RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 MRPL35Q9NZE8 188 aaKnown RBP8.6□□□□□ -1.03
PSMB4-201ENST00000290541 ZNF22P17026 224 aaPredicted RBP8.59□□□□□ -1.03
PSMB4-201ENST00000290541 SPAG11BQ08648 103 aa8.59□□□□□ -1.03
PSMB4-201ENST00000290541 KIAA0087Q14695 138 aa8.59□□□□□ -1.03
PSMB4-201ENST00000290541 ODF1Q14990 250 aa8.59□□□□□ -1.03
PSMB4-201ENST00000290541 ZNF561-AS1K7EIQ3 104 aa8.58□□□□□ -1.04
PSMB4-201ENST00000290541 APOMO95445 188 aa8.58□□□□□ -1.04
PSMB4-201ENST00000290541 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
PSMB4-201ENST00000290541 GCSHP23434 173 aa8.58□□□□□ -1.04
PSMB4-201ENST00000290541 CNBPP62633 177 aaKnown RBP8.58□□□□□ -1.04
PSMB4-201ENST00000290541 CDPF1Q6NVV7 123 aa8.58□□□□□ -1.04
PSMB4-201ENST00000290541 LINC01561Q8N1V8 128 aa8.58□□□□□ -1.04
PSMB4-201ENST00000290541 HIST3H2BBQ8N257 126 aa8.58□□□□□ -1.04
PSMB4-201ENST00000290541 PMCHL2Q9BQD1 86 aa8.58□□□□□ -1.04
PSMB4-201ENST00000290541 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
PSMB4-201ENST00000290541 F8VRH5 84 aa8.57□□□□□ -1.04
PSMB4-201ENST00000290541 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
PSMB4-201ENST00000290541 OR10D4PQ8NGN7 298 aa8.57□□□□□ -1.04
PSMB4-201ENST00000290541 SNRPEP62304 92 aaKnown RBP8.56□□□□□ -1.04
PSMB4-201ENST00000290541 C10orf25Q5T742 122 aa8.56□□□□□ -1.04
PSMB4-201ENST00000290541 Q6ZRU5 148 aa8.56□□□□□ -1.04
PSMB4-201ENST00000290541 C9orf163Q8N9P6 203 aa8.56□□□□□ -1.04
PSMB4-201ENST00000290541 PACRGQ96M98 296 aaPredicted RBP8.56□□□□□ -1.04
PSMB4-201ENST00000290541 MAP1LC3CQ9BXW4 147 aa8.56□□□□□ -1.04
PSMB4-201ENST00000290541 TOMM7Q9P0U1 55 aa8.56□□□□□ -1.04
PSMB4-201ENST00000290541 SYS1-DBNDD2H3BUS1 97 aa8.55□□□□□ -1.04
PSMB4-201ENST00000290541 S100A6P06703 90 aa8.55□□□□□ -1.04
PSMB4-201ENST00000290541 C3orf79P0CE67 100 aa8.55□□□□□ -1.04
PSMB4-201ENST00000290541 HAMPP81172 84 aa8.55□□□□□ -1.04
PSMB4-201ENST00000290541 TMEM170BQ5T4T1 132 aa8.55□□□□□ -1.04
PSMB4-201ENST00000290541 FAM30AQ9NZY2 134 aa8.55□□□□□ -1.04
PSMB4-201ENST00000290541 OXTP01178 125 aa8.54□□□□□ -1.04
PSMB4-201ENST00000290541 SYCNQ0VAF6 134 aa8.54□□□□□ -1.04
PSMB4-201ENST00000290541 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
PSMB4-201ENST00000290541 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
PSMB4-201ENST00000290541 C2orf48Q96LS8 159 aa8.54□□□□□ -1.04
PSMB4-201ENST00000290541 CARD19Q96LW7 228 aa8.54□□□□□ -1.04
PSMB4-201ENST00000290541 CAMK2N2Q96S95 79 aa8.54□□□□□ -1.04
PSMB4-201ENST00000290541 HIST1H2BLQ99880 126 aa8.54□□□□□ -1.04
PSMB4-201ENST00000290541 LOC100996750A0A140TA64 210 aa8.53□□□□□ -1.04
PSMB4-201ENST00000290541 C5orf52A6NGY3 159 aa8.53□□□□□ -1.04
PSMB4-201ENST00000290541 H3BRM9 83 aa8.53□□□□□ -1.04
PSMB4-201ENST00000290541 KRTDAPP60985 99 aa8.53□□□□□ -1.04
PSMB4-201ENST00000290541 SDIM1Q6ZPB5 146 aa8.53□□□□□ -1.04
PSMB4-201ENST00000290541 KRTAP4-6Q9BYQ5 205 aa8.53□□□□□ -1.04
PSMB4-201ENST00000290541 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.05
PSMB4-201ENST00000290541 IGLV5-39A0A0G2JS06 123 aa8.52□□□□□ -1.05
PSMB4-201ENST00000290541 TMEM223A0PJW6 202 aa8.52□□□□□ -1.05
PSMB4-201ENST00000290541 Q8IZM0 81 aa8.52□□□□□ -1.05
PSMB4-201ENST00000290541 COX7B2Q8TF08 81 aa8.52□□□□□ -1.05
PSMB4-201ENST00000290541 C6orf48Q9UBA6 75 aa8.52□□□□□ -1.05
PSMB4-201ENST00000290541 PANO1I0J062 215 aa8.51□□□□□ -1.05
PSMB4-201ENST00000290541 DPM2O94777 84 aa8.51□□□□□ -1.05
PSMB4-201ENST00000290541 C6orf226Q5I0X4 101 aa8.51□□□□□ -1.05
PSMB4-201ENST00000290541 LINC01545Q5VT33 79 aa8.51□□□□□ -1.05
PSMB4-201ENST00000290541 PET117Q6UWS5 81 aa8.51□□□□□ -1.05
PSMB4-201ENST00000290541 NDUFA1O15239 70 aa8.5□□□□□ -1.05
PSMB4-201ENST00000290541 IGKCP01834 107 aa8.5□□□□□ -1.05
PSMB4-201ENST00000290541 PRSS2P07478 247 aa8.5□□□□□ -1.05
PSMB4-201ENST00000290541 CHTF8P0CG12 524 aa8.5□□□□□ -1.05
PSMB4-201ENST00000290541 S100A2P29034 98 aa8.5□□□□□ -1.05
PSMB4-201ENST00000290541 TMA7Q9Y2S6 64 aaKnown RBP8.5□□□□□ -1.05
PSMB4-201ENST00000290541 C9orf116Q5BN46 136 aaPredicted RBP8.49□□□□□ -1.05
PSMB4-201ENST00000290541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.49□□□□□ -1.05
PSMB4-201ENST00000290541 F8WDY8 70 aa8.48□□□□□ -1.05
PSMB4-201ENST00000290541 PLNP26678 52 aa8.48□□□□□ -1.05
PSMB4-201ENST00000290541 Q6ZSA8 131 aa8.48□□□□□ -1.05
PSMB4-201ENST00000290541 A0A096LNI7 61 aa8.47□□□□□ -1.05
PSMB4-201ENST00000290541 CKS1BP61024 79 aa8.47□□□□□ -1.05
PSMB4-201ENST00000290541 RNF151Q2KHN1 245 aa8.47□□□□□ -1.05
PSMB4-201ENST00000290541 PLA2G1BP04054 148 aaKnown RBP8.46□□□□□ -1.06
PSMB4-201ENST00000290541 TSPEAR-AS2P59090 65 aa8.46□□□□□ -1.06
PSMB4-201ENST00000290541 IGKV2-24A0A0C4DH68 120 aa8.45□□□□□ -1.06
PSMB4-201ENST00000290541 TRBV30A0A0K0K1B3 111 aa8.45□□□□□ -1.06
PSMB4-201ENST00000290541 ATOH7Q8N100 152 aa8.45□□□□□ -1.06
PSMB4-201ENST00000290541 STPG4Q8N801 248 aa8.45□□□□□ -1.06
PSMB4-201ENST00000290541 LOC107984640A0A0U1RRK4 108 aa8.44□□□□□ -1.06
PSMB4-201ENST00000290541 CXCL5P42830 114 aa8.44□□□□□ -1.06
PSMB4-201ENST00000290541 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
PSMB4-201ENST00000290541 GAGE2BQ13066 116 aa8.44□□□□□ -1.06
PSMB4-201ENST00000290541 Q6ZRP5 223 aa8.44□□□□□ -1.06
PSMB4-201ENST00000290541 ZNF625Q96I27 306 aaPredicted RBP8.44□□□□□ -1.06
PSMB4-201ENST00000290541 LEPROTO15243 131 aa8.43□□□□□ -1.06
PSMB4-201ENST00000290541 PTTG1IPP53801 180 aa8.43□□□□□ -1.06
PSMB4-201ENST00000290541 CIRBPQ14011 172 aaKnown RBP8.43□□□□□ -1.06
PSMB4-201ENST00000290541 SCXQ7RTU7 201 aa8.43□□□□□ -1.06
PSMB4-201ENST00000290541 SPACA4Q8TDM5 124 aa8.43□□□□□ -1.06
PSMB4-201ENST00000290541 C20orf202A1L168 122 aa8.42□□□□□ -1.06
PSMB4-201ENST00000290541 TLX1NBP0CAT3 122 aa8.42□□□□□ -1.06
PSMB4-201ENST00000290541 MAJINQ3KP22 176 aa8.42□□□□□ -1.06
PSMB4-201ENST00000290541 CIRBP-AS1Q8TBR5 109 aa8.42□□□□□ -1.06
PSMB4-201ENST00000290541 HERVK_113P61574 105 aa8.41□□□□□ -1.06
PSMB4-201ENST00000290541 GAGE2EQ4V326 116 aa8.41□□□□□ -1.06
PSMB4-201ENST00000290541 GAGE2DQ9UEU5 116 aa8.41□□□□□ -1.06
PSMB4-201ENST00000290541 A0A087WYN8 130 aa8.4□□□□□ -1.06
PSMB4-201ENST00000290541 IGKV2D-26A0A0A0MRZ7 120 aa8.4□□□□□ -1.06
PSMB4-201ENST00000290541 E9PLD3 99 aa8.4□□□□□ -1.06
PSMB4-201ENST00000290541 J3QQQ9 107 aa8.4□□□□□ -1.06
PSMB4-201ENST00000290541 ANKRD39Q53RE8 183 aa8.4□□□□□ -1.06
PSMB4-201ENST00000290541 PLEKHB2Q96CS7 222 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms