RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CKS1BP61024 79 aa17.41■□□□□ 0.38
ROM1-201ENST00000278833 Q6Q795 121 aa17.41■□□□□ 0.38
ROM1-201ENST00000278833 SPATA3Q8NHX4 192 aa17.41■□□□□ 0.38
ROM1-201ENST00000278833 TRRAPQ9Y4A5 3859 aa17.41■□□□□ 0.38
ROM1-201ENST00000278833 NOTCH3Q9UM47 2321 aa17.41■□□□□ 0.38
ROM1-201ENST00000278833 SND1-IT1Q9HBX3 110 aa17.39■□□□□ 0.37
ROM1-201ENST00000278833 TOMM7Q9P0U1 55 aa17.38■□□□□ 0.37
ROM1-201ENST00000278833 IGKV2-28A0A075B6P5 120 aa17.37■□□□□ 0.37
ROM1-201ENST00000278833 IGKV2D-28P01615 120 aa17.37■□□□□ 0.37
ROM1-201ENST00000278833 SS18Q15532 418 aa17.37■□□□□ 0.37
ROM1-201ENST00000278833 IGKV3OR2-268A0A0C4DH90 116 aa17.36■□□□□ 0.37
ROM1-201ENST00000278833 Q8IZM0 81 aa17.36■□□□□ 0.37
ROM1-201ENST00000278833 LINC00337Q8N6G1 96 aa17.36■□□□□ 0.37
ROM1-201ENST00000278833 SNCGO76070 127 aa17.35■□□□□ 0.37
ROM1-201ENST00000278833 CCL18P55774 89 aa17.35■□□□□ 0.37
ROM1-201ENST00000278833 LINC00158P58513 81 aa17.34■□□□□ 0.37
ROM1-201ENST00000278833 ACYP1P07311 99 aa17.33■□□□□ 0.37
ROM1-201ENST00000278833 C5orf38Q86SI9 138 aa17.33■□□□□ 0.37
ROM1-201ENST00000278833 APOC4P55056 127 aa17.32■□□□□ 0.36
ROM1-201ENST00000278833 VWFP04275 2813 aa17.31■□□□□ 0.36
ROM1-201ENST00000278833 PAX4O43316 350 aa17.31■□□□□ 0.36
ROM1-201ENST00000278833 FAM218AQ96MZ4 157 aa17.31■□□□□ 0.36
ROM1-201ENST00000278833 C15orf53Q8NAA6 179 aa17.29■□□□□ 0.36
ROM1-201ENST00000278833 H0YGX0 51 aa17.29■□□□□ 0.36
ROM1-201ENST00000278833 GAGE2BQ13066 116 aa17.29■□□□□ 0.36
ROM1-201ENST00000278833 GAGE2EQ4V326 116 aa17.29■□□□□ 0.36
ROM1-201ENST00000278833 GAGE2DQ9UEU5 116 aa17.29■□□□□ 0.36
ROM1-201ENST00000278833 C22orf24Q9Y442 160 aa17.27■□□□□ 0.36
ROM1-201ENST00000278833 BAALC-AS2P0C853 105 aa17.27■□□□□ 0.35
ROM1-201ENST00000278833 CXCL5P42830 114 aa17.27■□□□□ 0.35
ROM1-201ENST00000278833 C6orf226Q5I0X4 101 aa17.27■□□□□ 0.35
ROM1-201ENST00000278833 SMIM11BQ8TCY0 68 aa17.26■□□□□ 0.35
ROM1-201ENST00000278833 CD164L2Q6UWJ8 174 aa17.25■□□□□ 0.35
ROM1-201ENST00000278833 XCL1P47992 114 aa17.24■□□□□ 0.35
ROM1-201ENST00000278833 PKD1L1Q8TDX9 2849 aa17.24■□□□□ 0.35
ROM1-201ENST00000278833 MIFP14174 115 aa17.24■□□□□ 0.35
ROM1-201ENST00000278833 IGHV4-28A0A0C4DH34 117 aa17.22■□□□□ 0.35
ROM1-201ENST00000278833 WIPF1O43516 503 aa17.22■□□□□ 0.35
ROM1-201ENST00000278833 INAFM2P0DMQ5 153 aa17.22■□□□□ 0.35
ROM1-201ENST00000278833 COX17Q14061 63 aa17.22■□□□□ 0.35
ROM1-201ENST00000278833 Q8NAQ8 132 aa17.22■□□□□ 0.35
ROM1-201ENST00000278833 TRBV7-7A0A0K0K1E9 115 aa17.21■□□□□ 0.35
ROM1-201ENST00000278833 PFN2P35080 140 aa17.21■□□□□ 0.35
ROM1-201ENST00000278833 DEFB135Q30KP9 77 aa17.21■□□□□ 0.35
ROM1-201ENST00000278833 SDIM1Q6ZPB5 146 aa17.21■□□□□ 0.35
ROM1-201ENST00000278833 KIAA0087Q14695 138 aa17.2■□□□□ 0.34
ROM1-201ENST00000278833 MALP21145 153 aa17.2■□□□□ 0.34
ROM1-201ENST00000278833 DAD1P61803 113 aa17.2■□□□□ 0.34
ROM1-201ENST00000278833 SVIPQ8NHG7 77 aa17.2■□□□□ 0.34
ROM1-201ENST00000278833 NDUFC2O95298 119 aa17.19■□□□□ 0.34
ROM1-201ENST00000278833 ATP5G1P05496 136 aa17.19■□□□□ 0.34
ROM1-201ENST00000278833 ANAPC13Q9BS18 74 aa17.18■□□□□ 0.34
ROM1-201ENST00000278833 CMYA5Q8N3K9 4069 aa17.16■□□□□ 0.34
ROM1-201ENST00000278833 NDUFV3P56181 108 aaKnown RBP17.16■□□□□ 0.34
ROM1-201ENST00000278833 MUC7Q8TAX7 377 aa17.16■□□□□ 0.34
ROM1-201ENST00000278833 LINC00269Q8N2A0 174 aa17.16■□□□□ 0.34
ROM1-201ENST00000278833 WFDC9Q8NEX5 89 aa17.16■□□□□ 0.34
ROM1-201ENST00000278833 CHCHD10Q8WYQ3 142 aaPredicted RBP17.16■□□□□ 0.34
ROM1-201ENST00000278833 DNAL4O96015 105 aa17.15■□□□□ 0.34
ROM1-201ENST00000278833 REG3AQ06141 175 aa17.15■□□□□ 0.34
ROM1-201ENST00000278833 IMUPQ9GZP8 106 aa17.15■□□□□ 0.34
ROM1-201ENST00000278833 A0A096LPF7 62 aa17.14■□□□□ 0.33
ROM1-201ENST00000278833 TTC32Q5I0X7 151 aa17.14■□□□□ 0.33
ROM1-201ENST00000278833 A0A087WYN8 130 aa17.14■□□□□ 0.33
ROM1-201ENST00000278833 A0A1B0GX51 115 aa17.14■□□□□ 0.33
ROM1-201ENST00000278833 CLPSL2Q6UWE3 100 aa17.14■□□□□ 0.33
ROM1-201ENST00000278833 OBSCN-AS1Q96MR7 158 aa17.14■□□□□ 0.33
ROM1-201ENST00000278833 MGAM2Q2M2H8 2515 aa17.13■□□□□ 0.33
ROM1-201ENST00000278833 NHLRC4P0CG21 123 aaPredicted RBP17.13■□□□□ 0.33
ROM1-201ENST00000278833 LELP1Q5T871 98 aa17.13■□□□□ 0.33
ROM1-201ENST00000278833 CFAP161Q6P656 301 aa17.13■□□□□ 0.33
ROM1-201ENST00000278833 SPART-AS1P0CW21 52 aa17.12■□□□□ 0.33
ROM1-201ENST00000278833 CELA1Q9UNI1 258 aa17.12■□□□□ 0.33
ROM1-201ENST00000278833 Q9HAA7 133 aa17.12■□□□□ 0.33
ROM1-201ENST00000278833 LINC00167Q96N53 147 aa17.11■□□□□ 0.33
ROM1-201ENST00000278833 C11orf68Q9H3H3 251 aaKnown RBP17.11■□□□□ 0.33
ROM1-201ENST00000278833 ANGP03950 147 aaKnown RBP17.1■□□□□ 0.33
ROM1-201ENST00000278833 LINC00643Q86TS7 51 aa17.1■□□□□ 0.33
ROM1-201ENST00000278833 KLK5Q9Y337 293 aaPredicted RBP17.09■□□□□ 0.33
ROM1-201ENST00000278833 DEFB4AO15263 64 aa17.08■□□□□ 0.33
ROM1-201ENST00000278833 OR13C6PQ8NH95 151 aa17.07■□□□□ 0.32
ROM1-201ENST00000278833 PRR34Q9NV39 138 aa17.07■□□□□ 0.32
ROM1-201ENST00000278833 NANOS2P60321 138 aaKnown RBP17.06■□□□□ 0.32
ROM1-201ENST00000278833 LECT2O14960 151 aa17.05■□□□□ 0.32
ROM1-201ENST00000278833 SMCR5Q8TEV8 140 aa17.05■□□□□ 0.32
ROM1-201ENST00000278833 TMEM126AQ9H061 195 aa17.03■□□□□ 0.32
ROM1-201ENST00000278833 IGHV4-30-4P0DP06 118 aa17.03■□□□□ 0.32
ROM1-201ENST00000278833 Q8N3U1 123 aa17.03■□□□□ 0.32
ROM1-201ENST00000278833 A0A0J9YWU9 116 aa17.01■□□□□ 0.31
ROM1-201ENST00000278833 ORMDL1Q9P0S3 153 aa17■□□□□ 0.31
ROM1-201ENST00000278833 NBEAL1Q6ZS30 2694 aa16.99■□□□□ 0.31
ROM1-201ENST00000278833 IGLV10-54A0A075B6I4 117 aa16.99■□□□□ 0.31
ROM1-201ENST00000278833 NOTCH1P46531 2555 aa16.98■□□□□ 0.31
ROM1-201ENST00000278833 GVQW2A0A096LPI5 108 aaPredicted RBP16.98■□□□□ 0.31
ROM1-201ENST00000278833 H3BNG1 76 aa16.98■□□□□ 0.31
ROM1-201ENST00000278833 SPAG11BQ08648 103 aa16.97■□□□□ 0.31
ROM1-201ENST00000278833 GAGE2AQ6NT46 116 aa16.96■□□□□ 0.31
ROM1-201ENST00000278833 OXLD1Q5BKU9 147 aa16.94■□□□□ 0.3
ROM1-201ENST00000278833 C9orf129Q5T035 196 aaKnown RBP16.94■□□□□ 0.3
ROM1-201ENST00000278833 Q8N814 137 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms