RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.13□□□□□ -0.79
PDLIM2-201ENST00000265810 LINC00308Q8TCZ7 52 aa10.13□□□□□ -0.79
PDLIM2-201ENST00000265810 TTC32Q5I0X7 151 aa10.13□□□□□ -0.79
PDLIM2-201ENST00000265810 SPANXCQ9NY87 97 aa10.13□□□□□ -0.79
PDLIM2-201ENST00000265810 CELSR2Q9HCU4 2923 aa10.13□□□□□ -0.79
PDLIM2-201ENST00000265810 LINC01546A6NGU7 62 aa10.12□□□□□ -0.79
PDLIM2-201ENST00000265810 SMIM1B2RUZ4 78 aa10.12□□□□□ -0.79
PDLIM2-201ENST00000265810 CARD19Q96LW7 228 aa10.12□□□□□ -0.79
PDLIM2-201ENST00000265810 A0A1B0GUV1 79 aa10.12□□□□□ -0.79
PDLIM2-201ENST00000265810 SPANXB1Q9NS25 103 aaPredicted RBP10.12□□□□□ -0.79
PDLIM2-201ENST00000265810 SYCNQ0VAF6 134 aa10.12□□□□□ -0.79
PDLIM2-201ENST00000265810 NUPR2A6NF83 97 aa10.12□□□□□ -0.79
PDLIM2-201ENST00000265810 F8W1H4 67 aa10.11□□□□□ -0.79
PDLIM2-201ENST00000265810 C14orf177Q52M58 125 aa10.11□□□□□ -0.79
PDLIM2-201ENST00000265810 TSPEAR-AS2P59090 65 aa10.11□□□□□ -0.79
PDLIM2-201ENST00000265810 TMEM126AQ9H061 195 aa10.11□□□□□ -0.79
PDLIM2-201ENST00000265810 HIVEP1P15822 2718 aa10.1□□□□□ -0.79
PDLIM2-201ENST00000265810 LY6G6CO95867 125 aa10.1□□□□□ -0.79
PDLIM2-201ENST00000265810 NOTCH1P46531 2555 aa10.1□□□□□ -0.79
PDLIM2-201ENST00000265810 A0A087WZ39 114 aa10.1□□□□□ -0.79
PDLIM2-201ENST00000265810 NHLRC4P0CG21 123 aaPredicted RBP10.1□□□□□ -0.79
PDLIM2-201ENST00000265810 F8WEM9 126 aa10.09□□□□□ -0.79
PDLIM2-201ENST00000265810 PKIGQ9Y2B9 76 aa10.09□□□□□ -0.79
PDLIM2-201ENST00000265810 ETDCA0A1B0GVM5 59 aa10.09□□□□□ -0.79
PDLIM2-201ENST00000265810 H0YGX0 51 aa10.08□□□□□ -0.8
PDLIM2-201ENST00000265810 DCHS2Q6V1P9 2916 aa10.08□□□□□ -0.8
PDLIM2-201ENST00000265810 CYSRT1A8MQ03 144 aa10.08□□□□□ -0.8
PDLIM2-201ENST00000265810 SCGB1A1P11684 91 aa10.08□□□□□ -0.8
PDLIM2-201ENST00000265810 Q8IZM0 81 aa10.08□□□□□ -0.8
PDLIM2-201ENST00000265810 K7EIL1 84 aa10.07□□□□□ -0.8
PDLIM2-201ENST00000265810 CLEC2BQ92478 149 aa10.07□□□□□ -0.8
PDLIM2-201ENST00000265810 A0A0B4J2C4 111 aa10.07□□□□□ -0.8
PDLIM2-201ENST00000265810 ESRGQ1W209 222 aa10.07□□□□□ -0.8
PDLIM2-201ENST00000265810 MDFIQ99750 246 aa10.07□□□□□ -0.8
PDLIM2-201ENST00000265810 UNQ6190/PRO20217Q6UXQ8 127 aa10.07□□□□□ -0.8
PDLIM2-201ENST00000265810 BAALC-AS2P0C853 105 aa10.06□□□□□ -0.8
PDLIM2-201ENST00000265810 GAGE2AQ6NT46 116 aa10.06□□□□□ -0.8
PDLIM2-201ENST00000265810 ZFHX4Q86UP3 3567 aa10.06□□□□□ -0.8
PDLIM2-201ENST00000265810 TIMM17BO60830 172 aa10.06□□□□□ -0.8
PDLIM2-201ENST00000265810 DEFB105AQ8NG35 78 aa10.06□□□□□ -0.8
PDLIM2-201ENST00000265810 PLAC8L1A1L4L8 177 aa10.05□□□□□ -0.8
PDLIM2-201ENST00000265810 NTN5Q8WTR8 489 aaPredicted RBP10.05□□□□□ -0.8
PDLIM2-201ENST00000265810 LINC01620Q4KN68 170 aa10.04□□□□□ -0.8
PDLIM2-201ENST00000265810 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
PDLIM2-201ENST00000265810 SPANXDQ9BXN6 97 aa10.04□□□□□ -0.8
PDLIM2-201ENST00000265810 PPDPFLQ8WWR9 84 aa10.03□□□□□ -0.8
PDLIM2-201ENST00000265810 ORMDL1Q9P0S3 153 aa10.03□□□□□ -0.8
PDLIM2-201ENST00000265810 INAFM2P0DMQ5 153 aa10.03□□□□□ -0.8
PDLIM2-201ENST00000265810 DIRC1Q969H9 104 aa10.03□□□□□ -0.8
PDLIM2-201ENST00000265810 ZNF575Q86XF7 245 aa10.02□□□□□ -0.8
PDLIM2-201ENST00000265810 Q8N3U1 123 aa10.02□□□□□ -0.81
PDLIM2-201ENST00000265810 EGFEM1PQ0D2K5 195 aa10.01□□□□□ -0.81
PDLIM2-201ENST00000265810 WFDC2Q14508 124 aa10.01□□□□□ -0.81
PDLIM2-201ENST00000265810 ANKRD29Q8N6D5 301 aa10.01□□□□□ -0.81
PDLIM2-201ENST00000265810 H3BNG1 76 aa10□□□□□ -0.81
PDLIM2-201ENST00000265810 C6orf223Q8N319 242 aa10□□□□□ -0.81
PDLIM2-201ENST00000265810 IGHV3OR16-9A0A0B4J2B5 98 aa10□□□□□ -0.81
PDLIM2-201ENST00000265810 TCL1BO95988 128 aa10□□□□□ -0.81
PDLIM2-201ENST00000265810 ADAMTSL4-AS1Q5T5F5 129 aa10□□□□□ -0.81
PDLIM2-201ENST00000265810 FAM19A5Q7Z5A7 132 aaPredicted RBP9.99□□□□□ -0.81
PDLIM2-201ENST00000265810 B9D2Q9BPU9 175 aa9.99□□□□□ -0.81
PDLIM2-201ENST00000265810 USP17L23D6RBM5 183 aa9.98□□□□□ -0.81
PDLIM2-201ENST00000265810 NSD1Q96L73 2696 aaPredicted RBP9.98□□□□□ -0.81
PDLIM2-201ENST00000265810 COX17Q14061 63 aa9.97□□□□□ -0.81
PDLIM2-201ENST00000265810 TRIAP1O43715 76 aa9.97□□□□□ -0.81
PDLIM2-201ENST00000265810 DSCR8Q96T75 97 aa9.97□□□□□ -0.81
PDLIM2-201ENST00000265810 LINC01556Q5JQF7 62 aa9.97□□□□□ -0.81
PDLIM2-201ENST00000265810 UBE2AP49459 152 aa9.96□□□□□ -0.81
PDLIM2-201ENST00000265810 COX7BP24311 80 aa9.96□□□□□ -0.81
PDLIM2-201ENST00000265810 C6orf99Q4VX62 202 aa9.95□□□□□ -0.82
PDLIM2-201ENST00000265810 NBEAL2Q6ZNJ1 2754 aa9.95□□□□□ -0.82
PDLIM2-201ENST00000265810 IGKV2-28A0A075B6P5 120 aa9.94□□□□□ -0.82
PDLIM2-201ENST00000265810 IGKV2D-28P01615 120 aa9.94□□□□□ -0.82
PDLIM2-201ENST00000265810 IGLV5-39A0A0G2JS06 123 aa9.94□□□□□ -0.82
PDLIM2-201ENST00000265810 TRBV10-2A0A0K0K1G8 114 aa9.94□□□□□ -0.82
PDLIM2-201ENST00000265810 LINC00612Q8N6U2 182 aa9.94□□□□□ -0.82
PDLIM2-201ENST00000265810 ASH1LQ9NR48 2969 aaKnown RBP9.93□□□□□ -0.82
PDLIM2-201ENST00000265810 TRBV30A0A0K0K1B3 111 aa9.92□□□□□ -0.82
PDLIM2-201ENST00000265810 LOC107984640A0A0U1RRK4 108 aa9.92□□□□□ -0.82
PDLIM2-201ENST00000265810 PRR3P79522 188 aaKnown RBP9.92□□□□□ -0.82
PDLIM2-201ENST00000265810 HIGD2AQ9BW72 106 aa9.92□□□□□ -0.82
PDLIM2-201ENST00000265810 TEN1Q86WV5 123 aa9.92□□□□□ -0.82
PDLIM2-201ENST00000265810 HIST1H4AP62805 103 aaKnown RBP9.92□□□□□ -0.82
PDLIM2-201ENST00000265810 LINC00588Q9Y4M8 146 aa9.92□□□□□ -0.82
PDLIM2-201ENST00000265810 ANAPC13Q9BS18 74 aa9.91□□□□□ -0.82
PDLIM2-201ENST00000265810 IGLV5-45A0A087WSX0 123 aa9.91□□□□□ -0.82
PDLIM2-201ENST00000265810 SMG1Q96Q15 3661 aaKnown RBP9.9□□□□□ -0.82
PDLIM2-201ENST00000265810 hADV29S1A0JD25 119 aa9.9□□□□□ -0.82
PDLIM2-201ENST00000265810 LINC01561Q8N1V8 128 aa9.9□□□□□ -0.82
PDLIM2-201ENST00000265810 SMIM11BQ8TCY0 68 aa9.9□□□□□ -0.82
PDLIM2-201ENST00000265810 NF1P21359 2839 aa9.9□□□□□ -0.82
PDLIM2-201ENST00000265810 H3BT86 120 aa9.9□□□□□ -0.82
PDLIM2-201ENST00000265810 SLPIP03973 132 aa9.9□□□□□ -0.82
PDLIM2-201ENST00000265810 M0R378 163 aa9.9□□□□□ -0.83
PDLIM2-201ENST00000265810 TRAV23DV6A0A075B6W5 121 aa9.89□□□□□ -0.83
PDLIM2-201ENST00000265810 WIPF1O43516 503 aa9.89□□□□□ -0.83
PDLIM2-201ENST00000265810 Q6ZRU5 148 aa9.89□□□□□ -0.83
PDLIM2-201ENST00000265810 MUC7Q8TAX7 377 aa9.89□□□□□ -0.83
PDLIM2-201ENST00000265810 TM2D3Q9BRN9 247 aa9.89□□□□□ -0.83
PDLIM2-201ENST00000265810 RPL37AP8A6NKH3 93 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms