RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZNF580Q9UK33 172 aa8.71□□□□□ -1.01
SYNGAP1-201ENST00000293748 TSHBP01222 138 aa8.71□□□□□ -1.02
SYNGAP1-201ENST00000293748 TEP1Q99973 2627 aaKnown RBP8.71□□□□□ -1.02
SYNGAP1-201ENST00000293748 FAM19A3Q7Z5A8 133 aa8.71□□□□□ -1.02
SYNGAP1-201ENST00000293748 RELNP78509 3460 aa8.7□□□□□ -1.02
SYNGAP1-201ENST00000293748 SMIM9A6NGZ8 99 aa8.7□□□□□ -1.02
SYNGAP1-201ENST00000293748 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
SYNGAP1-201ENST00000293748 RNASE3P12724 160 aaKnown RBP8.7□□□□□ -1.02
SYNGAP1-201ENST00000293748 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
SYNGAP1-201ENST00000293748 TRBV6-4A0A1B0GX49 114 aa8.7□□□□□ -1.02
SYNGAP1-201ENST00000293748 Q6JHZ5 121 aa8.7□□□□□ -1.02
SYNGAP1-201ENST00000293748 Q6ZS46 218 aa8.7□□□□□ -1.02
SYNGAP1-201ENST00000293748 TEX15Q9BXT5 2789 aa8.7□□□□□ -1.02
SYNGAP1-201ENST00000293748 SEC61GP60059 68 aa8.7□□□□□ -1.02
SYNGAP1-201ENST00000293748 URB1-AS1Q96HZ7 61 aa8.7□□□□□ -1.02
SYNGAP1-201ENST00000293748 TRBV6-8A0A0A6YYG3 113 aa8.69□□□□□ -1.02
SYNGAP1-201ENST00000293748 F8W735 103 aaPredicted RBP8.69□□□□□ -1.02
SYNGAP1-201ENST00000293748 HIVEP1P15822 2718 aa8.69□□□□□ -1.02
SYNGAP1-201ENST00000293748 MRPS36P82909 103 aaKnown RBP8.69□□□□□ -1.02
SYNGAP1-201ENST00000293748 C11orf21Q9P2W6 132 aa8.69□□□□□ -1.02
SYNGAP1-201ENST00000293748 LYRM9A8MSI8 78 aa8.69□□□□□ -1.02
SYNGAP1-201ENST00000293748 CCKP06307 115 aa8.69□□□□□ -1.02
SYNGAP1-201ENST00000293748 DEFB4AO15263 64 aa8.68□□□□□ -1.02
SYNGAP1-201ENST00000293748 DEFB114Q30KQ6 69 aa8.68□□□□□ -1.02
SYNGAP1-201ENST00000293748 IGKV4-1P06312 121 aa8.68□□□□□ -1.02
SYNGAP1-201ENST00000293748 UBE2D1P51668 147 aa8.68□□□□□ -1.02
SYNGAP1-201ENST00000293748 B9D2Q9BPU9 175 aa8.68□□□□□ -1.02
SYNGAP1-201ENST00000293748 MDFIQ99750 246 aa8.68□□□□□ -1.02
SYNGAP1-201ENST00000293748 CELSR2Q9HCU4 2923 aa8.68□□□□□ -1.02
SYNGAP1-201ENST00000293748 KLLNB2CW77 178 aa8.68□□□□□ -1.02
SYNGAP1-201ENST00000293748 SMIM26A0A096LP01 95 aa8.67□□□□□ -1.02
SYNGAP1-201ENST00000293748 HIGD2AQ9BW72 106 aa8.66□□□□□ -1.02
SYNGAP1-201ENST00000293748 PDZD2O15018 2839 aa8.66□□□□□ -1.02
SYNGAP1-201ENST00000293748 A8MZ25 164 aa8.66□□□□□ -1.02
SYNGAP1-201ENST00000293748 FBN2P35556 2912 aa8.66□□□□□ -1.02
SYNGAP1-201ENST00000293748 Q6ZQY7 126 aa8.66□□□□□ -1.02
SYNGAP1-201ENST00000293748 IGIPA6NJ69 53 aa8.65□□□□□ -1.02
SYNGAP1-201ENST00000293748 CRYGDP07320 174 aa8.65□□□□□ -1.02
SYNGAP1-201ENST00000293748 C9orf85Q96MD7 179 aa8.65□□□□□ -1.02
SYNGAP1-201ENST00000293748 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.02
SYNGAP1-201ENST00000293748 GAS8-AS1O95177 125 aa8.65□□□□□ -1.02
SYNGAP1-201ENST00000293748 PRR9Q5T870 116 aa8.64□□□□□ -1.03
SYNGAP1-201ENST00000293748 SMIM11BQ8TCY0 68 aa8.64□□□□□ -1.03
SYNGAP1-201ENST00000293748 CRIP2P52943 208 aaPredicted RBP8.64□□□□□ -1.03
SYNGAP1-201ENST00000293748 UBE2D3P61077 147 aa8.64□□□□□ -1.03
SYNGAP1-201ENST00000293748 UBE2D2P62837 147 aa8.64□□□□□ -1.03
SYNGAP1-201ENST00000293748 C14orf177Q52M58 125 aa8.64□□□□□ -1.03
SYNGAP1-201ENST00000293748 C4orf48Q5BLP8 95 aa8.64□□□□□ -1.03
SYNGAP1-201ENST00000293748 MUC7Q8TAX7 377 aa8.64□□□□□ -1.03
SYNGAP1-201ENST00000293748 LINC00526Q96FQ7 95 aa8.64□□□□□ -1.03
SYNGAP1-201ENST00000293748 SNURFQ9Y675 71 aa8.64□□□□□ -1.03
SYNGAP1-201ENST00000293748 XAGE1AQ9HD64 81 aa8.64□□□□□ -1.03
SYNGAP1-201ENST00000293748 HRNRQ86YZ3 2850 aaPredicted RBP8.63□□□□□ -1.03
SYNGAP1-201ENST00000293748 LINC00694P0DN24 101 aa8.63□□□□□ -1.03
SYNGAP1-201ENST00000293748 CD164L2Q6UWJ8 174 aa8.63□□□□□ -1.03
SYNGAP1-201ENST00000293748 C1orf158Q8N1D5 194 aa8.62□□□□□ -1.03
SYNGAP1-201ENST00000293748 POM121L12Q8N7R1 296 aa8.62□□□□□ -1.03
SYNGAP1-201ENST00000293748 TRAV7A0A075B6U4 112 aa8.61□□□□□ -1.03
SYNGAP1-201ENST00000293748 MRGPRG-AS1Q2M3A8 158 aa8.61□□□□□ -1.03
SYNGAP1-201ENST00000293748 M0QXV9 152 aa8.61□□□□□ -1.03
SYNGAP1-201ENST00000293748 C1orf195Q5TG92 126 aa8.61□□□□□ -1.03
SYNGAP1-201ENST00000293748 CRYBG3Q68DQ2 2970 aa8.61□□□□□ -1.03
SYNGAP1-201ENST00000293748 IGKV2-24A0A0C4DH68 120 aa8.6□□□□□ -1.03
SYNGAP1-201ENST00000293748 IGLV1-40P01703 118 aa8.6□□□□□ -1.03
SYNGAP1-201ENST00000293748 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
SYNGAP1-201ENST00000293748 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.6□□□□□ -1.03
SYNGAP1-201ENST00000293748 SERP1Q9Y6X1 66 aa8.6□□□□□ -1.03
SYNGAP1-201ENST00000293748 C3orf84H3BNL1 204 aa8.6□□□□□ -1.03
SYNGAP1-201ENST00000293748 COX17Q14061 63 aa8.6□□□□□ -1.03
SYNGAP1-201ENST00000293748 M0R378 163 aa8.59□□□□□ -1.03
SYNGAP1-201ENST00000293748 FAM19A1Q7Z5A9 133 aa8.59□□□□□ -1.03
SYNGAP1-201ENST00000293748 BRI3O95415 125 aa8.59□□□□□ -1.03
SYNGAP1-201ENST00000293748 DHRS4-AS1Q9P1J3 65 aa8.59□□□□□ -1.03
SYNGAP1-201ENST00000293748 MIFP14174 115 aa8.59□□□□□ -1.03
SYNGAP1-201ENST00000293748 CASC2Q6XLA1 102 aa8.59□□□□□ -1.03
SYNGAP1-201ENST00000293748 COX8CQ7Z4L0 72 aa8.59□□□□□ -1.03
SYNGAP1-201ENST00000293748 LINC00959A0A1B0GUT2 108 aa8.59□□□□□ -1.03
SYNGAP1-201ENST00000293748 NTM-AS1Q6ZSK4 140 aa8.59□□□□□ -1.03
SYNGAP1-201ENST00000293748 KIR2DL5BQ8NHK3 375 aa8.59□□□□□ -1.03
SYNGAP1-201ENST00000293748 WFDC10BQ8IUB3 73 aa8.58□□□□□ -1.04
SYNGAP1-201ENST00000293748 PRR15LQ9BU68 103 aa8.58□□□□□ -1.04
SYNGAP1-201ENST00000293748 RPL28P46779 137 aaKnown RBP8.58□□□□□ -1.04
SYNGAP1-201ENST00000293748 C10orf99Q6UWK7 81 aa8.58□□□□□ -1.04
SYNGAP1-201ENST00000293748 A6NED7 52 aa8.58□□□□□ -1.04
SYNGAP1-201ENST00000293748 HRCT1Q6UXD1 115 aa8.58□□□□□ -1.04
SYNGAP1-201ENST00000293748 Q8IZM0 81 aa8.58□□□□□ -1.04
SYNGAP1-201ENST00000293748 C11orf45Q8TAV5 145 aa8.57□□□□□ -1.04
SYNGAP1-201ENST00000293748 IGLV4-69A0A075B6H9 119 aa8.57□□□□□ -1.04
SYNGAP1-201ENST00000293748 A0A096LNJ9 63 aa8.57□□□□□ -1.04
SYNGAP1-201ENST00000293748 DCANP1Q8TF63 244 aa8.57□□□□□ -1.04
SYNGAP1-201ENST00000293748 CDC42SE2Q9NRR3 84 aa8.57□□□□□ -1.04
SYNGAP1-201ENST00000293748 LINC00242Q5T6M2 205 aa8.56□□□□□ -1.04
SYNGAP1-201ENST00000293748 K7ERS5 55 aa8.56□□□□□ -1.04
SYNGAP1-201ENST00000293748 A0A096LNI7 61 aa8.56□□□□□ -1.04
SYNGAP1-201ENST00000293748 SETD2Q9BYW2 2564 aaPredicted RBP8.55□□□□□ -1.04
SYNGAP1-201ENST00000293748 ZNF73O43830 326 aaPredicted RBP8.55□□□□□ -1.04
SYNGAP1-201ENST00000293748 NSD1Q96L73 2696 aaPredicted RBP8.55□□□□□ -1.04
SYNGAP1-201ENST00000293748 KLK5Q9Y337 293 aaPredicted RBP8.55□□□□□ -1.04
SYNGAP1-201ENST00000293748 ATRQ13535 2644 aa8.54□□□□□ -1.04
SYNGAP1-201ENST00000293748 SMIM1B2RUZ4 78 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 338.7 ms