RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SORL1Q92673 2214 aa9.66□□□□□ -0.86
CHRFAM7A-201ENST00000299847 IGLV1-51P01701 117 aa9.66□□□□□ -0.86
CHRFAM7A-201ENST00000299847 EGFEM1PQ0D2K5 195 aa9.66□□□□□ -0.86
CHRFAM7A-201ENST00000299847 PRLHP81277 87 aa9.65□□□□□ -0.86
CHRFAM7A-201ENST00000299847 C1orf195Q5TG92 126 aa9.64□□□□□ -0.87
CHRFAM7A-201ENST00000299847 Q9UF83 564 aa9.64□□□□□ -0.87
CHRFAM7A-201ENST00000299847 A0A087WSZ3 146 aa9.64□□□□□ -0.87
CHRFAM7A-201ENST00000299847 CPAMD8Q8IZJ3 1885 aa9.63□□□□□ -0.87
CHRFAM7A-201ENST00000299847 PRYO14603 147 aa9.63□□□□□ -0.87
CHRFAM7A-201ENST00000299847 TRAV7A0A075B6U4 112 aa9.62□□□□□ -0.87
CHRFAM7A-201ENST00000299847 LYPD5Q6UWN5 251 aa9.62□□□□□ -0.87
CHRFAM7A-201ENST00000299847 LRP4O75096 1905 aa9.62□□□□□ -0.87
CHRFAM7A-201ENST00000299847 COL5A1P20908 1838 aaPredicted RBP9.61□□□□□ -0.87
CHRFAM7A-201ENST00000299847 Q8N3U1 123 aa9.61□□□□□ -0.87
CHRFAM7A-201ENST00000299847 CSPG4Q6UVK1 2322 aa9.61□□□□□ -0.87
CHRFAM7A-201ENST00000299847 Q6ZRU5 148 aa9.61□□□□□ -0.87
CHRFAM7A-201ENST00000299847 PRRC2AP48634 2157 aaKnown RBP9.61□□□□□ -0.87
CHRFAM7A-201ENST00000299847 BDP1A6H8Y1 2624 aa9.6□□□□□ -0.87
CHRFAM7A-201ENST00000299847 H0Y9P7 68 aa9.6□□□□□ -0.87
CHRFAM7A-201ENST00000299847 SPG11Q96JI7 2443 aa9.6□□□□□ -0.87
CHRFAM7A-201ENST00000299847 CRYGAP11844 174 aa9.6□□□□□ -0.87
CHRFAM7A-201ENST00000299847 A0A096LNJ9 63 aa9.59□□□□□ -0.87
CHRFAM7A-201ENST00000299847 AMELXQ99217 191 aa9.59□□□□□ -0.87
CHRFAM7A-201ENST00000299847 CUL9Q8IWT3 2517 aa9.59□□□□□ -0.87
CHRFAM7A-201ENST00000299847 C1orf134Q5TEV5 83 aa9.58□□□□□ -0.88
CHRFAM7A-201ENST00000299847 PMAIP1Q13794 54 aa9.57□□□□□ -0.88
CHRFAM7A-201ENST00000299847 PTPN13Q12923 2485 aa9.57□□□□□ -0.88
CHRFAM7A-201ENST00000299847 HCG22E2RYF7 251 aa9.57□□□□□ -0.88
CHRFAM7A-201ENST00000299847 TRBV7-7A0A0K0K1E9 115 aa9.57□□□□□ -0.88
CHRFAM7A-201ENST00000299847 HIVEP3Q5T1R4 2406 aa9.56□□□□□ -0.88
CHRFAM7A-201ENST00000299847 SMIM26A0A096LP01 95 aa9.56□□□□□ -0.88
CHRFAM7A-201ENST00000299847 ADAMTS20P59510 1910 aa9.55□□□□□ -0.88
CHRFAM7A-201ENST00000299847 C2orf48Q96LS8 159 aa9.54□□□□□ -0.88
CHRFAM7A-201ENST00000299847 C16orf95Q9H693 158 aa9.54□□□□□ -0.88
CHRFAM7A-201ENST00000299847 LINC00846Q9NV44 126 aa9.54□□□□□ -0.88
CHRFAM7A-201ENST00000299847 ANKHD1Q8IWZ3 2542 aaKnown RBP9.54□□□□□ -0.88
CHRFAM7A-201ENST00000299847 LINC00337Q8N6G1 96 aa9.53□□□□□ -0.88
CHRFAM7A-201ENST00000299847 C22orf24Q9Y442 160 aa9.53□□□□□ -0.88
CHRFAM7A-201ENST00000299847 MUC7Q8TAX7 377 aa9.52□□□□□ -0.89
CHRFAM7A-201ENST00000299847 IGKV2D-30A0A075B6S6 120 aa9.52□□□□□ -0.89
CHRFAM7A-201ENST00000299847 IGKV2-30P06310 120 aa9.52□□□□□ -0.89
CHRFAM7A-201ENST00000299847 AGRNO00468 2067 aa9.52□□□□□ -0.89
CHRFAM7A-201ENST00000299847 SMCR5Q8TEV8 140 aa9.52□□□□□ -0.89
CHRFAM7A-201ENST00000299847 KIAA0087Q14695 138 aa9.5□□□□□ -0.89
CHRFAM7A-201ENST00000299847 SMIM29Q86T20 159 aa9.5□□□□□ -0.89
CHRFAM7A-201ENST00000299847 TET2Q6N021 2002 aaPredicted RBP9.5□□□□□ -0.89
CHRFAM7A-201ENST00000299847 CSDC2Q9Y534 153 aaKnown RBP9.5□□□□□ -0.89
CHRFAM7A-201ENST00000299847 FHL3Q13643 280 aa9.47□□□□□ -0.89
CHRFAM7A-201ENST00000299847 SPACA4Q8TDM5 124 aa9.47□□□□□ -0.89
CHRFAM7A-201ENST00000299847 C7orf65Q6ZTY9 151 aa9.47□□□□□ -0.89
CHRFAM7A-201ENST00000299847 SONP18583 2426 aaKnown RBP9.47□□□□□ -0.89
CHRFAM7A-201ENST00000299847 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
CHRFAM7A-201ENST00000299847 CHTF8P0CG12 524 aa9.46□□□□□ -0.89
CHRFAM7A-201ENST00000299847 NOTCH2Q04721 2471 aa9.46□□□□□ -0.9
CHRFAM7A-201ENST00000299847 TMEM254Q8TBM7 123 aa9.46□□□□□ -0.9
CHRFAM7A-201ENST00000299847 MDFIQ99750 246 aa9.46□□□□□ -0.9
CHRFAM7A-201ENST00000299847 C1orf64Q8NEQ6 169 aa9.45□□□□□ -0.9
CHRFAM7A-201ENST00000299847 MOBPQ13875 183 aa9.45□□□□□ -0.9
CHRFAM7A-201ENST00000299847 NAV3Q8IVL0 2385 aa9.44□□□□□ -0.9
CHRFAM7A-201ENST00000299847 C11orf72Q8NBR9 251 aa9.44□□□□□ -0.9
CHRFAM7A-201ENST00000299847 FSHBP01225 129 aa9.43□□□□□ -0.9
CHRFAM7A-201ENST00000299847 Q8N2B8 174 aa9.43□□□□□ -0.9
CHRFAM7A-201ENST00000299847 COX8CQ7Z4L0 72 aa9.43□□□□□ -0.9
CHRFAM7A-201ENST00000299847 SPATA3Q8NHX4 192 aa9.42□□□□□ -0.9
CHRFAM7A-201ENST00000299847 PHF5AQ7RTV0 110 aaKnown RBP9.41□□□□□ -0.9
CHRFAM7A-201ENST00000299847 KIF25-AS1Q9Y6Z4 181 aa9.41□□□□□ -0.9
CHRFAM7A-201ENST00000299847 LINC00167Q96N53 147 aa9.41□□□□□ -0.9
CHRFAM7A-201ENST00000299847 C6orf48Q9UBA6 75 aa9.41□□□□□ -0.9
CHRFAM7A-201ENST00000299847 ACACBO00763 2458 aa9.4□□□□□ -0.9
CHRFAM7A-201ENST00000299847 FAM218AQ96MZ4 157 aa9.4□□□□□ -0.9
CHRFAM7A-201ENST00000299847 C10orf142B7Z368 130 aa9.4□□□□□ -0.91
CHRFAM7A-201ENST00000299847 CDIP1Q9H305 208 aa9.39□□□□□ -0.91
CHRFAM7A-201ENST00000299847 LIMD2Q9BT23 127 aa9.38□□□□□ -0.91
CHRFAM7A-201ENST00000299847 RPL37AP61513 92 aaKnown RBP9.38□□□□□ -0.91
CHRFAM7A-201ENST00000299847 TTC28Q96AY4 2481 aa9.37□□□□□ -0.91
CHRFAM7A-201ENST00000299847 IGLV8-61A0A075B6I0 122 aa9.37□□□□□ -0.91
CHRFAM7A-201ENST00000299847 PIEZO2Q9H5I5 2752 aa9.36□□□□□ -0.91
CHRFAM7A-201ENST00000299847 F8WDY8 70 aa9.35□□□□□ -0.91
CHRFAM7A-201ENST00000299847 ST20-AS1Q8NBB2 130 aa9.35□□□□□ -0.91
CHRFAM7A-201ENST00000299847 IGLV5-39A0A0G2JS06 123 aa9.34□□□□□ -0.91
CHRFAM7A-201ENST00000299847 SPAG11AQ6PDA7 123 aa9.34□□□□□ -0.91
CHRFAM7A-201ENST00000299847 CXCL6P80162 114 aa9.34□□□□□ -0.91
CHRFAM7A-201ENST00000299847 LINC01561Q8N1V8 128 aa9.34□□□□□ -0.91
CHRFAM7A-201ENST00000299847 hDV103S1A0JD37 113 aa9.33□□□□□ -0.92
CHRFAM7A-201ENST00000299847 IGHV3OR16-9A0A0B4J2B5 98 aa9.33□□□□□ -0.92
CHRFAM7A-201ENST00000299847 EP400Q96L91 3159 aa9.33□□□□□ -0.92
CHRFAM7A-201ENST00000299847 A0A1B0GU69 56 aa9.33□□□□□ -0.92
CHRFAM7A-201ENST00000299847 LINC00315P59091 139 aa9.33□□□□□ -0.92
CHRFAM7A-201ENST00000299847 SMCPP49901 116 aaPredicted RBP9.32□□□□□ -0.92
CHRFAM7A-201ENST00000299847 PLA2G1BP04054 148 aaKnown RBP9.31□□□□□ -0.92
CHRFAM7A-201ENST00000299847 ABCA2Q9BZC7 2435 aa9.31□□□□□ -0.92
CHRFAM7A-201ENST00000299847 COL27A1Q8IZC6 1860 aaPredicted RBP9.31□□□□□ -0.92
CHRFAM7A-201ENST00000299847 C4orf26Q17RF5 130 aa9.3□□□□□ -0.92
CHRFAM7A-201ENST00000299847 FAM19A4Q96LR4 140 aa9.3□□□□□ -0.92
CHRFAM7A-201ENST00000299847 PTPRBP23467 1997 aa9.3□□□□□ -0.92
CHRFAM7A-201ENST00000299847 ATRXP46100 2492 aa9.29□□□□□ -0.92
CHRFAM7A-201ENST00000299847 LINC01546A6NGU7 62 aa9.29□□□□□ -0.92
CHRFAM7A-201ENST00000299847 RTL8CO15255 209 aa9.29□□□□□ -0.92
CHRFAM7A-201ENST00000299847 LINC00476Q8WZB0 136 aa9.29□□□□□ -0.92
CHRFAM7A-201ENST00000299847 FAM168BA1KXE4 195 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms