RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 USP17L23D6RBM5 183 aa6.42□□□□□ -1.38
SNRNP40-201ENST00000263694 J3QQQ9 107 aa6.42□□□□□ -1.38
SNRNP40-201ENST00000263694 C1orf134Q5TEV5 83 aa6.42□□□□□ -1.38
SNRNP40-201ENST00000263694 COX7B2Q8TF08 81 aa6.42□□□□□ -1.38
SNRNP40-201ENST00000263694 DNAH2Q9P225 4427 aa6.42□□□□□ -1.38
SNRNP40-201ENST00000263694 KIAA0087Q14695 138 aa6.41□□□□□ -1.38
SNRNP40-201ENST00000263694 C2orf82Q6UX34 121 aa6.41□□□□□ -1.38
SNRNP40-201ENST00000263694 LINC01561Q8N1V8 128 aa6.41□□□□□ -1.38
SNRNP40-201ENST00000263694 APOMO95445 188 aa6.4□□□□□ -1.38
SNRNP40-201ENST00000263694 SPAG11BQ08648 103 aa6.4□□□□□ -1.38
SNRNP40-201ENST00000263694 C6orf226Q5I0X4 101 aa6.4□□□□□ -1.38
SNRNP40-201ENST00000263694 PLEKHB2Q96CS7 222 aa6.4□□□□□ -1.38
SNRNP40-201ENST00000263694 ZNF625Q96I27 306 aaPredicted RBP6.4□□□□□ -1.38
SNRNP40-201ENST00000263694 COX11Q9Y6N1 276 aa6.4□□□□□ -1.38
SNRNP40-201ENST00000263694 SACSQ9NZJ4 4579 aa6.4□□□□□ -1.38
SNRNP40-201ENST00000263694 LGALS3P17931 250 aaKnown RBP6.4□□□□□ -1.39
SNRNP40-201ENST00000263694 LRCOL1A6NCL2 159 aa6.39□□□□□ -1.39
SNRNP40-201ENST00000263694 PRSS2P07478 247 aa6.39□□□□□ -1.39
SNRNP40-201ENST00000263694 COX8AP10176 69 aa6.39□□□□□ -1.39
SNRNP40-201ENST00000263694 C10orf25Q5T742 122 aa6.39□□□□□ -1.39
SNRNP40-201ENST00000263694 CFAP161Q6P656 301 aa6.39□□□□□ -1.39
SNRNP40-201ENST00000263694 UNQ6190/PRO20217Q6UXQ8 127 aa6.39□□□□□ -1.39
SNRNP40-201ENST00000263694 Q8IZM0 81 aa6.39□□□□□ -1.39
SNRNP40-201ENST00000263694 NDUFA12Q9UI09 145 aa6.39□□□□□ -1.39
SNRNP40-201ENST00000263694 ZNF815PA8K554 130 aa6.38□□□□□ -1.39
SNRNP40-201ENST00000263694 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
SNRNP40-201ENST00000263694 RTL8CO15255 209 aa6.38□□□□□ -1.39
SNRNP40-201ENST00000263694 SLPIP03973 132 aa6.38□□□□□ -1.39
SNRNP40-201ENST00000263694 FRAS1Q86XX4 4008 aa6.38□□□□□ -1.39
SNRNP40-201ENST00000263694 GVQW2A0A096LPI5 108 aaPredicted RBP6.37□□□□□ -1.39
SNRNP40-201ENST00000263694 MYMXA0A1B0GTQ4 84 aa6.37□□□□□ -1.39
SNRNP40-201ENST00000263694 FUSP35637 526 aaKnown RBP eCLIP6.37□□□□□ -1.39
SNRNP40-201ENST00000263694 CKS1BP61024 79 aa6.37□□□□□ -1.39
SNRNP40-201ENST00000263694 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
SNRNP40-201ENST00000263694 BOD1L2Q8IYS8 172 aa6.37□□□□□ -1.39
SNRNP40-201ENST00000263694 NTN5Q8WTR8 489 aaPredicted RBP6.37□□□□□ -1.39
SNRNP40-201ENST00000263694 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.36□□□□□ -1.39
SNRNP40-201ENST00000263694 A0A0U1RRA0 63 aa6.36□□□□□ -1.39
SNRNP40-201ENST00000263694 NDUFA1O15239 70 aa6.36□□□□□ -1.39
SNRNP40-201ENST00000263694 SLC25A34Q6PIV7 304 aa6.36□□□□□ -1.39
SNRNP40-201ENST00000263694 A0A087WTM6 91 aa6.35□□□□□ -1.39
SNRNP40-201ENST00000263694 Q6ZRU5 148 aa6.35□□□□□ -1.39
SNRNP40-201ENST00000263694 CAMK2N2Q96S95 79 aa6.35□□□□□ -1.39
SNRNP40-201ENST00000263694 KMT2CQ8NEZ4 4911 aaKnown RBP6.35□□□□□ -1.39
SNRNP40-201ENST00000263694 A0A0J9YXY3 114 aa6.35□□□□□ -1.39
SNRNP40-201ENST00000263694 C6orf48Q9UBA6 75 aa6.35□□□□□ -1.39
SNRNP40-201ENST00000263694 DNAH17Q9UFH2 4485 aa6.35□□□□□ -1.39
SNRNP40-201ENST00000263694 SYCNQ0VAF6 134 aa6.34□□□□□ -1.39
SNRNP40-201ENST00000263694 SCGB1D4Q6XE38 83 aa6.34□□□□□ -1.39
SNRNP40-201ENST00000263694 C2orf91Q6ZV80 131 aa6.34□□□□□ -1.39
SNRNP40-201ENST00000263694 UQCR10Q9UDW1 63 aa6.34□□□□□ -1.39
SNRNP40-201ENST00000263694 DLEU1O43261 78 aa6.33□□□□□ -1.4
SNRNP40-201ENST00000263694 SMIM13P0DJ93 91 aa6.33□□□□□ -1.4
SNRNP40-201ENST00000263694 PFN2P35080 140 aa6.33□□□□□ -1.4
SNRNP40-201ENST00000263694 ADAMTSL4-AS1Q5T5F5 129 aa6.33□□□□□ -1.4
SNRNP40-201ENST00000263694 Q8N814 137 aa6.33□□□□□ -1.4
SNRNP40-201ENST00000263694 DAND5Q8N907 189 aa6.33□□□□□ -1.4
SNRNP40-201ENST00000263694 C2orf48Q96LS8 159 aa6.33□□□□□ -1.4
SNRNP40-201ENST00000263694 MIEN1Q9BRT3 115 aa6.33□□□□□ -1.4
SNRNP40-201ENST00000263694 HECTD4Q9Y4D8 3996 aa6.32□□□□□ -1.4
SNRNP40-201ENST00000263694 TSTD3H0UI37 97 aa6.32□□□□□ -1.4
SNRNP40-201ENST00000263694 CXCL5P42830 114 aa6.32□□□□□ -1.4
SNRNP40-201ENST00000263694 LINC01620Q4KN68 170 aa6.32□□□□□ -1.4
SNRNP40-201ENST00000263694 MEIG1Q5JSS6 88 aa6.32□□□□□ -1.4
SNRNP40-201ENST00000263694 RYR2Q92736 4967 aa6.32□□□□□ -1.4
SNRNP40-201ENST00000263694 PCP4L1A6NKN8 68 aa6.31□□□□□ -1.4
SNRNP40-201ENST00000263694 NPC2P61916 151 aa6.31□□□□□ -1.4
SNRNP40-201ENST00000263694 HERV-K104P63124 156 aa6.31□□□□□ -1.4
SNRNP40-201ENST00000263694 C14orf177Q52M58 125 aa6.31□□□□□ -1.4
SNRNP40-201ENST00000263694 CARD19Q96LW7 228 aa6.31□□□□□ -1.4
SNRNP40-201ENST00000263694 LITAFQ99732 161 aa6.31□□□□□ -1.4
SNRNP40-201ENST00000263694 ERG28Q9UKR5 140 aa6.31□□□□□ -1.4
SNRNP40-201ENST00000263694 LINC00158P58513 81 aa6.31□□□□□ -1.4
SNRNP40-201ENST00000263694 FAT2Q9NYQ8 4349 aa6.31□□□□□ -1.4
SNRNP40-201ENST00000263694 TRBV30A0A0K0K1B3 111 aa6.3□□□□□ -1.4
SNRNP40-201ENST00000263694 A6NJY4 79 aa6.3□□□□□ -1.4
SNRNP40-201ENST00000263694 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
SNRNP40-201ENST00000263694 HNRNPA3P51991 378 aaKnown RBP6.3□□□□□ -1.4
SNRNP40-201ENST00000263694 KRTAP4-9Q9BYQ8 210 aa6.3□□□□□ -1.4
SNRNP40-201ENST00000263694 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
SNRNP40-201ENST00000263694 CNBPP62633 177 aaKnown RBP6.29□□□□□ -1.4
SNRNP40-201ENST00000263694 MIR7-3HGQ8N6C7 128 aa6.29□□□□□ -1.4
SNRNP40-201ENST00000263694 F8WDY8 70 aa6.28□□□□□ -1.4
SNRNP40-201ENST00000263694 DDTP30046 118 aa6.28□□□□□ -1.4
SNRNP40-201ENST00000263694 CTAG1AP78358 180 aa6.28□□□□□ -1.4
SNRNP40-201ENST00000263694 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
SNRNP40-201ENST00000263694 HIGD1BQ9P298 99 aa6.28□□□□□ -1.4
SNRNP40-201ENST00000263694 DNAH11Q96DT5 4516 aa6.27□□□□□ -1.4
SNRNP40-201ENST00000263694 EREGO14944 169 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 RPL18AQ02543 176 aaKnown RBP6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 SRSF9Q13242 221 aaKnown RBP eCLIP6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 CIRBPQ14011 172 aaKnown RBP6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 GAGE2EQ4V326 116 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 SOSTDC1Q6X4U4 206 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 Q6ZRP5 223 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 HIST1H4GQ99525 98 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 GAGE2DQ9UEU5 116 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 PKD1P98161 4303 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 TMEM238C9JI98 176 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms