RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 Q8N6K4 173 aa9.59□□□□□ -0.87
SMARCA5-201ENST00000283131 A0A087WVE0 104 aa9.59□□□□□ -0.87
SMARCA5-201ENST00000283131 LRRK2Q5S007 2527 aa9.59□□□□□ -0.87
SMARCA5-201ENST00000283131 ZFYVE26Q68DK2 2539 aa9.59□□□□□ -0.87
SMARCA5-201ENST00000283131 CRIP1P50238 77 aa9.59□□□□□ -0.87
SMARCA5-201ENST00000283131 OXLD1Q5BKU9 147 aa9.58□□□□□ -0.88
SMARCA5-201ENST00000283131 TP53AIP1Q9HCN2 124 aa9.58□□□□□ -0.88
SMARCA5-201ENST00000283131 FN1P02751 2386 aaKnown RBP9.58□□□□□ -0.88
SMARCA5-201ENST00000283131 COX6A2Q02221 97 aa9.58□□□□□ -0.88
SMARCA5-201ENST00000283131 LRP4O75096 1905 aa9.58□□□□□ -0.88
SMARCA5-201ENST00000283131 SPACA4Q8TDM5 124 aa9.58□□□□□ -0.88
SMARCA5-201ENST00000283131 LINC01006Q8NI28 216 aa9.57□□□□□ -0.88
SMARCA5-201ENST00000283131 LTBP1Q14766 1721 aa9.57□□□□□ -0.88
SMARCA5-201ENST00000283131 C6orf48Q9UBA6 75 aa9.56□□□□□ -0.88
SMARCA5-201ENST00000283131 Q9UF83 564 aa9.56□□□□□ -0.88
SMARCA5-201ENST00000283131 A0A087WYN8 130 aa9.56□□□□□ -0.88
SMARCA5-201ENST00000283131 PRR3P79522 188 aaKnown RBP9.56□□□□□ -0.88
SMARCA5-201ENST00000283131 SSBP3-AS1Q7Z2R9 100 aa9.56□□□□□ -0.88
SMARCA5-201ENST00000283131 FSTL3O95633 263 aa9.55□□□□□ -0.88
SMARCA5-201ENST00000283131 COL4A1P02462 1669 aa9.55□□□□□ -0.88
SMARCA5-201ENST00000283131 Q8N2B8 174 aa9.55□□□□□ -0.88
SMARCA5-201ENST00000283131 PRORYQ9H606 182 aa9.55□□□□□ -0.88
SMARCA5-201ENST00000283131 C10orf99Q6UWK7 81 aa9.54□□□□□ -0.88
SMARCA5-201ENST00000283131 IGLV8-61A0A075B6I0 122 aa9.54□□□□□ -0.88
SMARCA5-201ENST00000283131 KLLNB2CW77 178 aa9.53□□□□□ -0.88
SMARCA5-201ENST00000283131 POLR2KP53803 58 aaKnown RBP9.53□□□□□ -0.88
SMARCA5-201ENST00000283131 PRM2P04554 102 aa9.52□□□□□ -0.88
SMARCA5-201ENST00000283131 C2orf91Q6ZV80 131 aa9.52□□□□□ -0.88
SMARCA5-201ENST00000283131 LINC00574Q9H8X3 128 aa9.52□□□□□ -0.89
SMARCA5-201ENST00000283131 PTPRBP23467 1997 aa9.52□□□□□ -0.89
SMARCA5-201ENST00000283131 THSD7BQ9C0I4 1608 aa9.52□□□□□ -0.89
SMARCA5-201ENST00000283131 PRO0628Q9UI54 55 aa9.51□□□□□ -0.89
SMARCA5-201ENST00000283131 EIF4EBP1Q13541 118 aaPredicted RBP9.51□□□□□ -0.89
SMARCA5-201ENST00000283131 C19orf84I3L1E1 186 aa9.51□□□□□ -0.89
SMARCA5-201ENST00000283131 LINC00242Q5T6M2 205 aa9.51□□□□□ -0.89
SMARCA5-201ENST00000283131 FAM229AH3BQW9 127 aa9.5□□□□□ -0.89
SMARCA5-201ENST00000283131 CRIPTQ9P021 101 aa9.5□□□□□ -0.89
SMARCA5-201ENST00000283131 C18orf65Q6ZTR6 163 aa9.5□□□□□ -0.89
SMARCA5-201ENST00000283131 Q8NA96 180 aa9.5□□□□□ -0.89
SMARCA5-201ENST00000283131 SMIM1B2RUZ4 78 aa9.49□□□□□ -0.89
SMARCA5-201ENST00000283131 BRI3O95415 125 aa9.48□□□□□ -0.89
SMARCA5-201ENST00000283131 MOBPQ13875 183 aa9.48□□□□□ -0.89
SMARCA5-201ENST00000283131 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
SMARCA5-201ENST00000283131 LINC00313P59037 77 aa9.47□□□□□ -0.89
SMARCA5-201ENST00000283131 EDN2P20800 178 aa9.47□□□□□ -0.89
SMARCA5-201ENST00000283131 PLA2G5P39877 138 aa9.47□□□□□ -0.89
SMARCA5-201ENST00000283131 TLN2Q9Y4G6 2542 aa9.46□□□□□ -0.89
SMARCA5-201ENST00000283131 SMIM29Q86T20 159 aa9.46□□□□□ -0.9
SMARCA5-201ENST00000283131 C11orf1Q9H5F2 150 aa9.45□□□□□ -0.9
SMARCA5-201ENST00000283131 IGIPA6NJ69 53 aa9.45□□□□□ -0.9
SMARCA5-201ENST00000283131 PRR9Q5T870 116 aa9.45□□□□□ -0.9
SMARCA5-201ENST00000283131 COX6B2Q6YFQ2 88 aa9.44□□□□□ -0.9
SMARCA5-201ENST00000283131 FHL2Q14192 279 aa9.44□□□□□ -0.9
SMARCA5-201ENST00000283131 ZNF462Q96JM2 2506 aa9.44□□□□□ -0.9
SMARCA5-201ENST00000283131 IGLV4-60A0A075B6I1 120 aa9.44□□□□□ -0.9
SMARCA5-201ENST00000283131 NHLRC4P0CG21 123 aaPredicted RBP9.44□□□□□ -0.9
SMARCA5-201ENST00000283131 ADAMTS20P59510 1910 aa9.42□□□□□ -0.9
SMARCA5-201ENST00000283131 TLN1Q9Y490 2541 aaKnown RBP9.41□□□□□ -0.9
SMARCA5-201ENST00000283131 TYMSOSQ8TAI1 123 aa9.41□□□□□ -0.9
SMARCA5-201ENST00000283131 C22orf24Q9Y442 160 aa9.41□□□□□ -0.9
SMARCA5-201ENST00000283131 TRAV22A0A0B4J277 110 aa9.41□□□□□ -0.9
SMARCA5-201ENST00000283131 A8MTW9 85 aa9.41□□□□□ -0.9
SMARCA5-201ENST00000283131 APLNQ9ULZ1 77 aa9.4□□□□□ -0.9
SMARCA5-201ENST00000283131 IGLV1-40P01703 118 aa9.4□□□□□ -0.91
SMARCA5-201ENST00000283131 A0A1B0GUV1 79 aa9.39□□□□□ -0.91
SMARCA5-201ENST00000283131 LINC00846Q9NV44 126 aa9.39□□□□□ -0.91
SMARCA5-201ENST00000283131 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
SMARCA5-201ENST00000283131 H3BPC8 53 aa9.39□□□□□ -0.91
SMARCA5-201ENST00000283131 C11orf21Q9P2W6 132 aa9.39□□□□□ -0.91
SMARCA5-201ENST00000283131 J3QL48 77 aa9.38□□□□□ -0.91
SMARCA5-201ENST00000283131 LINC01561Q8N1V8 128 aa9.38□□□□□ -0.91
SMARCA5-201ENST00000283131 Q6ZRU5 148 aa9.38□□□□□ -0.91
SMARCA5-201ENST00000283131 C11orf71Q6IPW1 123 aa9.38□□□□□ -0.91
SMARCA5-201ENST00000283131 LYPD5Q6UWN5 251 aa9.37□□□□□ -0.91
SMARCA5-201ENST00000283131 CNFNQ9BYD5 112 aa9.37□□□□□ -0.91
SMARCA5-201ENST00000283131 NAV2Q8IVL1 2488 aa9.37□□□□□ -0.91
SMARCA5-201ENST00000283131 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
SMARCA5-201ENST00000283131 ADAMTSL4-AS1Q5T5F5 129 aa9.36□□□□□ -0.91
SMARCA5-201ENST00000283131 Q96NJ1 140 aa9.35□□□□□ -0.91
SMARCA5-201ENST00000283131 LUZP6Q538Z0 58 aa9.35□□□□□ -0.91
SMARCA5-201ENST00000283131 GAS8-AS1O95177 125 aa9.35□□□□□ -0.91
SMARCA5-201ENST00000283131 IGLV1-51P01701 117 aa9.35□□□□□ -0.91
SMARCA5-201ENST00000283131 BRWD1-AS2P59051 145 aa9.35□□□□□ -0.91
SMARCA5-201ENST00000283131 ODF3L2Q3SX64 289 aa9.35□□□□□ -0.91
SMARCA5-201ENST00000283131 FLG2Q5D862 2391 aaPredicted RBP9.35□□□□□ -0.91
SMARCA5-201ENST00000283131 C1orf229Q6ZS94 237 aaPredicted RBP9.34□□□□□ -0.91
SMARCA5-201ENST00000283131 COL5A1P20908 1838 aaPredicted RBP9.33□□□□□ -0.92
SMARCA5-201ENST00000283131 LINC01554Q52M75 96 aa9.32□□□□□ -0.92
SMARCA5-201ENST00000283131 AMELXQ99217 191 aa9.32□□□□□ -0.92
SMARCA5-201ENST00000283131 A0A1B0GW54 56 aa9.31□□□□□ -0.92
SMARCA5-201ENST00000283131 UQCR11O14957 56 aa9.31□□□□□ -0.92
SMARCA5-201ENST00000283131 SPATA3Q8NHX4 192 aa9.31□□□□□ -0.92
SMARCA5-201ENST00000283131 EPM2AB3EWF7 344 aa9.3□□□□□ -0.92
SMARCA5-201ENST00000283131 SMR3AQ99954 134 aa9.3□□□□□ -0.92
SMARCA5-201ENST00000283131 CPAMD8Q8IZJ3 1885 aa9.3□□□□□ -0.92
SMARCA5-201ENST00000283131 A0A1W2PNU3 283 aaPredicted RBP9.3□□□□□ -0.92
SMARCA5-201ENST00000283131 WISP2O76076 250 aa9.3□□□□□ -0.92
SMARCA5-201ENST00000283131 C16orf90A8MZG2 172 aa9.3□□□□□ -0.92
SMARCA5-201ENST00000283131 TSPEAR-AS2P59090 65 aa9.3□□□□□ -0.92
SMARCA5-201ENST00000283131 JMJD1CQ15652 2540 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms