RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 MAP1AP78559 2803 aaPredicted RBP8.3□□□□□ -1.08
VPS33A-201ENST00000267199 NDUFC2-KCTD14E9PQ53 114 aa8.29□□□□□ -1.08
VPS33A-201ENST00000267199 FAM19A1Q7Z5A9 133 aa8.29□□□□□ -1.08
VPS33A-201ENST00000267199 ZNF292O60281 2723 aa8.29□□□□□ -1.08
VPS33A-201ENST00000267199 C9orf116Q5BN46 136 aaPredicted RBP8.28□□□□□ -1.08
VPS33A-201ENST00000267199 C1orf158Q8N1D5 194 aa8.28□□□□□ -1.08
VPS33A-201ENST00000267199 Q9UF83 564 aa8.28□□□□□ -1.08
VPS33A-201ENST00000267199 IGLV4-60A0A075B6I1 120 aa8.28□□□□□ -1.08
VPS33A-201ENST00000267199 TRBV7-7A0A0K0K1E9 115 aa8.28□□□□□ -1.08
VPS33A-201ENST00000267199 H3BQ85 93 aa8.28□□□□□ -1.08
VPS33A-201ENST00000267199 HILS1P60008 231 aa8.28□□□□□ -1.08
VPS33A-201ENST00000267199 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
VPS33A-201ENST00000267199 LINC00337Q8N6G1 96 aa8.27□□□□□ -1.09
VPS33A-201ENST00000267199 NBEAQ8NFP9 2946 aa8.27□□□□□ -1.09
VPS33A-201ENST00000267199 NTM-AS1Q6ZSK4 140 aa8.26□□□□□ -1.09
VPS33A-201ENST00000267199 SBSPONQ8IVN8 264 aa8.26□□□□□ -1.09
VPS33A-201ENST00000267199 SPTSSBQ8NFR3 76 aa8.26□□□□□ -1.09
VPS33A-201ENST00000267199 SOSTDC1Q6X4U4 206 aa8.25□□□□□ -1.09
VPS33A-201ENST00000267199 FAM19A4Q96LR4 140 aa8.25□□□□□ -1.09
VPS33A-201ENST00000267199 FREM2Q5SZK8 3169 aa8.24□□□□□ -1.09
VPS33A-201ENST00000267199 LRCOL1A6NCL2 159 aa8.24□□□□□ -1.09
VPS33A-201ENST00000267199 LYRM9A8MSI8 78 aa8.24□□□□□ -1.09
VPS33A-201ENST00000267199 CD164L2Q6UWJ8 174 aa8.24□□□□□ -1.09
VPS33A-201ENST00000267199 F8P00451 2351 aa8.24□□□□□ -1.09
VPS33A-201ENST00000267199 Q8N814 137 aa8.24□□□□□ -1.09
VPS33A-201ENST00000267199 IGKV2-28A0A075B6P5 120 aa8.23□□□□□ -1.09
VPS33A-201ENST00000267199 A0A096LNI7 61 aa8.23□□□□□ -1.09
VPS33A-201ENST00000267199 A8MTW9 85 aa8.23□□□□□ -1.09
VPS33A-201ENST00000267199 IGKV2D-28P01615 120 aa8.23□□□□□ -1.09
VPS33A-201ENST00000267199 FAM19A3Q7Z5A8 133 aa8.23□□□□□ -1.09
VPS33A-201ENST00000267199 CELA1Q9UNI1 258 aa8.23□□□□□ -1.09
VPS33A-201ENST00000267199 RMI2Q96E14 147 aa8.23□□□□□ -1.09
VPS33A-201ENST00000267199 UNQ6190/PRO20217Q6UXQ8 127 aa8.22□□□□□ -1.09
VPS33A-201ENST00000267199 BEAN1Q3B7T3 259 aa8.22□□□□□ -1.09
VPS33A-201ENST00000267199 FAM218AQ96MZ4 157 aa8.22□□□□□ -1.09
VPS33A-201ENST00000267199 KIR2DL5BQ8NHK3 375 aa8.22□□□□□ -1.09
VPS33A-201ENST00000267199 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
VPS33A-201ENST00000267199 FRYQ5TBA9 3013 aa8.21□□□□□ -1.09
VPS33A-201ENST00000267199 SMIM26A0A096LP01 95 aa8.21□□□□□ -1.09
VPS33A-201ENST00000267199 TRAV7A0A075B6U4 112 aa8.21□□□□□ -1.1
VPS33A-201ENST00000267199 Q8N3U1 123 aa8.21□□□□□ -1.1
VPS33A-201ENST00000267199 A0A087WZ39 114 aa8.21□□□□□ -1.1
VPS33A-201ENST00000267199 INAFM1C9JVW0 142 aa8.21□□□□□ -1.1
VPS33A-201ENST00000267199 MIFP14174 115 aa8.21□□□□□ -1.1
VPS33A-201ENST00000267199 Q8IZM0 81 aa8.21□□□□□ -1.1
VPS33A-201ENST00000267199 IGKV2-24A0A0C4DH68 120 aa8.2□□□□□ -1.1
VPS33A-201ENST00000267199 PLA2G2AP14555 144 aa8.2□□□□□ -1.1
VPS33A-201ENST00000267199 NDUFC1O43677 76 aa8.2□□□□□ -1.1
VPS33A-201ENST00000267199 V9GYY9 64 aa8.2□□□□□ -1.1
VPS33A-201ENST00000267199 FLNBO75369 2602 aaKnown RBP8.19□□□□□ -1.1
VPS33A-201ENST00000267199 CYSRT1A8MQ03 144 aa8.19□□□□□ -1.1
VPS33A-201ENST00000267199 NHLRC4P0CG21 123 aaPredicted RBP8.19□□□□□ -1.1
VPS33A-201ENST00000267199 H0Y9J4 135 aa8.19□□□□□ -1.1
VPS33A-201ENST00000267199 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
VPS33A-201ENST00000267199 WFDC10BQ8IUB3 73 aa8.19□□□□□ -1.1
VPS33A-201ENST00000267199 IGLV1-51P01701 117 aa8.18□□□□□ -1.1
VPS33A-201ENST00000267199 SERP1Q9Y6X1 66 aa8.18□□□□□ -1.1
VPS33A-201ENST00000267199 FAM30AQ9NZY2 134 aa8.18□□□□□ -1.1
VPS33A-201ENST00000267199 WFDC13Q8IUB5 93 aa8.18□□□□□ -1.1
VPS33A-201ENST00000267199 IGLV5-39A0A0G2JS06 123 aa8.17□□□□□ -1.1
VPS33A-201ENST00000267199 KLK9Q2XQG4 91 aa8.17□□□□□ -1.1
VPS33A-201ENST00000267199 C11orf72Q8NBR9 251 aa8.17□□□□□ -1.1
VPS33A-201ENST00000267199 NDUFB1O75438 58 aa8.17□□□□□ -1.1
VPS33A-201ENST00000267199 FRYLO94915 3013 aa8.17□□□□□ -1.1
VPS33A-201ENST00000267199 SPEGQ15772 3267 aa8.17□□□□□ -1.1
VPS33A-201ENST00000267199 TRBV10-3A0A0K0K1G6 114 aa8.17□□□□□ -1.1
VPS33A-201ENST00000267199 C1orf195Q5TG92 126 aa8.17□□□□□ -1.1
VPS33A-201ENST00000267199 EIF4EBP3O60516 100 aaPredicted RBP8.16□□□□□ -1.1
VPS33A-201ENST00000267199 USP24Q9UPU5 2620 aa8.16□□□□□ -1.1
VPS33A-201ENST00000267199 A0A0J9YWU9 116 aa8.15□□□□□ -1.1
VPS33A-201ENST00000267199 CRYGAP11844 174 aa8.15□□□□□ -1.1
VPS33A-201ENST00000267199 C4orf26Q17RF5 130 aa8.15□□□□□ -1.1
VPS33A-201ENST00000267199 SMR3AQ99954 134 aa8.15□□□□□ -1.1
VPS33A-201ENST00000267199 HECTD1Q9ULT8 2610 aa8.15□□□□□ -1.1
VPS33A-201ENST00000267199 FHL2Q14192 279 aa8.15□□□□□ -1.1
VPS33A-201ENST00000267199 Q6ZVQ6 151 aa8.14□□□□□ -1.11
VPS33A-201ENST00000267199 LY6G6DO95868 133 aa8.14□□□□□ -1.11
VPS33A-201ENST00000267199 NANOS2P60321 138 aaKnown RBP8.14□□□□□ -1.11
VPS33A-201ENST00000267199 C6orf223Q8N319 242 aa8.14□□□□□ -1.11
VPS33A-201ENST00000267199 LITAFQ99732 161 aa8.14□□□□□ -1.11
VPS33A-201ENST00000267199 AKAP13Q12802 2813 aa8.14□□□□□ -1.11
VPS33A-201ENST00000267199 RPL37AP8A6NKH3 93 aa8.14□□□□□ -1.11
VPS33A-201ENST00000267199 ATP5EP56381 51 aaPredicted RBP8.14□□□□□ -1.11
VPS33A-201ENST00000267199 UBE2AP49459 152 aa8.13□□□□□ -1.11
VPS33A-201ENST00000267199 COX17Q14061 63 aa8.13□□□□□ -1.11
VPS33A-201ENST00000267199 SYCNQ0VAF6 134 aa8.13□□□□□ -1.11
VPS33A-201ENST00000267199 Q8N9L7 120 aa8.13□□□□□ -1.11
VPS33A-201ENST00000267199 SMCR5Q8TEV8 140 aa8.13□□□□□ -1.11
VPS33A-201ENST00000267199 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.13□□□□□ -1.11
VPS33A-201ENST00000267199 C11orf45Q8TAV5 145 aa8.13□□□□□ -1.11
VPS33A-201ENST00000267199 FLNAP21333 2647 aaKnown RBP8.12□□□□□ -1.11
VPS33A-201ENST00000267199 M0R378 163 aa8.12□□□□□ -1.11
VPS33A-201ENST00000267199 LINC01547P58512 204 aaPredicted RBP8.12□□□□□ -1.11
VPS33A-201ENST00000267199 LELP1Q5T871 98 aa8.12□□□□□ -1.11
VPS33A-201ENST00000267199 DEFB131BA0A096LNP1 70 aa8.11□□□□□ -1.11
VPS33A-201ENST00000267199 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.11□□□□□ -1.11
VPS33A-201ENST00000267199 IGHV3OR16-9A0A0B4J2B5 98 aa8.1□□□□□ -1.11
VPS33A-201ENST00000267199 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
VPS33A-201ENST00000267199 KPRPQ5T749 579 aaPredicted RBP8.1□□□□□ -1.11
VPS33A-201ENST00000267199 TMEM254Q8TBM7 123 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms