RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 KRTDAPP60985 99 aa5.43□□□□□ -1.54
LCN1-201ENST00000263598 SPAG11BQ08648 103 aa5.43□□□□□ -1.54
LCN1-201ENST00000263598 PRR4Q16378 134 aa5.43□□□□□ -1.54
LCN1-201ENST00000263598 RNF151Q2KHN1 245 aa5.43□□□□□ -1.54
LCN1-201ENST00000263598 SPATA45Q537H7 98 aa5.43□□□□□ -1.54
LCN1-201ENST00000263598 OPRPNQ99935 248 aaPredicted RBP5.43□□□□□ -1.54
LCN1-201ENST00000263598 ALKBH7Q9BT30 221 aaPredicted RBP5.43□□□□□ -1.54
LCN1-201ENST00000263598 LAMTOR2Q9Y2Q5 125 aa5.43□□□□□ -1.54
LCN1-201ENST00000263598 PAM16Q9Y3D7 125 aa5.43□□□□□ -1.54
LCN1-201ENST00000263598 CSDC2Q9Y534 153 aaKnown RBP5.43□□□□□ -1.54
LCN1-201ENST00000263598 TRAV13-1A0A0B4J241 112 aa5.42□□□□□ -1.54
LCN1-201ENST00000263598 VCYO14598 125 aa5.42□□□□□ -1.54
LCN1-201ENST00000263598 UBE2D1P51668 147 aa5.42□□□□□ -1.54
LCN1-201ENST00000263598 C5orf38Q86SI9 138 aa5.42□□□□□ -1.54
LCN1-201ENST00000263598 HSPB8Q9UJY1 196 aa5.42□□□□□ -1.54
LCN1-201ENST00000263598 HIGD1CA8MV81 97 aa5.41□□□□□ -1.54
LCN1-201ENST00000263598 F8WDY8 70 aa5.41□□□□□ -1.54
LCN1-201ENST00000263598 RPL13AP40429 203 aaKnown RBP5.41□□□□□ -1.54
LCN1-201ENST00000263598 RNASE13Q5GAN3 156 aaKnown RBP5.41□□□□□ -1.54
LCN1-201ENST00000263598 Q6ZN92 141 aa5.41□□□□□ -1.54
LCN1-201ENST00000263598 KIR2DL4Q99706 377 aa5.41□□□□□ -1.54
LCN1-201ENST00000263598 TMEM191AQ9H0A3 160 aa5.41□□□□□ -1.54
LCN1-201ENST00000263598 MRPL35Q9NZE8 188 aaKnown RBP5.41□□□□□ -1.54
LCN1-201ENST00000263598 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
LCN1-201ENST00000263598 MUC2Q02817 5179 aa5.41□□□□□ -1.54
LCN1-201ENST00000263598 A0A1B0GUT8 65 aa5.4□□□□□ -1.54
LCN1-201ENST00000263598 HSBP1L1C9JCN9 74 aa5.4□□□□□ -1.54
LCN1-201ENST00000263598 PPP1R17O96001 155 aa5.4□□□□□ -1.54
LCN1-201ENST00000263598 RIGQ13278 110 aa5.4□□□□□ -1.54
LCN1-201ENST00000263598 MRPL54Q6P161 138 aaKnown RBP5.4□□□□□ -1.54
LCN1-201ENST00000263598 FAM168BA1KXE4 195 aa5.39□□□□□ -1.55
LCN1-201ENST00000263598 NDUFA1O15239 70 aa5.39□□□□□ -1.55
LCN1-201ENST00000263598 Q6ZUT4 128 aa5.39□□□□□ -1.55
LCN1-201ENST00000263598 FAM19A5Q7Z5A7 132 aaPredicted RBP5.39□□□□□ -1.55
LCN1-201ENST00000263598 AMN1Q8IY45 258 aa5.39□□□□□ -1.55
LCN1-201ENST00000263598 TIMM21Q9BVV7 248 aa5.39□□□□□ -1.55
LCN1-201ENST00000263598 KRTAP9-2Q9BYQ4 174 aa5.39□□□□□ -1.55
LCN1-201ENST00000263598 SYS1-DBNDD2H3BUS1 97 aa5.38□□□□□ -1.55
LCN1-201ENST00000263598 LEPROTL1O95214 131 aa5.38□□□□□ -1.55
LCN1-201ENST00000263598 KRTAP1-4P0C5Y4 121 aa5.38□□□□□ -1.55
LCN1-201ENST00000263598 TLX1NBP0CAT3 122 aa5.38□□□□□ -1.55
LCN1-201ENST00000263598 SUMO2P61956 95 aaKnown RBP5.38□□□□□ -1.55
LCN1-201ENST00000263598 UBE2BP63146 152 aa5.38□□□□□ -1.55
LCN1-201ENST00000263598 KRTAP11-1Q8IUC1 163 aa5.38□□□□□ -1.55
LCN1-201ENST00000263598 MAP1LC3CQ9BXW4 147 aa5.38□□□□□ -1.55
LCN1-201ENST00000263598 SMKR1H3BMG3 65 aa5.37□□□□□ -1.55
LCN1-201ENST00000263598 M0QXV9 152 aa5.37□□□□□ -1.55
LCN1-201ENST00000263598 UBE2V1Q13404 147 aa5.37□□□□□ -1.55
LCN1-201ENST00000263598 KIAA1644Q3SXP7 199 aa5.37□□□□□ -1.55
LCN1-201ENST00000263598 GAGE2EQ4V326 116 aa5.37□□□□□ -1.55
LCN1-201ENST00000263598 LINC01545Q5VT33 79 aa5.37□□□□□ -1.55
LCN1-201ENST00000263598 SLC25A34Q6PIV7 304 aa5.37□□□□□ -1.55
LCN1-201ENST00000263598 GAGE2DQ9UEU5 116 aa5.37□□□□□ -1.55
LCN1-201ENST00000263598 IGHV3OR16-9A0A0B4J2B5 98 aa5.36□□□□□ -1.55
LCN1-201ENST00000263598 PPBPP02775 128 aa5.36□□□□□ -1.55
LCN1-201ENST00000263598 SEC11AP67812 179 aa5.36□□□□□ -1.55
LCN1-201ENST00000263598 C10orf25Q5T742 122 aa5.36□□□□□ -1.55
LCN1-201ENST00000263598 UNQ6190/PRO20217Q6UXQ8 127 aa5.36□□□□□ -1.55
LCN1-201ENST00000263598 NRACQ8N912 160 aa5.36□□□□□ -1.55
LCN1-201ENST00000263598 C6orf48Q9UBA6 75 aa5.36□□□□□ -1.55
LCN1-201ENST00000263598 G0S2P27469 103 aa5.35□□□□□ -1.55
LCN1-201ENST00000263598 FAM19A2Q8N3H0 131 aa5.35□□□□□ -1.55
LCN1-201ENST00000263598 C20orf78Q9BR46 151 aa5.35□□□□□ -1.55
LCN1-201ENST00000263598 SPANXA1Q9NS26 97 aa5.35□□□□□ -1.55
LCN1-201ENST00000263598 LINC01546A6NGU7 62 aa5.34□□□□□ -1.55
LCN1-201ENST00000263598 NPSP0C0P6 89 aa5.34□□□□□ -1.55
LCN1-201ENST00000263598 URB1-AS1Q96HZ7 61 aa5.34□□□□□ -1.55
LCN1-201ENST00000263598 TRBV30A0A0K0K1B3 111 aa5.33□□□□□ -1.56
LCN1-201ENST00000263598 NDUFC2-KCTD14E9PQ53 114 aa5.33□□□□□ -1.56
LCN1-201ENST00000263598 ZNF861PO60384 105 aa5.33□□□□□ -1.56
LCN1-201ENST00000263598 TSPAN13O95857 204 aa5.33□□□□□ -1.56
LCN1-201ENST00000263598 COX8AP10176 69 aa5.33□□□□□ -1.56
LCN1-201ENST00000263598 RPL39P62891 51 aaKnown RBP5.33□□□□□ -1.56
LCN1-201ENST00000263598 MRPS36P82909 103 aaKnown RBP5.33□□□□□ -1.56
LCN1-201ENST00000263598 FA2HQ7L5A8 372 aa5.33□□□□□ -1.56
LCN1-201ENST00000263598 KRTAP7-1Q8IUC3 87 aa5.33□□□□□ -1.56
LCN1-201ENST00000263598 CKS2P33552 79 aa5.32□□□□□ -1.56
LCN1-201ENST00000263598 RPL32P62910 135 aaKnown RBP5.32□□□□□ -1.56
LCN1-201ENST00000263598 BATFQ16520 125 aa5.32□□□□□ -1.56
LCN1-201ENST00000263598 MRPL51Q4U2R6 128 aaKnown RBP5.32□□□□□ -1.56
LCN1-201ENST00000263598 FAM104BQ5XKR9 115 aa5.32□□□□□ -1.56
LCN1-201ENST00000263598 ORMDL3Q8N138 153 aa5.32□□□□□ -1.56
LCN1-201ENST00000263598 A6NDN8 102 aa5.31□□□□□ -1.56
LCN1-201ENST00000263598 PRSS47A8MTI9 375 aa5.31□□□□□ -1.56
LCN1-201ENST00000263598 TNFRSF6BO95407 300 aa5.31□□□□□ -1.56
LCN1-201ENST00000263598 KIAA0087Q14695 138 aa5.31□□□□□ -1.56
LCN1-201ENST00000263598 C9orf129Q5T035 196 aaKnown RBP5.31□□□□□ -1.56
LCN1-201ENST00000263598 BVES-AS1Q5T3Y7 98 aa5.31□□□□□ -1.56
LCN1-201ENST00000263598 BOD1L2Q8IYS8 172 aa5.31□□□□□ -1.56
LCN1-201ENST00000263598 FAM104AQ969W3 186 aa5.31□□□□□ -1.56
LCN1-201ENST00000263598 SMIM2Q9BVW6 85 aa5.31□□□□□ -1.56
LCN1-201ENST00000263598 NXT2Q9NPJ8 142 aaKnown RBP5.31□□□□□ -1.56
LCN1-201ENST00000263598 LINC01549A6NIU2 74 aa5.3□□□□□ -1.56
LCN1-201ENST00000263598 K7EMI3 77 aa5.3□□□□□ -1.56
LCN1-201ENST00000263598 HBDP02042 147 aa5.3□□□□□ -1.56
LCN1-201ENST00000263598 IFI27P40305 119 aaPredicted RBP5.3□□□□□ -1.56
LCN1-201ENST00000263598 HINT1P49773 126 aaPredicted RBP5.3□□□□□ -1.56
LCN1-201ENST00000263598 LCE2AQ5TA79 106 aaPredicted RBP5.3□□□□□ -1.56
LCN1-201ENST00000263598 C2orf82Q6UX34 121 aa5.3□□□□□ -1.56
LCN1-201ENST00000263598 GTF2H5Q6ZYL4 71 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms