RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 MIAQ16674 131 aa12.18□□□□□ -0.46
SDF4-201ENST00000263741 LYRM7Q5U5X0 104 aa12.18□□□□□ -0.46
SDF4-201ENST00000263741 DGAT2L7PQ6IED9 249 aa12.18□□□□□ -0.46
SDF4-201ENST00000263741 C1orf43Q9BWL3 253 aa12.18□□□□□ -0.46
SDF4-201ENST00000263741 PKHD1P08F94 4074 aa12.18□□□□□ -0.46
SDF4-201ENST00000263741 A0A1B0GVY2 172 aa12.18□□□□□ -0.46
SDF4-201ENST00000263741 WFDC2Q14508 124 aa12.18□□□□□ -0.46
SDF4-201ENST00000263741 FUSP35637 526 aaKnown RBP eCLIP12.17□□□□□ -0.464e-7■■■■□ 20.8
SDF4-201ENST00000263741 CDC42SE2Q9NRR3 84 aa12.17□□□□□ -0.46
SDF4-201ENST00000263741 RMI2Q96E14 147 aa12.17□□□□□ -0.46
SDF4-201ENST00000263741 FAM104AQ969W3 186 aa12.16□□□□□ -0.46
SDF4-201ENST00000263741 A0A087WTM6 91 aa12.15□□□□□ -0.46
SDF4-201ENST00000263741 TMEM170BQ5T4T1 132 aa12.15□□□□□ -0.46
SDF4-201ENST00000263741 LRCOL1A6NCL2 159 aa12.15□□□□□ -0.46
SDF4-201ENST00000263741 KRTAP26-1Q6PEX3 210 aa12.15□□□□□ -0.46
SDF4-201ENST00000263741 PGPEP1Q9NXJ5 209 aa12.15□□□□□ -0.46
SDF4-201ENST00000263741 TIMM21Q9BVV7 248 aa12.14□□□□□ -0.47
SDF4-201ENST00000263741 SPANXB1Q9NS25 103 aaPredicted RBP12.14□□□□□ -0.47
SDF4-201ENST00000263741 LGALS3P17931 250 aaKnown RBP12.14□□□□□ -0.47
SDF4-201ENST00000263741 PLEKHB2Q96CS7 222 aa12.14□□□□□ -0.47
SDF4-201ENST00000263741 SPANXA1Q9NS26 97 aa12.14□□□□□ -0.47
SDF4-201ENST00000263741 CSDC2Q9Y534 153 aaKnown RBP12.14□□□□□ -0.47
SDF4-201ENST00000263741 H3BMG7 143 aa12.13□□□□□ -0.47
SDF4-201ENST00000263741 UBE2D1P51668 147 aa12.12□□□□□ -0.47
SDF4-201ENST00000263741 KRTAP10-2P60368 255 aa12.12□□□□□ -0.47
SDF4-201ENST00000263741 LINC00959A0A1B0GUT2 108 aa12.11□□□□□ -0.47
SDF4-201ENST00000263741 SMAGPQ0VAQ4 97 aa12.11□□□□□ -0.47
SDF4-201ENST00000263741 CHCHD10Q8WYQ3 142 aaPredicted RBP12.11□□□□□ -0.47
SDF4-201ENST00000263741 IGLV4-3A0A075B6K6 122 aa12.1□□□□□ -0.47
SDF4-201ENST00000263741 TRAV13-1A0A0B4J241 112 aa12.1□□□□□ -0.47
SDF4-201ENST00000263741 XCL1P47992 114 aa12.1□□□□□ -0.47
SDF4-201ENST00000263741 TRAV8-4A0A0B4J246 113 aa12.1□□□□□ -0.47
SDF4-201ENST00000263741 GAGE12HA6NDE8 117 aa12.1□□□□□ -0.47
SDF4-201ENST00000263741 J3QQQ9 107 aa12.1□□□□□ -0.47
SDF4-201ENST00000263741 TMEM238C9JI98 176 aa12.09□□□□□ -0.47
SDF4-201ENST00000263741 LEPROTO15243 131 aa12.09□□□□□ -0.47
SDF4-201ENST00000263741 MRPS36P82909 103 aaKnown RBP12.08□□□□□ -0.48
SDF4-201ENST00000263741 PYGO1Q9Y3Y4 419 aa12.08□□□□□ -0.48
SDF4-201ENST00000263741 TSPAN13O95857 204 aa12.07□□□□□ -0.48
SDF4-201ENST00000263741 VCX2Q9H322 139 aa12.07□□□□□ -0.48
SDF4-201ENST00000263741 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.07□□□□□ -0.48
SDF4-201ENST00000263741 APOMO95445 188 aa12.07□□□□□ -0.48
SDF4-201ENST00000263741 Q8N814 137 aa12.07□□□□□ -0.48
SDF4-201ENST00000263741 DNAH5Q8TE73 4624 aa12.06□□□□□ -0.48
SDF4-201ENST00000263741 LOC107984156A0A0G2JMH3 177 aa12.06□□□□□ -0.48
SDF4-201ENST00000263741 TMEM223A0PJW6 202 aa12.06□□□□□ -0.48
SDF4-201ENST00000263741 USP17L23D6RBM5 183 aa12.06□□□□□ -0.48
SDF4-201ENST00000263741 TSPEAR-AS2P59090 65 aa12.06□□□□□ -0.48
SDF4-201ENST00000263741 SS18Q15532 418 aa12.06□□□□□ -0.48
SDF4-201ENST00000263741 ARL17AQ8IVW1 177 aa12.06□□□□□ -0.48
SDF4-201ENST00000263741 PRO0461Q9UI25 63 aa12.06□□□□□ -0.48
SDF4-201ENST00000263741 ETDBQ3ZM63 59 aa12.06□□□□□ -0.48
SDF4-201ENST00000263741 FOXI1Q12951 378 aa12.05□□□□□ -0.48
SDF4-201ENST00000263741 TRBV20-1A0A075B6N2 111 aa12.04□□□□□ -0.48
SDF4-201ENST00000263741 A4D1N5 150 aa12.04□□□□□ -0.48
SDF4-201ENST00000263741 ZNF22P17026 224 aaPredicted RBP12.04□□□□□ -0.48
SDF4-201ENST00000263741 PSMB2P49721 201 aa12.03□□□□□ -0.48
SDF4-201ENST00000263741 AMELXQ99217 191 aa12.03□□□□□ -0.48
SDF4-201ENST00000263741 DYNC1H1Q14204 4646 aaKnown RBP12.02□□□□□ -0.48
SDF4-201ENST00000263741 SCGB1A1P11684 91 aa12.02□□□□□ -0.49
SDF4-201ENST00000263741 SIGMAR1Q99720 223 aa12.02□□□□□ -0.49
SDF4-201ENST00000263741 PRO1854Q9UHT4 67 aa12.02□□□□□ -0.49
SDF4-201ENST00000263741 C15orf56Q8N910 161 aa12.01□□□□□ -0.49
SDF4-201ENST00000263741 C16orf90A8MZG2 172 aa12.01□□□□□ -0.49
SDF4-201ENST00000263741 CFC1BP0CG36 223 aa12.01□□□□□ -0.49
SDF4-201ENST00000263741 CFC1P0CG37 223 aa12.01□□□□□ -0.49
SDF4-201ENST00000263741 CD164L2Q6UWJ8 174 aa12.01□□□□□ -0.49
SDF4-201ENST00000263741 TRAV16A0A0A6YYK6 109 aaPredicted RBP12□□□□□ -0.49
SDF4-201ENST00000263741 HIGD2BQ4VC39 106 aa12□□□□□ -0.49
SDF4-201ENST00000263741 MTURNQ8N3F0 131 aa12□□□□□ -0.49
SDF4-201ENST00000263741 A0A0J9YXV3 536 aa11.99□□□□□ -0.49
SDF4-201ENST00000263741 C5orf38Q86SI9 138 aa11.99□□□□□ -0.49
SDF4-201ENST00000263741 IGLV5-52A0A0A0MRZ9 124 aa11.99□□□□□ -0.49
SDF4-201ENST00000263741 LINC01620Q4KN68 170 aa11.99□□□□□ -0.49
SDF4-201ENST00000263741 A0A0B4J2C4 111 aa11.98□□□□□ -0.49
SDF4-201ENST00000263741 COX6A2Q02221 97 aa11.98□□□□□ -0.49
SDF4-201ENST00000263741 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
SDF4-201ENST00000263741 SCGB1C2P0DMR2 95 aa11.98□□□□□ -0.49
SDF4-201ENST00000263741 NTN5Q8WTR8 489 aaPredicted RBP11.97□□□□□ -0.49
SDF4-201ENST00000263741 LINC00526Q96FQ7 95 aa11.97□□□□□ -0.49
SDF4-201ENST00000263741 COX7A2LO14548 114 aa11.96□□□□□ -0.49
SDF4-201ENST00000263741 SFTA2Q6UW10 78 aa11.96□□□□□ -0.49
SDF4-201ENST00000263741 LRP1BQ9NZR2 4599 aa11.96□□□□□ -0.49
SDF4-201ENST00000263741 IGHV3-64A0A075B6Q5 118 aa11.96□□□□□ -0.5
SDF4-201ENST00000263741 BIRC6Q9NR09 4857 aa11.96□□□□□ -0.5
SDF4-201ENST00000263741 IGHV3OR16-9A0A0B4J2B5 98 aa11.95□□□□□ -0.5
SDF4-201ENST00000263741 C14orf177Q52M58 125 aa11.95□□□□□ -0.5
SDF4-201ENST00000263741 ERG28Q9UKR5 140 aa11.95□□□□□ -0.5
SDF4-201ENST00000263741 TINCRA0A1B0GVN0 87 aa11.95□□□□□ -0.5
SDF4-201ENST00000263741 TCL1BO95988 128 aa11.95□□□□□ -0.5
SDF4-201ENST00000263741 MALP21145 153 aa11.95□□□□□ -0.5
SDF4-201ENST00000263741 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
SDF4-201ENST00000263741 PPDPFLQ8WWR9 84 aa11.94□□□□□ -0.5
SDF4-201ENST00000263741 IGHV1-58A0A0C4DH39 117 aa11.93□□□□□ -0.5
SDF4-201ENST00000263741 TEN1Q86WV5 123 aa11.93□□□□□ -0.5
SDF4-201ENST00000263741 SLPIP03973 132 aa11.93□□□□□ -0.5
SDF4-201ENST00000263741 SMCPP49901 116 aaPredicted RBP11.93□□□□□ -0.5
SDF4-201ENST00000263741 KRTAP10-1P60331 282 aa11.93□□□□□ -0.5
SDF4-201ENST00000263741 MUSTN1Q8IVN3 82 aa11.93□□□□□ -0.5
SDF4-201ENST00000263741 GVQW2A0A096LPI5 108 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms