RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 SPINT4Q6UDR6 99 aa8.87□□□□□ -0.99
SRRM4-201ENST00000267260 LINC00575Q6W349 94 aa8.86□□□□□ -0.99
SRRM4-201ENST00000267260 BBC3Q96PG8 261 aaPredicted RBP8.86□□□□□ -0.99
SRRM4-201ENST00000267260 KLLNB2CW77 178 aa8.85□□□□□ -0.99
SRRM4-201ENST00000267260 RNASE3P12724 160 aaKnown RBP8.85□□□□□ -0.99
SRRM4-201ENST00000267260 USP9YO00507 2555 aaPredicted RBP8.85□□□□□ -0.99
SRRM4-201ENST00000267260 CDC42SE2Q9NRR3 84 aa8.85□□□□□ -0.99
SRRM4-201ENST00000267260 IGLV2-11P01706 119 aa8.84□□□□□ -0.99
SRRM4-201ENST00000267260 PSMG3-AS1Q96PY0 264 aa8.84□□□□□ -0.99
SRRM4-201ENST00000267260 LMO4P61968 165 aa8.84□□□□□ -0.99
SRRM4-201ENST00000267260 A0A087WYN8 130 aa8.84□□□□□ -1
SRRM4-201ENST00000267260 EGFEM1PQ0D2K5 195 aa8.83□□□□□ -1
SRRM4-201ENST00000267260 CHCHD7Q9BUK0 85 aa8.83□□□□□ -1
SRRM4-201ENST00000267260 RPS28P62857 69 aaKnown RBP8.83□□□□□ -1
SRRM4-201ENST00000267260 COL4A3Q01955 1670 aa8.83□□□□□ -1
SRRM4-201ENST00000267260 POLR2KP53803 58 aaKnown RBP8.83□□□□□ -1
SRRM4-201ENST00000267260 PROK1P58294 105 aa8.83□□□□□ -1
SRRM4-201ENST00000267260 CYSRT1A8MQ03 144 aa8.82□□□□□ -1
SRRM4-201ENST00000267260 MUC22E2RYF6 1773 aaPredicted RBP8.82□□□□□ -1
SRRM4-201ENST00000267260 C1orf64Q8NEQ6 169 aa8.82□□□□□ -1
SRRM4-201ENST00000267260 C7orf65Q6ZTY9 151 aa8.82□□□□□ -1
SRRM4-201ENST00000267260 PLA2G1BP04054 148 aaKnown RBP8.81□□□□□ -1
SRRM4-201ENST00000267260 ACYP2P14621 99 aa8.81□□□□□ -1
SRRM4-201ENST00000267260 NUPR2A6NF83 97 aa8.81□□□□□ -1
SRRM4-201ENST00000267260 USP24Q9UPU5 2620 aa8.8□□□□□ -1
SRRM4-201ENST00000267260 PRLHP81277 87 aa8.8□□□□□ -1
SRRM4-201ENST00000267260 RETNLBQ9BQ08 111 aa8.8□□□□□ -1
SRRM4-201ENST00000267260 ZNF702PQ9H963 129 aa8.8□□□□□ -1
SRRM4-201ENST00000267260 IGIPA6NJ69 53 aa8.79□□□□□ -1
SRRM4-201ENST00000267260 SBSPONQ8IVN8 264 aa8.79□□□□□ -1
SRRM4-201ENST00000267260 TP53AIP1Q9HCN2 124 aa8.79□□□□□ -1
SRRM4-201ENST00000267260 Q9BRP9 147 aa8.79□□□□□ -1
SRRM4-201ENST00000267260 IGLV2-18A0A075B6J9 118 aa8.79□□□□□ -1
SRRM4-201ENST00000267260 CRIP2P52943 208 aaPredicted RBP8.78□□□□□ -1
SRRM4-201ENST00000267260 C4orf26Q17RF5 130 aa8.77□□□□□ -1
SRRM4-201ENST00000267260 Q6ZTC4 211 aa8.77□□□□□ -1.01
SRRM4-201ENST00000267260 ZNF295-AS1Q8N0V1 137 aa8.77□□□□□ -1.01
SRRM4-201ENST00000267260 LINC01561Q8N1V8 128 aa8.77□□□□□ -1.01
SRRM4-201ENST00000267260 LINC00482Q8N8I6 264 aa8.75□□□□□ -1.01
SRRM4-201ENST00000267260 LY6G6CO95867 125 aa8.75□□□□□ -1.01
SRRM4-201ENST00000267260 ATP11AUNQ6ZP68 121 aa8.75□□□□□ -1.01
SRRM4-201ENST00000267260 BRWD1-AS2P59051 145 aa8.75□□□□□ -1.01
SRRM4-201ENST00000267260 Q6ZSV7 163 aa8.75□□□□□ -1.01
SRRM4-201ENST00000267260 M0R2N4 97 aa8.74□□□□□ -1.01
SRRM4-201ENST00000267260 IGLV5-52A0A0A0MRZ9 124 aa8.74□□□□□ -1.01
SRRM4-201ENST00000267260 BCE1O60756 84 aa8.74□□□□□ -1.01
SRRM4-201ENST00000267260 SMIM1B2RUZ4 78 aa8.74□□□□□ -1.01
SRRM4-201ENST00000267260 A0A087WSZ3 146 aa8.73□□□□□ -1.01
SRRM4-201ENST00000267260 PRM2P04554 102 aa8.73□□□□□ -1.01
SRRM4-201ENST00000267260 MSMPQ1L6U9 139 aa8.73□□□□□ -1.01
SRRM4-201ENST00000267260 Q8NA96 180 aa8.73□□□□□ -1.01
SRRM4-201ENST00000267260 INAFM1C9JVW0 142 aa8.73□□□□□ -1.01
SRRM4-201ENST00000267260 LINC00242Q5T6M2 205 aa8.73□□□□□ -1.01
SRRM4-201ENST00000267260 LINC00846Q9NV44 126 aa8.73□□□□□ -1.01
SRRM4-201ENST00000267260 C6orf48Q9UBA6 75 aa8.72□□□□□ -1.01
SRRM4-201ENST00000267260 FSHBP01225 129 aa8.72□□□□□ -1.01
SRRM4-201ENST00000267260 CHD8Q9HCK8 2581 aa8.72□□□□□ -1.01
SRRM4-201ENST00000267260 A0A1B0GW54 56 aa8.72□□□□□ -1.01
SRRM4-201ENST00000267260 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.01
SRRM4-201ENST00000267260 A0A1B0GUV1 79 aa8.71□□□□□ -1.02
SRRM4-201ENST00000267260 C2orf48Q96LS8 159 aa8.71□□□□□ -1.02
SRRM4-201ENST00000267260 IGKV2D-30A0A075B6S6 120 aa8.71□□□□□ -1.02
SRRM4-201ENST00000267260 IGKV2-30P06310 120 aa8.71□□□□□ -1.02
SRRM4-201ENST00000267260 IGLV1-40P01703 118 aa8.7□□□□□ -1.02
SRRM4-201ENST00000267260 Q9UF83 564 aa8.7□□□□□ -1.02
SRRM4-201ENST00000267260 PRR9Q5T870 116 aa8.7□□□□□ -1.02
SRRM4-201ENST00000267260 C11orf71Q6IPW1 123 aa8.7□□□□□ -1.02
SRRM4-201ENST00000267260 COX6A2Q02221 97 aa8.7□□□□□ -1.02
SRRM4-201ENST00000267260 C6orf223Q8N319 242 aa8.7□□□□□ -1.02
SRRM4-201ENST00000267260 H3BPC8 53 aa8.69□□□□□ -1.02
SRRM4-201ENST00000267260 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
SRRM4-201ENST00000267260 SMIM29Q86T20 159 aa8.69□□□□□ -1.02
SRRM4-201ENST00000267260 DEFB116Q30KQ4 102 aa8.69□□□□□ -1.02
SRRM4-201ENST00000267260 PRR3P79522 188 aaKnown RBP8.69□□□□□ -1.02
SRRM4-201ENST00000267260 AMELXQ99217 191 aa8.69□□□□□ -1.02
SRRM4-201ENST00000267260 LINC01556Q5JQF7 62 aa8.68□□□□□ -1.02
SRRM4-201ENST00000267260 ADAMTSL4-AS1Q5T5F5 129 aa8.68□□□□□ -1.02
SRRM4-201ENST00000267260 CDIP1Q9H305 208 aa8.68□□□□□ -1.02
SRRM4-201ENST00000267260 Q6ZPA2 131 aa8.67□□□□□ -1.02
SRRM4-201ENST00000267260 C1orf229Q6ZS94 237 aaPredicted RBP8.67□□□□□ -1.02
SRRM4-201ENST00000267260 Q8N2B8 174 aa8.67□□□□□ -1.02
SRRM4-201ENST00000267260 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
SRRM4-201ENST00000267260 TSPEAR-AS2P59090 65 aa8.65□□□□□ -1.02
SRRM4-201ENST00000267260 GAS8-AS1O95177 125 aa8.65□□□□□ -1.02
SRRM4-201ENST00000267260 FASNP49327 2511 aaKnown RBP8.65□□□□□ -1.03
SRRM4-201ENST00000267260 C11orf21Q9P2W6 132 aa8.65□□□□□ -1.03
SRRM4-201ENST00000267260 LINC01006Q8NI28 216 aa8.64□□□□□ -1.03
SRRM4-201ENST00000267260 PLA2G5P39877 138 aa8.64□□□□□ -1.03
SRRM4-201ENST00000267260 LY6G6DO95868 133 aa8.64□□□□□ -1.03
SRRM4-201ENST00000267260 BPTFQ12830 3046 aa8.63□□□□□ -1.03
SRRM4-201ENST00000267260 PRRC2CQ9Y520 2896 aaKnown RBP8.63□□□□□ -1.03
SRRM4-201ENST00000267260 LINC00337Q8N6G1 96 aa8.62□□□□□ -1.03
SRRM4-201ENST00000267260 CYP4F30PQ9H0H9 118 aa8.62□□□□□ -1.03
SRRM4-201ENST00000267260 COX8CQ7Z4L0 72 aa8.61□□□□□ -1.03
SRRM4-201ENST00000267260 OXLD1Q5BKU9 147 aa8.61□□□□□ -1.03
SRRM4-201ENST00000267260 CD164Q04900 197 aa8.61□□□□□ -1.03
SRRM4-201ENST00000267260 CRIP3Q6Q6R5 217 aa8.6□□□□□ -1.03
SRRM4-201ENST00000267260 C10orf99Q6UWK7 81 aa8.6□□□□□ -1.03
SRRM4-201ENST00000267260 MDFIQ99750 246 aa8.6□□□□□ -1.03
SRRM4-201ENST00000267260 FHL2Q14192 279 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms