306042 YPEL4Q96NS1 127 aa6.42□□□□□ -1.38
PTPRE-202ENST00000306042 C6orf99Q4VX62 202 aa6.41□□□□□ -1.38
PTPRE-202ENST00000306042 FRYQ5TBA9 3013 aa6.41□□□□□ -1.38
PTPRE-202ENST00000306042 NDUFS5O43920 106 aa6.41□□□□□ -1.38
PTPRE-202ENST00000306042 TIMM17BO60830 172 aa6.41□□□□□ -1.38
PTPRE-202ENST00000306042 OCIAD2Q56VL3 154 aa6.41□□□□□ -1.38
PTPRE-202ENST00000306042 CDPF1Q6NVV7 123 aa6.41□□□□□ -1.38
PTPRE-202ENST00000306042 PPDPFQ9H3Y8 114 aa6.41□□□□□ -1.38
PTPRE-202ENST00000306042 SPTBN5Q9NRC6 3674 aaKnown RBP6.41□□□□□ -1.38
PTPRE-202ENST00000306042 TCL1BO95988 128 aa6.41□□□□□ -1.38
PTPRE-202ENST00000306042 AMELXQ99217 191 aa6.41□□□□□ -1.38
PTPRE-202ENST00000306042 NDUFC2-KCTD14E9PQ53 114 aa6.4□□□□□ -1.38
PTPRE-202ENST00000306042 NTM-AS1Q6ZSK4 140 aa6.4□□□□□ -1.38
PTPRE-202ENST00000306042 A8MTW9 85 aa6.4□□□□□ -1.38
PTPRE-202ENST00000306042 TMEM256-PLSCR3K7ERE1 68 aa6.4□□□□□ -1.39
PTPRE-202ENST00000306042 UBE2V1Q13404 147 aa6.39□□□□□ -1.39
PTPRE-202ENST00000306042 CLEC2BQ92478 149 aa6.39□□□□□ -1.39
PTPRE-202ENST00000306042 DHRS4-AS1Q9P1J3 65 aa6.39□□□□□ -1.39
PTPRE-202ENST00000306042 REV3LO60673 3130 aa6.39□□□□□ -1.39
PTPRE-202ENST00000306042 LINC00337Q8N6G1 96 aa6.39□□□□□ -1.39
PTPRE-202ENST00000306042 ETDBQ3ZM63 59 aa6.39□□□□□ -1.39
PTPRE-202ENST00000306042 F8W1H4 67 aa6.38□□□□□ -1.39
PTPRE-202ENST00000306042 JMJD7-PLA2G4BH0Y9G9 81 aa6.38□□□□□ -1.39
PTPRE-202ENST00000306042 K7EP34 96 aa6.38□□□□□ -1.39
PTPRE-202ENST00000306042 C1orf137Q5JT78 98 aa6.38□□□□□ -1.39
PTPRE-202ENST00000306042 Q6ZRU5 148 aa6.38□□□□□ -1.39
PTPRE-202ENST00000306042 MAPKAPK5-AS1Q8N8E1 139 aa6.38□□□□□ -1.39
PTPRE-202ENST00000306042 A0A0B4J2C4 111 aa6.38□□□□□ -1.39
PTPRE-202ENST00000306042 RBM3P98179 157 aaKnown RBP6.38□□□□□ -1.39
PTPRE-202ENST00000306042 PPDPFLQ8WWR9 84 aa6.38□□□□□ -1.39
PTPRE-202ENST00000306042 GIG44P09565 113 aaPredicted RBP6.38□□□□□ -1.39
PTPRE-202ENST00000306042 NREPQ16612 68 aa6.37□□□□□ -1.39
PTPRE-202ENST00000306042 LINC01561Q8N1V8 128 aa6.37□□□□□ -1.39
PTPRE-202ENST00000306042 LINC01620Q4KN68 170 aa6.37□□□□□ -1.39
PTPRE-202ENST00000306042 ZNF73O43830 326 aaPredicted RBP6.37□□□□□ -1.39
PTPRE-202ENST00000306042 Q9UF83 564 aa6.37□□□□□ -1.39
PTPRE-202ENST00000306042 ATMQ13315 3056 aa6.36□□□□□ -1.39
PTPRE-202ENST00000306042 DNAH10OSP0CZ25 163 aa6.36□□□□□ -1.39
PTPRE-202ENST00000306042 RTL8CO15255 209 aa6.35□□□□□ -1.39
PTPRE-202ENST00000306042 URB1-AS1Q96HZ7 61 aa6.35□□□□□ -1.39
PTPRE-202ENST00000306042 SIGMAR1Q99720 223 aa6.35□□□□□ -1.39
PTPRE-202ENST00000306042 COL12A1Q99715 3063 aa6.35□□□□□ -1.39
PTPRE-202ENST00000306042 IGLV9-49A0A0B4J1Y8 123 aa6.35□□□□□ -1.39
PTPRE-202ENST00000306042 MRPL55Q7Z7F7 128 aaKnown RBP6.35□□□□□ -1.39
PTPRE-202ENST00000306042 NOTCH1P46531 2555 aa6.34□□□□□ -1.39
PTPRE-202ENST00000306042 ITPR2Q14571 2701 aa6.34□□□□□ -1.39
PTPRE-202ENST00000306042 PDE6GP18545 87 aa6.34□□□□□ -1.39
PTPRE-202ENST00000306042 Q8N3U1 123 aa6.34□□□□□ -1.39
PTPRE-202ENST00000306042 LIMD2Q9BT23 127 aa6.34□□□□□ -1.39
PTPRE-202ENST00000306042 DMXL1Q9Y485 3027 aa6.34□□□□□ -1.39
PTPRE-202ENST00000306042 H0Y9J4 135 aa6.34□□□□□ -1.39
PTPRE-202ENST00000306042 WIPF1O43516 503 aa6.34□□□□□ -1.39
PTPRE-202ENST00000306042 CELSR3Q9NYQ7 3312 aa6.34□□□□□ -1.4
PTPRE-202ENST00000306042 IGHV3OR16-9A0A0B4J2B5 98 aa6.33□□□□□ -1.4
PTPRE-202ENST00000306042 TRBV10-3A0A0K0K1G6 114 aa6.33□□□□□ -1.4
PTPRE-202ENST00000306042 Q6ZQY7 126 aa6.33□□□□□ -1.4
PTPRE-202ENST00000306042 DNAH14Q0VDD8 3507 aa6.32□□□□□ -1.4
PTPRE-202ENST00000306042 UBR5O95071 2799 aaPredicted RBP6.32□□□□□ -1.4
PTPRE-202ENST00000306042 SLPIP03973 132 aa6.31□□□□□ -1.4
PTPRE-202ENST00000306042 TP73-AS1Q9UF72 201 aa6.31□□□□□ -1.4
PTPRE-202ENST00000306042 ENHOQ6UWT2 76 aa6.31□□□□□ -1.4
PTPRE-202ENST00000306042 TRBV10-2A0A0K0K1G8 114 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms