RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 H0Y9P7 68 aa12.83□□□□□ -0.35
COL5A3-201ENST00000264828 AMELXQ99217 191 aa12.83□□□□□ -0.36
COL5A3-201ENST00000264828 A0A096LNJ9 63 aa12.83□□□□□ -0.36
COL5A3-201ENST00000264828 A0A087WSZ3 146 aa12.82□□□□□ -0.36
COL5A3-201ENST00000264828 LINC01556Q5JQF7 62 aa12.81□□□□□ -0.36
COL5A3-201ENST00000264828 Q6ZTC4 211 aa12.81□□□□□ -0.36
COL5A3-201ENST00000264828 CRYGAP11844 174 aa12.81□□□□□ -0.36
COL5A3-201ENST00000264828 CPAMD8Q8IZJ3 1885 aa12.8□□□□□ -0.36
COL5A3-201ENST00000264828 EML5Q05BV3 1969 aa12.8□□□□□ -0.36
COL5A3-201ENST00000264828 SBSPONQ8IVN8 264 aa12.8□□□□□ -0.36
COL5A3-201ENST00000264828 IGLV5-52A0A0A0MRZ9 124 aa12.79□□□□□ -0.36
COL5A3-201ENST00000264828 SORL1Q92673 2214 aa12.79□□□□□ -0.36
COL5A3-201ENST00000264828 ADAMTS20P59510 1910 aa12.79□□□□□ -0.36
COL5A3-201ENST00000264828 LINC00846Q9NV44 126 aa12.78□□□□□ -0.36
COL5A3-201ENST00000264828 NUPR2A6NF83 97 aa12.77□□□□□ -0.36
COL5A3-201ENST00000264828 IGLV1-51P01701 117 aa12.76□□□□□ -0.37
COL5A3-201ENST00000264828 Q9UF83 564 aa12.76□□□□□ -0.37
COL5A3-201ENST00000264828 MUC6Q6W4X9 2439 aa12.75□□□□□ -0.37
COL5A3-201ENST00000264828 RAI1Q7Z5J4 1906 aaPredicted RBP12.75□□□□□ -0.37
COL5A3-201ENST00000264828 TMEM254Q8TBM7 123 aa12.75□□□□□ -0.37
COL5A3-201ENST00000264828 HCG22E2RYF7 251 aa12.74□□□□□ -0.37
COL5A3-201ENST00000264828 CSDC2Q9Y534 153 aaKnown RBP12.74□□□□□ -0.37
COL5A3-201ENST00000264828 ANKHD1Q8IWZ3 2542 aaKnown RBP12.73□□□□□ -0.37
COL5A3-201ENST00000264828 PRLHP81277 87 aa12.72□□□□□ -0.37
COL5A3-201ENST00000264828 Q6ZRU5 148 aa12.71□□□□□ -0.38
COL5A3-201ENST00000264828 LINC00337Q8N6G1 96 aa12.71□□□□□ -0.38
COL5A3-201ENST00000264828 SPG11Q96JI7 2443 aa12.7□□□□□ -0.38
COL5A3-201ENST00000264828 LYPD5Q6UWN5 251 aa12.69□□□□□ -0.38
COL5A3-201ENST00000264828 CSPG4Q6UVK1 2322 aa12.69□□□□□ -0.38
COL5A3-201ENST00000264828 COX8CQ7Z4L0 72 aa12.68□□□□□ -0.38
COL5A3-201ENST00000264828 A0A1W2PPR1 153 aa12.68□□□□□ -0.38
COL5A3-201ENST00000264828 CDIP1Q9H305 208 aa12.68□□□□□ -0.38
COL5A3-201ENST00000264828 C16orf95Q9H693 158 aa12.68□□□□□ -0.38
COL5A3-201ENST00000264828 OTOGLQ3ZCN5 2332 aa12.67□□□□□ -0.38
COL5A3-201ENST00000264828 SMIM29Q86T20 159 aa12.67□□□□□ -0.38
COL5A3-201ENST00000264828 EXPH5Q8NEV8 1989 aa12.66□□□□□ -0.38
COL5A3-201ENST00000264828 A0A1B0GUV1 79 aa12.65□□□□□ -0.38
COL5A3-201ENST00000264828 C1orf64Q8NEQ6 169 aa12.65□□□□□ -0.38
COL5A3-201ENST00000264828 C2orf48Q96LS8 159 aa12.64□□□□□ -0.39
COL5A3-201ENST00000264828 SMCR5Q8TEV8 140 aa12.62□□□□□ -0.39
COL5A3-201ENST00000264828 KIAA0087Q14695 138 aa12.62□□□□□ -0.39
COL5A3-201ENST00000264828 C22orf24Q9Y442 160 aa12.61□□□□□ -0.39
COL5A3-201ENST00000264828 IGKV2D-30A0A075B6S6 120 aa12.61□□□□□ -0.39
COL5A3-201ENST00000264828 IGKV2-30P06310 120 aa12.61□□□□□ -0.39
COL5A3-201ENST00000264828 hDV103S1A0JD37 113 aa12.61□□□□□ -0.39
COL5A3-201ENST00000264828 CXCL6P80162 114 aa12.6□□□□□ -0.39
COL5A3-201ENST00000264828 BDP1A6H8Y1 2624 aa12.59□□□□□ -0.39
COL5A3-201ENST00000264828 F8WDY8 70 aa12.59□□□□□ -0.39
COL5A3-201ENST00000264828 C7orf65Q6ZTY9 151 aa12.58□□□□□ -0.39
COL5A3-201ENST00000264828 PRRC2AP48634 2157 aaKnown RBP12.58□□□□□ -0.4
COL5A3-201ENST00000264828 SPATA3Q8NHX4 192 aa12.58□□□□□ -0.4
COL5A3-201ENST00000264828 C1orf134Q5TEV5 83 aa12.57□□□□□ -0.4
COL5A3-201ENST00000264828 LINC01561Q8N1V8 128 aa12.56□□□□□ -0.4
COL5A3-201ENST00000264828 Q8N2B8 174 aa12.56□□□□□ -0.4
COL5A3-201ENST00000264828 PTPN13Q12923 2485 aa12.56□□□□□ -0.4
COL5A3-201ENST00000264828 KIF25-AS1Q9Y6Z4 181 aa12.55□□□□□ -0.4
COL5A3-201ENST00000264828 HIVEP3Q5T1R4 2406 aa12.55□□□□□ -0.4
COL5A3-201ENST00000264828 NAV3Q8IVL0 2385 aa12.53□□□□□ -0.4
COL5A3-201ENST00000264828 SONP18583 2426 aaKnown RBP12.53□□□□□ -0.4
COL5A3-201ENST00000264828 SMCPP49901 116 aaPredicted RBP12.52□□□□□ -0.4
COL5A3-201ENST00000264828 C4orf26Q17RF5 130 aa12.52□□□□□ -0.4
COL5A3-201ENST00000264828 ACACBO00763 2458 aa12.52□□□□□ -0.4
COL5A3-201ENST00000264828 AGRNO00468 2067 aa12.52□□□□□ -0.41
COL5A3-201ENST00000264828 CUL9Q8IWT3 2517 aa12.52□□□□□ -0.41
COL5A3-201ENST00000264828 IGLV5-39A0A0G2JS06 123 aa12.52□□□□□ -0.41
COL5A3-201ENST00000264828 FAM218AQ96MZ4 157 aa12.51□□□□□ -0.41
COL5A3-201ENST00000264828 COL4A2P08572 1712 aa12.51□□□□□ -0.41
COL5A3-201ENST00000264828 C11orf72Q8NBR9 251 aa12.51□□□□□ -0.41
COL5A3-201ENST00000264828 A0A1B0GU69 56 aa12.51□□□□□ -0.41
COL5A3-201ENST00000264828 LIMD2Q9BT23 127 aa12.51□□□□□ -0.41
COL5A3-201ENST00000264828 NOTCH2Q04721 2471 aa12.51□□□□□ -0.41
COL5A3-201ENST00000264828 EP400Q96L91 3159 aa12.5□□□□□ -0.41
COL5A3-201ENST00000264828 LINC01546A6NGU7 62 aa12.5□□□□□ -0.41
COL5A3-201ENST00000264828 PRO0628Q9UI54 55 aa12.48□□□□□ -0.41
COL5A3-201ENST00000264828 MOBPQ13875 183 aa12.47□□□□□ -0.41
COL5A3-201ENST00000264828 SPAG11AQ6PDA7 123 aa12.47□□□□□ -0.41
COL5A3-201ENST00000264828 SPACA4Q8TDM5 124 aa12.47□□□□□ -0.41
COL5A3-201ENST00000264828 LINC00167Q96N53 147 aa12.46□□□□□ -0.41
COL5A3-201ENST00000264828 C6orf48Q9UBA6 75 aa12.46□□□□□ -0.41
COL5A3-201ENST00000264828 ATRXP46100 2492 aa12.45□□□□□ -0.42
COL5A3-201ENST00000264828 IGHV3OR16-9A0A0B4J2B5 98 aa12.45□□□□□ -0.42
COL5A3-201ENST00000264828 FHL3Q13643 280 aa12.43□□□□□ -0.42
COL5A3-201ENST00000264828 FSHBP01225 129 aa12.43□□□□□ -0.42
COL5A3-201ENST00000264828 LINC00315P59091 139 aa12.43□□□□□ -0.42
COL5A3-201ENST00000264828 C2CD3Q4AC94 2353 aa12.41□□□□□ -0.42
COL5A3-201ENST00000264828 ACYP2P14621 99 aa12.41□□□□□ -0.42
COL5A3-201ENST00000264828 PRO0461Q9UI25 63 aa12.39□□□□□ -0.43
COL5A3-201ENST00000264828 FAM19A4Q96LR4 140 aa12.39□□□□□ -0.43
COL5A3-201ENST00000264828 IGLV8-61A0A075B6I0 122 aa12.38□□□□□ -0.43
COL5A3-201ENST00000264828 SERTAD4-AS1Q5TG53 156 aa12.38□□□□□ -0.43
COL5A3-201ENST00000264828 Q6ZQT0 140 aa12.38□□□□□ -0.43
COL5A3-201ENST00000264828 ELOF1P60002 83 aaKnown RBP12.38□□□□□ -0.43
COL5A3-201ENST00000264828 RPL37AP61513 92 aaKnown RBP12.38□□□□□ -0.43
COL5A3-201ENST00000264828 MDFIQ99750 246 aa12.37□□□□□ -0.43
COL5A3-201ENST00000264828 PHF5AQ7RTV0 110 aaKnown RBP12.37□□□□□ -0.43
COL5A3-201ENST00000264828 TP53AIP1Q9HCN2 124 aa12.36□□□□□ -0.43
COL5A3-201ENST00000264828 LINC00476Q8WZB0 136 aa12.36□□□□□ -0.43
COL5A3-201ENST00000264828 CHTF8P0CG12 524 aa12.35□□□□□ -0.43
COL5A3-201ENST00000264828 TM2D3Q9BRN9 247 aa12.35□□□□□ -0.43
COL5A3-201ENST00000264828 ST20-AS1Q8NBB2 130 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms