RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 M0QXV9 152 aa11.5□□□□□ -0.57
BRD3-201ENST00000303407 ZNF706Q9Y5V0 76 aaPredicted RBP11.5□□□□□ -0.57
BRD3-201ENST00000303407 MPLKIPQ8TAP9 179 aa11.5□□□□□ -0.57
BRD3-201ENST00000303407 C7orf33Q8WU49 177 aa11.49□□□□□ -0.57
BRD3-201ENST00000303407 WFDC13Q8IUB5 93 aa11.49□□□□□ -0.57
BRD3-201ENST00000303407 IGLV5-39A0A0G2JS06 123 aa11.49□□□□□ -0.57
BRD3-201ENST00000303407 LINC00474Q9P2X8 69 aa11.48□□□□□ -0.57
BRD3-201ENST00000303407 CELA1Q9UNI1 258 aa11.48□□□□□ -0.57
BRD3-201ENST00000303407 IGLV9-49A0A0B4J1Y8 123 aa11.47□□□□□ -0.57
BRD3-201ENST00000303407 REG3GQ6UW15 175 aa11.47□□□□□ -0.57
BRD3-201ENST00000303407 HIVEP3Q5T1R4 2406 aa11.47□□□□□ -0.57
BRD3-201ENST00000303407 NDUFC2-KCTD14E9PQ53 114 aa11.47□□□□□ -0.57
BRD3-201ENST00000303407 FAM19A3Q7Z5A8 133 aa11.47□□□□□ -0.57
BRD3-201ENST00000303407 LINC00337Q8N6G1 96 aa11.46□□□□□ -0.57
BRD3-201ENST00000303407 A0A0U1RQV1 116 aa11.46□□□□□ -0.57
BRD3-201ENST00000303407 FHL3Q13643 280 aa11.46□□□□□ -0.58
BRD3-201ENST00000303407 FAM30AQ9NZY2 134 aa11.46□□□□□ -0.58
BRD3-201ENST00000303407 NDUFC1O43677 76 aa11.45□□□□□ -0.58
BRD3-201ENST00000303407 A0A087WVE0 104 aa11.45□□□□□ -0.58
BRD3-201ENST00000303407 LY6G6CO95867 125 aa11.45□□□□□ -0.58
BRD3-201ENST00000303407 KLK9Q2XQG4 91 aa11.45□□□□□ -0.58
BRD3-201ENST00000303407 CACNA1AO00555 2505 aa11.44□□□□□ -0.58
BRD3-201ENST00000303407 K7ERS5 55 aa11.44□□□□□ -0.58
BRD3-201ENST00000303407 C2orf48Q96LS8 159 aa11.44□□□□□ -0.58
BRD3-201ENST00000303407 F8WDY8 70 aa11.43□□□□□ -0.58
BRD3-201ENST00000303407 SORL1Q92673 2214 aa11.43□□□□□ -0.58
BRD3-201ENST00000303407 NUPR2A6NF83 97 aa11.43□□□□□ -0.58
BRD3-201ENST00000303407 ATP5EP56381 51 aaPredicted RBP11.43□□□□□ -0.58
BRD3-201ENST00000303407 C1orf137Q5JT78 98 aa11.42□□□□□ -0.58
BRD3-201ENST00000303407 C10orf25Q5T742 122 aa11.42□□□□□ -0.58
BRD3-201ENST00000303407 Q9UF83 564 aa11.42□□□□□ -0.58
BRD3-201ENST00000303407 TLN1Q9Y490 2541 aaKnown RBP11.42□□□□□ -0.58
BRD3-201ENST00000303407 A8MTW9 85 aa11.42□□□□□ -0.58
BRD3-201ENST00000303407 SPINK6Q6UWN8 80 aa11.42□□□□□ -0.58
BRD3-201ENST00000303407 LINC00575Q6W349 94 aa11.42□□□□□ -0.58
BRD3-201ENST00000303407 Q6ZRU5 148 aa11.41□□□□□ -0.58
BRD3-201ENST00000303407 NOTCH2Q04721 2471 aa11.4□□□□□ -0.58
BRD3-201ENST00000303407 IGHV3OR16-9A0A0B4J2B5 98 aa11.4□□□□□ -0.59
BRD3-201ENST00000303407 IGLV5-45A0A087WSX0 123 aa11.39□□□□□ -0.59
BRD3-201ENST00000303407 AGRNO00468 2067 aa11.39□□□□□ -0.59
BRD3-201ENST00000303407 CDIP1Q9H305 208 aa11.38□□□□□ -0.59
BRD3-201ENST00000303407 TRAV7A0A075B6U4 112 aa11.37□□□□□ -0.59
BRD3-201ENST00000303407 PRYO14603 147 aa11.37□□□□□ -0.59
BRD3-201ENST00000303407 CASC2Q6XLA1 102 aa11.36□□□□□ -0.59
BRD3-201ENST00000303407 SMCPP49901 116 aaPredicted RBP11.35□□□□□ -0.59
BRD3-201ENST00000303407 FSHBP01225 129 aa11.35□□□□□ -0.59
BRD3-201ENST00000303407 LINC00846Q9NV44 126 aa11.35□□□□□ -0.59
BRD3-201ENST00000303407 X6R8D5 127 aa11.35□□□□□ -0.59
BRD3-201ENST00000303407 PRR4Q16378 134 aa11.34□□□□□ -0.59
BRD3-201ENST00000303407 PRR15LQ9BU68 103 aa11.33□□□□□ -0.6
BRD3-201ENST00000303407 CCDC168Q8NDH2 2452 aa11.33□□□□□ -0.6
BRD3-201ENST00000303407 SOSTDC1Q6X4U4 206 aa11.32□□□□□ -0.6
BRD3-201ENST00000303407 PRO0461Q9UI25 63 aa11.31□□□□□ -0.6
BRD3-201ENST00000303407 Q9BRP9 147 aa11.31□□□□□ -0.6
BRD3-201ENST00000303407 C1orf195Q5TG92 126 aa11.3□□□□□ -0.6
BRD3-201ENST00000303407 Q6ZVQ6 151 aa11.3□□□□□ -0.6
BRD3-201ENST00000303407 Q8N3U1 123 aa11.3□□□□□ -0.6
BRD3-201ENST00000303407 ESRGQ1W209 222 aa11.29□□□□□ -0.6
BRD3-201ENST00000303407 IGLV5-52A0A0A0MRZ9 124 aa11.29□□□□□ -0.6
BRD3-201ENST00000303407 FAM218AQ96MZ4 157 aa11.29□□□□□ -0.6
BRD3-201ENST00000303407 C6orf48Q9UBA6 75 aa11.28□□□□□ -0.6
BRD3-201ENST00000303407 LINC01556Q5JQF7 62 aa11.28□□□□□ -0.6
BRD3-201ENST00000303407 C22orf24Q9Y442 160 aa11.27□□□□□ -0.61
BRD3-201ENST00000303407 TRBV7-7A0A0K0K1E9 115 aa11.27□□□□□ -0.61
BRD3-201ENST00000303407 A6NED7 52 aa11.26□□□□□ -0.61
BRD3-201ENST00000303407 LINC01547P58512 204 aaPredicted RBP11.26□□□□□ -0.61
BRD3-201ENST00000303407 SBSPONQ8IVN8 264 aa11.25□□□□□ -0.61
BRD3-201ENST00000303407 PRLHP81277 87 aa11.24□□□□□ -0.61
BRD3-201ENST00000303407 BPTFQ12830 3046 aa11.24□□□□□ -0.61
BRD3-201ENST00000303407 PIEZO1Q92508 2521 aa11.24□□□□□ -0.61
BRD3-201ENST00000303407 CIRBP-AS1Q8TBR5 109 aa11.24□□□□□ -0.61
BRD3-201ENST00000303407 CEP350Q5VT06 3117 aa11.23□□□□□ -0.61
BRD3-201ENST00000303407 A0A087WSZ3 146 aa11.23□□□□□ -0.61
BRD3-201ENST00000303407 SONP18583 2426 aaKnown RBP11.23□□□□□ -0.61
BRD3-201ENST00000303407 DEFB116Q30KQ4 102 aa11.22□□□□□ -0.61
BRD3-201ENST00000303407 LITAFQ99732 161 aa11.22□□□□□ -0.61
BRD3-201ENST00000303407 SERP1Q9Y6X1 66 aa11.22□□□□□ -0.61
BRD3-201ENST00000303407 H3BNG1 76 aa11.22□□□□□ -0.61
BRD3-201ENST00000303407 Q8N9L7 120 aa11.21□□□□□ -0.61
BRD3-201ENST00000303407 LINC00208Q96KT6 92 aa11.21□□□□□ -0.62
BRD3-201ENST00000303407 IGHV6-1A0A0B4J1U7 121 aa11.21□□□□□ -0.62
BRD3-201ENST00000303407 Q8NAQ8 132 aa11.21□□□□□ -0.62
BRD3-201ENST00000303407 C2CD3Q4AC94 2353 aa11.2□□□□□ -0.62
BRD3-201ENST00000303407 KIAA0087Q14695 138 aa11.2□□□□□ -0.62
BRD3-201ENST00000303407 CXCL6P80162 114 aa11.2□□□□□ -0.62
BRD3-201ENST00000303407 SPATA3Q8NHX4 192 aa11.2□□□□□ -0.62
BRD3-201ENST00000303407 SMCR5Q8TEV8 140 aa11.19□□□□□ -0.62
BRD3-201ENST00000303407 C1orf134Q5TEV5 83 aa11.18□□□□□ -0.62
BRD3-201ENST00000303407 ANKRD11Q6UB99 2663 aaPredicted RBP11.18□□□□□ -0.62
BRD3-201ENST00000303407 ABCA2Q9BZC7 2435 aa11.18□□□□□ -0.62
BRD3-201ENST00000303407 SMIM26A0A096LP01 95 aa11.18□□□□□ -0.62
BRD3-201ENST00000303407 CEP295Q9C0D2 2601 aa11.17□□□□□ -0.62
BRD3-201ENST00000303407 ELOF1P60002 83 aaKnown RBP11.16□□□□□ -0.62
BRD3-201ENST00000303407 LINC00167Q96N53 147 aa11.16□□□□□ -0.62
BRD3-201ENST00000303407 KRTAP24-1Q3LI83 254 aa11.16□□□□□ -0.62
BRD3-201ENST00000303407 A0A096LNT2 108 aa11.16□□□□□ -0.62
BRD3-201ENST00000303407 HCG22E2RYF7 251 aa11.15□□□□□ -0.62
BRD3-201ENST00000303407 TRBV7-6A0A0J9YX20 115 aa11.14□□□□□ -0.63
BRD3-201ENST00000303407 NHLRC4P0CG21 123 aaPredicted RBP11.14□□□□□ -0.63
BRD3-201ENST00000303407 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms