RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ABCA12Q86UK0 2595 aa9.99□□□□□ -0.81
PRKCB-201ENST00000303531 LRRK2Q5S007 2527 aa9.99□□□□□ -0.81
PRKCB-201ENST00000303531 EGFEM1PQ0D2K5 195 aa9.99□□□□□ -0.81
PRKCB-201ENST00000303531 Q6Q795 121 aa9.99□□□□□ -0.81
PRKCB-201ENST00000303531 RETNQ9HD89 108 aa9.98□□□□□ -0.81
PRKCB-201ENST00000303531 Q6ZSN1 163 aa9.98□□□□□ -0.81
PRKCB-201ENST00000303531 BRI3O95415 125 aa9.98□□□□□ -0.81
PRKCB-201ENST00000303531 CELA1Q9UNI1 258 aa9.97□□□□□ -0.81
PRKCB-201ENST00000303531 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
PRKCB-201ENST00000303531 JMJD1CQ15652 2540 aa9.97□□□□□ -0.81
PRKCB-201ENST00000303531 MRPL55Q7Z7F7 128 aaKnown RBP9.96□□□□□ -0.81
PRKCB-201ENST00000303531 PRR15LQ9BU68 103 aa9.96□□□□□ -0.81
PRKCB-201ENST00000303531 SETD2Q9BYW2 2564 aaPredicted RBP9.96□□□□□ -0.82
PRKCB-201ENST00000303531 A0A087WVE0 104 aa9.96□□□□□ -0.82
PRKCB-201ENST00000303531 M0QXV9 152 aa9.96□□□□□ -0.82
PRKCB-201ENST00000303531 COL5A1P20908 1838 aaPredicted RBP9.96□□□□□ -0.82
PRKCB-201ENST00000303531 PLA2G2AP14555 144 aa9.96□□□□□ -0.82
PRKCB-201ENST00000303531 LINC00474Q9P2X8 69 aa9.96□□□□□ -0.82
PRKCB-201ENST00000303531 Q8N9L7 120 aa9.96□□□□□ -0.82
PRKCB-201ENST00000303531 EP400Q96L91 3159 aa9.95□□□□□ -0.82
PRKCB-201ENST00000303531 BEAN1Q3B7T3 259 aa9.95□□□□□ -0.82
PRKCB-201ENST00000303531 C10orf25Q5T742 122 aa9.94□□□□□ -0.82
PRKCB-201ENST00000303531 LY6G6CO95867 125 aa9.94□□□□□ -0.82
PRKCB-201ENST00000303531 C1orf137Q5JT78 98 aa9.94□□□□□ -0.82
PRKCB-201ENST00000303531 C6orf223Q8N319 242 aa9.94□□□□□ -0.82
PRKCB-201ENST00000303531 USP9XQ93008 2570 aaPredicted RBP9.93□□□□□ -0.82
PRKCB-201ENST00000303531 A6NED7 52 aa9.93□□□□□ -0.82
PRKCB-201ENST00000303531 K7ERS5 55 aa9.93□□□□□ -0.82
PRKCB-201ENST00000303531 TRAV7A0A075B6U4 112 aa9.92□□□□□ -0.82
PRKCB-201ENST00000303531 Q6ZTC4 211 aa9.92□□□□□ -0.82
PRKCB-201ENST00000303531 REG3GQ6UW15 175 aa9.91□□□□□ -0.82
PRKCB-201ENST00000303531 ADAMTS20P59510 1910 aa9.91□□□□□ -0.82
PRKCB-201ENST00000303531 C16orf95Q9H693 158 aa9.89□□□□□ -0.83
PRKCB-201ENST00000303531 A0A1B0GUV1 79 aa9.88□□□□□ -0.83
PRKCB-201ENST00000303531 LINC00208Q96KT6 92 aa9.86□□□□□ -0.83
PRKCB-201ENST00000303531 ESRGQ1W209 222 aa9.86□□□□□ -0.83
PRKCB-201ENST00000303531 SMIM26A0A096LP01 95 aa9.86□□□□□ -0.83
PRKCB-201ENST00000303531 Q8N3U1 123 aa9.86□□□□□ -0.83
PRKCB-201ENST00000303531 KIF25-AS1Q9Y6Z4 181 aa9.86□□□□□ -0.83
PRKCB-201ENST00000303531 ANKRD11Q6UB99 2663 aaPredicted RBP9.86□□□□□ -0.83
PRKCB-201ENST00000303531 SERP1Q9Y6X1 66 aa9.85□□□□□ -0.83
PRKCB-201ENST00000303531 PTPRBP23467 1997 aa9.85□□□□□ -0.83
PRKCB-201ENST00000303531 LINC00575Q6W349 94 aa9.85□□□□□ -0.83
PRKCB-201ENST00000303531 A8MTW9 85 aa9.84□□□□□ -0.83
PRKCB-201ENST00000303531 LYPD5Q6UWN5 251 aa9.84□□□□□ -0.83
PRKCB-201ENST00000303531 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
PRKCB-201ENST00000303531 LINC00337Q8N6G1 96 aa9.83□□□□□ -0.84
PRKCB-201ENST00000303531 PKD1L2Q7Z442 2459 aa9.83□□□□□ -0.84
PRKCB-201ENST00000303531 USP9YO00507 2555 aaPredicted RBP9.83□□□□□ -0.84
PRKCB-201ENST00000303531 LINC01547P58512 204 aaPredicted RBP9.83□□□□□ -0.84
PRKCB-201ENST00000303531 PRYO14603 147 aa9.82□□□□□ -0.84
PRKCB-201ENST00000303531 SOSTDC1Q6X4U4 206 aa9.82□□□□□ -0.84
PRKCB-201ENST00000303531 CIRBP-AS1Q8TBR5 109 aa9.82□□□□□ -0.84
PRKCB-201ENST00000303531 Q9BRP9 147 aa9.82□□□□□ -0.84
PRKCB-201ENST00000303531 C2orf48Q96LS8 159 aa9.82□□□□□ -0.84
PRKCB-201ENST00000303531 IGHV6-1A0A0B4J1U7 121 aa9.81□□□□□ -0.84
PRKCB-201ENST00000303531 LINC01546A6NGU7 62 aa9.81□□□□□ -0.84
PRKCB-201ENST00000303531 LINC00846Q9NV44 126 aa9.81□□□□□ -0.84
PRKCB-201ENST00000303531 LINC01561Q8N1V8 128 aa9.81□□□□□ -0.84
PRKCB-201ENST00000303531 C11orf72Q8NBR9 251 aa9.81□□□□□ -0.84
PRKCB-201ENST00000303531 F8WDY8 70 aa9.8□□□□□ -0.84
PRKCB-201ENST00000303531 Q6ZRU5 148 aa9.8□□□□□ -0.84
PRKCB-201ENST00000303531 A0A087WSZ3 146 aa9.79□□□□□ -0.84
PRKCB-201ENST00000303531 Q6ZVQ6 151 aa9.79□□□□□ -0.84
PRKCB-201ENST00000303531 IGLV5-52A0A0A0MRZ9 124 aa9.78□□□□□ -0.84
PRKCB-201ENST00000303531 DEFB116Q30KQ4 102 aa9.78□□□□□ -0.84
PRKCB-201ENST00000303531 IGLV5-39A0A0G2JS06 123 aa9.77□□□□□ -0.84
PRKCB-201ENST00000303531 LINC01556Q5JQF7 62 aa9.77□□□□□ -0.84
PRKCB-201ENST00000303531 LINC00315P59091 139 aa9.77□□□□□ -0.85
PRKCB-201ENST00000303531 C1orf195Q5TG92 126 aa9.77□□□□□ -0.85
PRKCB-201ENST00000303531 CDIP1Q9H305 208 aa9.76□□□□□ -0.85
PRKCB-201ENST00000303531 CENPFP49454 3210 aa9.76□□□□□ -0.85
PRKCB-201ENST00000303531 FAM19A4Q96LR4 140 aa9.75□□□□□ -0.85
PRKCB-201ENST00000303531 TRBV7-7A0A0K0K1E9 115 aa9.75□□□□□ -0.85
PRKCB-201ENST00000303531 PCOTHQ58A44 107 aa9.75□□□□□ -0.85
PRKCB-201ENST00000303531 TRBV7-6A0A0J9YX20 115 aa9.75□□□□□ -0.85
PRKCB-201ENST00000303531 PRLHP81277 87 aa9.73□□□□□ -0.85
PRKCB-201ENST00000303531 RETNLBQ9BQ08 111 aa9.73□□□□□ -0.85
PRKCB-201ENST00000303531 IGHV3OR16-9A0A0B4J2B5 98 aa9.73□□□□□ -0.85
PRKCB-201ENST00000303531 TMEM254Q8TBM7 123 aa9.73□□□□□ -0.85
PRKCB-201ENST00000303531 CEP295Q9C0D2 2601 aa9.73□□□□□ -0.85
PRKCB-201ENST00000303531 Q8N2B8 174 aa9.73□□□□□ -0.85
PRKCB-201ENST00000303531 H0Y9P7 68 aa9.72□□□□□ -0.85
PRKCB-201ENST00000303531 SPTBN4Q9H254 2564 aa9.72□□□□□ -0.85
PRKCB-201ENST00000303531 HCG22E2RYF7 251 aa9.71□□□□□ -0.86
PRKCB-201ENST00000303531 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
PRKCB-201ENST00000303531 PSPHP1O15172 72 aa9.69□□□□□ -0.86
PRKCB-201ENST00000303531 CXCL6P80162 114 aa9.69□□□□□ -0.86
PRKCB-201ENST00000303531 SMCPP49901 116 aaPredicted RBP9.69□□□□□ -0.86
PRKCB-201ENST00000303531 PMAIP1Q13794 54 aa9.68□□□□□ -0.86
PRKCB-201ENST00000303531 FHL3Q13643 280 aa9.67□□□□□ -0.86
PRKCB-201ENST00000303531 SBSPONQ8IVN8 264 aa9.67□□□□□ -0.86
PRKCB-201ENST00000303531 SMCR5Q8TEV8 140 aa9.67□□□□□ -0.86
PRKCB-201ENST00000303531 ZNF462Q96JM2 2506 aa9.67□□□□□ -0.86
PRKCB-201ENST00000303531 KIAA0087Q14695 138 aa9.67□□□□□ -0.86
PRKCB-201ENST00000303531 C1orf134Q5TEV5 83 aa9.66□□□□□ -0.86
PRKCB-201ENST00000303531 Q9UF83 564 aa9.66□□□□□ -0.86
PRKCB-201ENST00000303531 IGLV5-45A0A087WSX0 123 aa9.66□□□□□ -0.86
PRKCB-201ENST00000303531 SPATA3Q8NHX4 192 aa9.66□□□□□ -0.86
PRKCB-201ENST00000303531 MTORP42345 2549 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms