RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 LINC00310P59036 64 aa6.14□□□□□ -1.43
COL4A3-201ENST00000304990 COA6Q5JTJ3 125 aaKnown RBP6.14□□□□□ -1.43
COL4A3-201ENST00000304990 RNASEKQ6P5S7 137 aaKnown RBP6.14□□□□□ -1.43
COL4A3-201ENST00000304990 OR5A1Q8NGJ0 315 aa6.14□□□□□ -1.43
COL4A3-201ENST00000304990 TMEM101Q96IK0 257 aa6.14□□□□□ -1.43
COL4A3-201ENST00000304990 TIMM17AQ99595 171 aa6.14□□□□□ -1.43
COL4A3-201ENST00000304990 KRTAP4-11Q9BYQ6 195 aa6.14□□□□□ -1.43
COL4A3-201ENST00000304990 MUC2Q02817 5179 aa6.14□□□□□ -1.43
COL4A3-201ENST00000304990 FAT4Q6V0I7 4981 aa6.14□□□□□ -1.43
COL4A3-201ENST00000304990 IGHV1-58A0A0C4DH39 117 aa6.13□□□□□ -1.43
COL4A3-201ENST00000304990 LOC107984640A0A0U1RRK4 108 aa6.13□□□□□ -1.43
COL4A3-201ENST00000304990 PTTG1IPP53801 180 aa6.13□□□□□ -1.43
COL4A3-201ENST00000304990 SYCNQ0VAF6 134 aa6.13□□□□□ -1.43
COL4A3-201ENST00000304990 PDZD11Q5EBL8 140 aa6.13□□□□□ -1.43
COL4A3-201ENST00000304990 ERASQ7Z444 233 aa6.13□□□□□ -1.43
COL4A3-201ENST00000304990 TMEM141Q96I45 108 aa6.13□□□□□ -1.43
COL4A3-201ENST00000304990 IGLV1-50A0A075B6I6 118 aa6.12□□□□□ -1.43
COL4A3-201ENST00000304990 IGLV4-3A0A075B6K6 122 aa6.12□□□□□ -1.43
COL4A3-201ENST00000304990 HBDP02042 147 aa6.12□□□□□ -1.43
COL4A3-201ENST00000304990 XCL1P47992 114 aa6.12□□□□□ -1.43
COL4A3-201ENST00000304990 FAM19A3Q7Z5A8 133 aa6.12□□□□□ -1.43
COL4A3-201ENST00000304990 BAGE3Q86Y29 109 aa6.12□□□□□ -1.43
COL4A3-201ENST00000304990 AMELXQ99217 191 aa6.12□□□□□ -1.43
COL4A3-201ENST00000304990 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
COL4A3-201ENST00000304990 C1orf196B1AJZ1 125 aa6.11□□□□□ -1.43
COL4A3-201ENST00000304990 SERF1AO75920 110 aa6.11□□□□□ -1.43
COL4A3-201ENST00000304990 IGLV7-43P04211 117 aa6.11□□□□□ -1.43
COL4A3-201ENST00000304990 FOXI1Q12951 378 aa6.11□□□□□ -1.43
COL4A3-201ENST00000304990 Q6ZUT4 128 aa6.11□□□□□ -1.43
COL4A3-201ENST00000304990 LINC00959A0A1B0GUT2 108 aa6.1□□□□□ -1.43
COL4A3-201ENST00000304990 H0Y9J4 135 aa6.1□□□□□ -1.43
COL4A3-201ENST00000304990 RPL18AQ02543 176 aaKnown RBP6.1□□□□□ -1.43
COL4A3-201ENST00000304990 C9orf116Q5BN46 136 aaPredicted RBP6.1□□□□□ -1.43
COL4A3-201ENST00000304990 PAPPA-AS1Q5QFB9 102 aa6.1□□□□□ -1.43
COL4A3-201ENST00000304990 LINC00173Q6ZV60 143 aa6.1□□□□□ -1.43
COL4A3-201ENST00000304990 PHF5AQ7RTV0 110 aaKnown RBP6.1□□□□□ -1.43
COL4A3-201ENST00000304990 PACRGQ96M98 296 aaPredicted RBP6.1□□□□□ -1.43
COL4A3-201ENST00000304990 SCGB3A1Q96QR1 104 aa6.1□□□□□ -1.43
COL4A3-201ENST00000304990 A0A087WZ39 114 aa6.09□□□□□ -1.43
COL4A3-201ENST00000304990 NUPR1O60356 82 aa6.09□□□□□ -1.43
COL4A3-201ENST00000304990 RPL13AP40429 203 aaKnown RBP6.09□□□□□ -1.43
COL4A3-201ENST00000304990 OPRPNQ99935 248 aaPredicted RBP6.09□□□□□ -1.43
COL4A3-201ENST00000304990 HSBP1O75506 76 aa6.08□□□□□ -1.44
COL4A3-201ENST00000304990 ATP5LO75964 103 aa6.08□□□□□ -1.44
COL4A3-201ENST00000304990 TSPAN13O95857 204 aa6.08□□□□□ -1.44
COL4A3-201ENST00000304990 MALP21145 153 aa6.08□□□□□ -1.44
COL4A3-201ENST00000304990 SS18Q15532 418 aa6.08□□□□□ -1.44
COL4A3-201ENST00000304990 IGLV4-69A0A075B6H9 119 aa6.07□□□□□ -1.44
COL4A3-201ENST00000304990 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.07□□□□□ -1.44
COL4A3-201ENST00000304990 PMCHL1Q16048 86 aa6.07□□□□□ -1.44
COL4A3-201ENST00000304990 CD164L2Q6UWJ8 174 aa6.07□□□□□ -1.44
COL4A3-201ENST00000304990 Q6ZN92 141 aa6.07□□□□□ -1.44
COL4A3-201ENST00000304990 TEX43Q6ZNM6 134 aa6.07□□□□□ -1.44
COL4A3-201ENST00000304990 CAMK2N2Q96S95 79 aa6.07□□□□□ -1.44
COL4A3-201ENST00000304990 VCX2Q9H322 139 aa6.07□□□□□ -1.44
COL4A3-201ENST00000304990 CST9LQ9H4G1 147 aa6.07□□□□□ -1.44
COL4A3-201ENST00000304990 TRAV12-1A0A0B4J245 112 aa6.06□□□□□ -1.44
COL4A3-201ENST00000304990 IGHV3OR16-9A0A0B4J2B5 98 aa6.06□□□□□ -1.44
COL4A3-201ENST00000304990 IFITM10A6NMD0 228 aa6.06□□□□□ -1.44
COL4A3-201ENST00000304990 APOMO95445 188 aa6.06□□□□□ -1.44
COL4A3-201ENST00000304990 PMVKQ15126 192 aa6.06□□□□□ -1.44
COL4A3-201ENST00000304990 RNASE13Q5GAN3 156 aaKnown RBP6.06□□□□□ -1.44
COL4A3-201ENST00000304990 LINC00242Q5T6M2 205 aa6.06□□□□□ -1.44
COL4A3-201ENST00000304990 LINC01561Q8N1V8 128 aa6.06□□□□□ -1.44
COL4A3-201ENST00000304990 FAM19A2Q8N3H0 131 aa6.06□□□□□ -1.44
COL4A3-201ENST00000304990 IGLV5-45A0A087WSX0 123 aa6.05□□□□□ -1.44
COL4A3-201ENST00000304990 TRAV13-1A0A0B4J241 112 aa6.05□□□□□ -1.44
COL4A3-201ENST00000304990 SEC11AP67812 179 aa6.05□□□□□ -1.44
COL4A3-201ENST00000304990 IFI27L1Q96BM0 104 aa6.05□□□□□ -1.44
COL4A3-201ENST00000304990 C2orf88Q9BSF0 95 aa6.05□□□□□ -1.44
COL4A3-201ENST00000304990 TINCRA0A1B0GVN0 87 aa6.04□□□□□ -1.44
COL4A3-201ENST00000304990 LEPROTL1O95214 131 aa6.04□□□□□ -1.44
COL4A3-201ENST00000304990 HSPB8Q9UJY1 196 aa6.04□□□□□ -1.44
COL4A3-201ENST00000304990 KRTAP1-4P0C5Y4 121 aa6.03□□□□□ -1.44
COL4A3-201ENST00000304990 IGLC3P0DOY3 106 aa6.03□□□□□ -1.44
COL4A3-201ENST00000304990 NDUFA6P56556 154 aa6.03□□□□□ -1.44
COL4A3-201ENST00000304990 UBE2BP63146 152 aa6.03□□□□□ -1.44
COL4A3-201ENST00000304990 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
COL4A3-201ENST00000304990 ZC2HC1BQ5TFG8 222 aa6.03□□□□□ -1.44
COL4A3-201ENST00000304990 COX7A2LO14548 114 aa6.02□□□□□ -1.45
COL4A3-201ENST00000304990 HERVK_113P63121 156 aa6.02□□□□□ -1.45
COL4A3-201ENST00000304990 FAM19A5Q7Z5A7 132 aaPredicted RBP6.02□□□□□ -1.45
COL4A3-201ENST00000304990 CDIP1Q9H305 208 aa6.02□□□□□ -1.45
COL4A3-201ENST00000304990 C5orf52A6NGY3 159 aa6.01□□□□□ -1.45
COL4A3-201ENST00000304990 HIST3H2BBQ8N257 126 aa6.01□□□□□ -1.45
COL4A3-201ENST00000304990 OR10D4PQ8NGN7 298 aa6□□□□□ -1.45
COL4A3-201ENST00000304990 C2orf48Q96LS8 159 aa6□□□□□ -1.45
COL4A3-201ENST00000304990 CRCT1Q9UGL9 99 aa6□□□□□ -1.45
COL4A3-201ENST00000304990 FAM168BA1KXE4 195 aa5.99□□□□□ -1.45
COL4A3-201ENST00000304990 F8VRH5 84 aa5.99□□□□□ -1.45
COL4A3-201ENST00000304990 F8WDY8 70 aa5.99□□□□□ -1.45
COL4A3-201ENST00000304990 SYS1-DBNDD2H3BUS1 97 aa5.99□□□□□ -1.45
COL4A3-201ENST00000304990 FABP4P15090 132 aa5.99□□□□□ -1.45
COL4A3-201ENST00000304990 SPAG11BQ08648 103 aa5.99□□□□□ -1.45
COL4A3-201ENST00000304990 KIAA0087Q14695 138 aa5.99□□□□□ -1.45
COL4A3-201ENST00000304990 C5orf38Q86SI9 138 aa5.99□□□□□ -1.45
COL4A3-201ENST00000304990 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
COL4A3-201ENST00000304990 HIST1H2BLQ99880 126 aa5.99□□□□□ -1.45
COL4A3-201ENST00000304990 MAP1LC3CQ9BXW4 147 aa5.99□□□□□ -1.45
COL4A3-201ENST00000304990 MRPL35Q9NZE8 188 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms