RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 TMEM254Q8TBM7 123 aa9.6□□□□□ -0.87
CNTNAP1-201ENST00000264638 IGLV2-18A0A075B6J9 118 aa9.6□□□□□ -0.87
CNTNAP1-201ENST00000264638 SMIM1B2RUZ4 78 aa9.6□□□□□ -0.87
CNTNAP1-201ENST00000264638 NANOS2P60321 138 aaKnown RBP9.6□□□□□ -0.87
CNTNAP1-201ENST00000264638 CDIP1Q9H305 208 aa9.6□□□□□ -0.87
CNTNAP1-201ENST00000264638 CHD8Q9HCK8 2581 aa9.59□□□□□ -0.87
CNTNAP1-201ENST00000264638 C1orf137Q5JT78 98 aa9.59□□□□□ -0.87
CNTNAP1-201ENST00000264638 TLN2Q9Y4G6 2542 aa9.59□□□□□ -0.87
CNTNAP1-201ENST00000264638 SRCAPQ6ZRS2 3230 aa9.59□□□□□ -0.87
CNTNAP1-201ENST00000264638 TRBV10-3A0A0K0K1G6 114 aa9.59□□□□□ -0.87
CNTNAP1-201ENST00000264638 A0A087WYN8 130 aa9.58□□□□□ -0.88
CNTNAP1-201ENST00000264638 PRM2P04554 102 aa9.58□□□□□ -0.88
CNTNAP1-201ENST00000264638 NUPR2A6NF83 97 aa9.58□□□□□ -0.88
CNTNAP1-201ENST00000264638 ESRGQ1W209 222 aa9.58□□□□□ -0.88
CNTNAP1-201ENST00000264638 C10orf25Q5T742 122 aa9.58□□□□□ -0.88
CNTNAP1-201ENST00000264638 CYSRT1A8MQ03 144 aa9.57□□□□□ -0.88
CNTNAP1-201ENST00000264638 TSPEAR-AS2P59090 65 aa9.57□□□□□ -0.88
CNTNAP1-201ENST00000264638 EGFEM1PQ0D2K5 195 aa9.57□□□□□ -0.88
CNTNAP1-201ENST00000264638 EDN2P20800 178 aa9.56□□□□□ -0.88
CNTNAP1-201ENST00000264638 LY6G6CO95867 125 aa9.56□□□□□ -0.88
CNTNAP1-201ENST00000264638 hDV103S1A0JD37 113 aa9.56□□□□□ -0.88
CNTNAP1-201ENST00000264638 LINC00474Q9P2X8 69 aa9.55□□□□□ -0.88
CNTNAP1-201ENST00000264638 RPS28P62857 69 aaKnown RBP9.55□□□□□ -0.88
CNTNAP1-201ENST00000264638 RPL37AP8A6NKH3 93 aa9.55□□□□□ -0.88
CNTNAP1-201ENST00000264638 COX8CQ7Z4L0 72 aa9.55□□□□□ -0.88
CNTNAP1-201ENST00000264638 LIMD2Q9BT23 127 aa9.55□□□□□ -0.88
CNTNAP1-201ENST00000264638 M0R2N4 97 aa9.55□□□□□ -0.88
CNTNAP1-201ENST00000264638 Q6ZVQ6 151 aa9.55□□□□□ -0.88
CNTNAP1-201ENST00000264638 AMELXQ99217 191 aa9.54□□□□□ -0.88
CNTNAP1-201ENST00000264638 USP9YO00507 2555 aaPredicted RBP9.54□□□□□ -0.88
CNTNAP1-201ENST00000264638 CRYGAP11844 174 aa9.54□□□□□ -0.88
CNTNAP1-201ENST00000264638 RAI1Q7Z5J4 1906 aaPredicted RBP9.54□□□□□ -0.88
CNTNAP1-201ENST00000264638 CPAMD8Q8IZJ3 1885 aa9.54□□□□□ -0.88
CNTNAP1-201ENST00000264638 LINC01547P58512 204 aaPredicted RBP9.54□□□□□ -0.88
CNTNAP1-201ENST00000264638 FN1P02751 2386 aaKnown RBP9.54□□□□□ -0.88
CNTNAP1-201ENST00000264638 PLAC8L1A1L4L8 177 aa9.54□□□□□ -0.88
CNTNAP1-201ENST00000264638 BCE1O60756 84 aa9.53□□□□□ -0.88
CNTNAP1-201ENST00000264638 ADAMTSL4-AS1Q5T5F5 129 aa9.53□□□□□ -0.88
CNTNAP1-201ENST00000264638 CXCL6P80162 114 aa9.53□□□□□ -0.88
CNTNAP1-201ENST00000264638 LINC00846Q9NV44 126 aa9.52□□□□□ -0.88
CNTNAP1-201ENST00000264638 A0A096LNJ9 63 aa9.52□□□□□ -0.89
CNTNAP1-201ENST00000264638 H0Y9P7 68 aa9.52□□□□□ -0.89
CNTNAP1-201ENST00000264638 SPTBN4Q9H254 2564 aa9.52□□□□□ -0.89
CNTNAP1-201ENST00000264638 GOLGB1Q14789 3259 aaKnown RBP9.52□□□□□ -0.89
CNTNAP1-201ENST00000264638 IGLV9-49A0A0B4J1Y8 123 aa9.52□□□□□ -0.89
CNTNAP1-201ENST00000264638 BEAN1Q3B7T3 259 aa9.52□□□□□ -0.89
CNTNAP1-201ENST00000264638 LINC00575Q6W349 94 aa9.51□□□□□ -0.89
CNTNAP1-201ENST00000264638 LRRK2Q5S007 2527 aa9.51□□□□□ -0.89
CNTNAP1-201ENST00000264638 WDR87Q6ZQQ6 2873 aa9.51□□□□□ -0.89
CNTNAP1-201ENST00000264638 UNQ6190/PRO20217Q6UXQ8 127 aa9.51□□□□□ -0.89
CNTNAP1-201ENST00000264638 ADAMTS20P59510 1910 aa9.5□□□□□ -0.89
CNTNAP1-201ENST00000264638 Q8N2B8 174 aa9.5□□□□□ -0.89
CNTNAP1-201ENST00000264638 FHL2Q14192 279 aa9.49□□□□□ -0.89
CNTNAP1-201ENST00000264638 COX6A2Q02221 97 aa9.48□□□□□ -0.89
CNTNAP1-201ENST00000264638 HCG22E2RYF7 251 aa9.48□□□□□ -0.89
CNTNAP1-201ENST00000264638 F8WDY8 70 aa9.48□□□□□ -0.89
CNTNAP1-201ENST00000264638 Q6ZTC4 211 aa9.47□□□□□ -0.89
CNTNAP1-201ENST00000264638 PCOTHQ58A44 107 aa9.47□□□□□ -0.89
CNTNAP1-201ENST00000264638 ZNF462Q96JM2 2506 aa9.47□□□□□ -0.89
CNTNAP1-201ENST00000264638 REG3GQ6UW15 175 aa9.47□□□□□ -0.89
CNTNAP1-201ENST00000264638 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.89
CNTNAP1-201ENST00000264638 EXPH5Q8NEV8 1989 aa9.45□□□□□ -0.9
CNTNAP1-201ENST00000264638 PRO0461Q9UI25 63 aa9.45□□□□□ -0.9
CNTNAP1-201ENST00000264638 NHLRC4P0CG21 123 aaPredicted RBP9.44□□□□□ -0.9
CNTNAP1-201ENST00000264638 IGHV6-1A0A0B4J1U7 121 aa9.44□□□□□ -0.9
CNTNAP1-201ENST00000264638 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
CNTNAP1-201ENST00000264638 FASNP49327 2511 aaKnown RBP9.43□□□□□ -0.9
CNTNAP1-201ENST00000264638 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
CNTNAP1-201ENST00000264638 SERTAD4-AS1Q5TG53 156 aa9.43□□□□□ -0.9
CNTNAP1-201ENST00000264638 SETD2Q9BYW2 2564 aaPredicted RBP9.42□□□□□ -0.9
CNTNAP1-201ENST00000264638 A0A1B0GUV1 79 aa9.42□□□□□ -0.9
CNTNAP1-201ENST00000264638 VPREB1P12018 145 aa9.42□□□□□ -0.9
CNTNAP1-201ENST00000264638 A0A087WSZ3 146 aa9.41□□□□□ -0.9
CNTNAP1-201ENST00000264638 IGLV4-60A0A075B6I1 120 aa9.41□□□□□ -0.9
CNTNAP1-201ENST00000264638 EML5Q05BV3 1969 aa9.41□□□□□ -0.9
CNTNAP1-201ENST00000264638 Q9BRP9 147 aa9.4□□□□□ -0.9
CNTNAP1-201ENST00000264638 SMCPP49901 116 aaPredicted RBP9.4□□□□□ -0.9
CNTNAP1-201ENST00000264638 C1orf64Q8NEQ6 169 aa9.4□□□□□ -0.9
CNTNAP1-201ENST00000264638 C4orf26Q17RF5 130 aa9.4□□□□□ -0.91
CNTNAP1-201ENST00000264638 LINC01546A6NGU7 62 aa9.39□□□□□ -0.91
CNTNAP1-201ENST00000264638 COL4A2P08572 1712 aa9.39□□□□□ -0.91
CNTNAP1-201ENST00000264638 C2orf48Q96LS8 159 aa9.39□□□□□ -0.91
CNTNAP1-201ENST00000264638 LYPD5Q6UWN5 251 aa9.38□□□□□ -0.91
CNTNAP1-201ENST00000264638 LINC00337Q8N6G1 96 aa9.38□□□□□ -0.91
CNTNAP1-201ENST00000264638 C6orf223Q8N319 242 aa9.37□□□□□ -0.91
CNTNAP1-201ENST00000264638 SPAG11AQ6PDA7 123 aa9.37□□□□□ -0.91
CNTNAP1-201ENST00000264638 A0A1B0GW54 56 aa9.36□□□□□ -0.91
CNTNAP1-201ENST00000264638 FHL3Q13643 280 aa9.36□□□□□ -0.91
CNTNAP1-201ENST00000264638 IGLV5-52A0A0A0MRZ9 124 aa9.35□□□□□ -0.91
CNTNAP1-201ENST00000264638 Q6ZSN1 163 aa9.35□□□□□ -0.91
CNTNAP1-201ENST00000264638 PKD1L2Q7Z442 2459 aa9.34□□□□□ -0.91
CNTNAP1-201ENST00000264638 IGLV5-39A0A0G2JS06 123 aa9.34□□□□□ -0.91
CNTNAP1-201ENST00000264638 SMIM29Q86T20 159 aa9.34□□□□□ -0.91
CNTNAP1-201ENST00000264638 MTORP42345 2549 aa9.34□□□□□ -0.91
CNTNAP1-201ENST00000264638 A0A1B0GU69 56 aa9.34□□□□□ -0.91
CNTNAP1-201ENST00000264638 H3BPC8 53 aa9.34□□□□□ -0.91
CNTNAP1-201ENST00000264638 C1orf134Q5TEV5 83 aa9.34□□□□□ -0.91
CNTNAP1-201ENST00000264638 TP53AIP1Q9HCN2 124 aa9.34□□□□□ -0.91
CNTNAP1-201ENST00000264638 SPINK1P00995 79 aa9.33□□□□□ -0.92
CNTNAP1-201ENST00000264638 SBSPONQ8IVN8 264 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms