RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 B4DSR2 109 aa11.35□□□□□ -0.59
PRPF40B-201ENST00000261897 FBXL19-AS1Q494R0 122 aa11.35□□□□□ -0.59
PRPF40B-201ENST00000261897 NTM-AS1Q6ZSK4 140 aa11.35□□□□□ -0.59
PRPF40B-201ENST00000261897 IGLV4-60A0A075B6I1 120 aa11.34□□□□□ -0.59
PRPF40B-201ENST00000261897 C2orf48Q96LS8 159 aa11.34□□□□□ -0.59
PRPF40B-201ENST00000261897 Q6JHZ5 121 aa11.34□□□□□ -0.59
PRPF40B-201ENST00000261897 DOPEY1Q5JWR5 2465 aa11.33□□□□□ -0.6
PRPF40B-201ENST00000261897 IGKV2-28A0A075B6P5 120 aa11.33□□□□□ -0.6
PRPF40B-201ENST00000261897 IGKV2D-28P01615 120 aa11.33□□□□□ -0.6
PRPF40B-201ENST00000261897 C9orf116Q5BN46 136 aaPredicted RBP11.33□□□□□ -0.6
PRPF40B-201ENST00000261897 UTP20O75691 2785 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-201ENST00000261897 CELSR2Q9HCU4 2923 aa11.32□□□□□ -0.6
PRPF40B-201ENST00000261897 IGLV5-39A0A0G2JS06 123 aa11.32□□□□□ -0.6
PRPF40B-201ENST00000261897 C6orf99Q4VX62 202 aa11.32□□□□□ -0.6
PRPF40B-201ENST00000261897 TEX15Q9BXT5 2789 aa11.32□□□□□ -0.6
PRPF40B-201ENST00000261897 FAM222AQ5U5X8 452 aa11.31□□□□□ -0.6
PRPF40B-201ENST00000261897 TRAV25A0A0B4J276 109 aa11.31□□□□□ -0.6
PRPF40B-201ENST00000261897 ZFHX3Q15911 3703 aa11.31□□□□□ -0.6
PRPF40B-201ENST00000261897 RMI2Q96E14 147 aa11.3□□□□□ -0.6
PRPF40B-201ENST00000261897 PF4P02776 101 aa11.29□□□□□ -0.6
PRPF40B-201ENST00000261897 CFAP46Q8IYW2 2715 aa11.29□□□□□ -0.6
PRPF40B-201ENST00000261897 NIPBLQ6KC79 2804 aaeCLIP11.29□□□□□ -0.6
PRPF40B-201ENST00000261897 OXTP01178 125 aa11.29□□□□□ -0.6
PRPF40B-201ENST00000261897 LINC00269Q8N2A0 174 aa11.28□□□□□ -0.6
PRPF40B-201ENST00000261897 F8WEM9 126 aa11.28□□□□□ -0.6
PRPF40B-201ENST00000261897 DEFB4AO15263 64 aa11.27□□□□□ -0.6
PRPF40B-201ENST00000261897 UCNP55089 124 aa11.27□□□□□ -0.6
PRPF40B-201ENST00000261897 SS18Q15532 418 aa11.27□□□□□ -0.61
PRPF40B-201ENST00000261897 TMEM89A2RUT3 159 aa11.27□□□□□ -0.61
PRPF40B-201ENST00000261897 LRCOL1A6NCL2 159 aa11.26□□□□□ -0.61
PRPF40B-201ENST00000261897 BEAN1Q3B7T3 259 aa11.26□□□□□ -0.61
PRPF40B-201ENST00000261897 ANGP03950 147 aaKnown RBP11.26□□□□□ -0.61
PRPF40B-201ENST00000261897 CCKP06307 115 aa11.26□□□□□ -0.61
PRPF40B-201ENST00000261897 C22orf24Q9Y442 160 aa11.25□□□□□ -0.61
PRPF40B-201ENST00000261897 JMJD7-PLA2G4BH0Y9G9 81 aa11.24□□□□□ -0.61
PRPF40B-201ENST00000261897 IGHV4-28A0A0C4DH34 117 aa11.24□□□□□ -0.61
PRPF40B-201ENST00000261897 APCP25054 2843 aa11.24□□□□□ -0.61
PRPF40B-201ENST00000261897 TMEM256-PLSCR3K7ERE1 68 aa11.24□□□□□ -0.61
PRPF40B-201ENST00000261897 C11orf72Q8NBR9 251 aa11.24□□□□□ -0.61
PRPF40B-201ENST00000261897 IGLV5-45A0A087WSX0 123 aa11.23□□□□□ -0.61
PRPF40B-201ENST00000261897 GYPEP15421 78 aa11.23□□□□□ -0.61
PRPF40B-201ENST00000261897 PRORYQ9H606 182 aa11.23□□□□□ -0.61
PRPF40B-201ENST00000261897 C1orf158Q8N1D5 194 aa11.22□□□□□ -0.61
PRPF40B-201ENST00000261897 Q8N9L7 120 aa11.22□□□□□ -0.61
PRPF40B-201ENST00000261897 IBA57-AS1B1ANH7 110 aa11.21□□□□□ -0.61
PRPF40B-201ENST00000261897 RPS28P62857 69 aaKnown RBP11.21□□□□□ -0.61
PRPF40B-201ENST00000261897 LINC00336Q6ZUF6 198 aa11.21□□□□□ -0.61
PRPF40B-201ENST00000261897 XAGE1AQ9HD64 81 aa11.21□□□□□ -0.61
PRPF40B-201ENST00000261897 Q6ZQY7 126 aa11.21□□□□□ -0.61
PRPF40B-201ENST00000261897 MXRA5Q9NR99 2828 aa11.21□□□□□ -0.62
PRPF40B-201ENST00000261897 NDUFC2O95298 119 aa11.21□□□□□ -0.62
PRPF40B-201ENST00000261897 TRBV6-4A0A1B0GX49 114 aa11.2□□□□□ -0.62
PRPF40B-201ENST00000261897 DEFB114Q30KQ6 69 aa11.2□□□□□ -0.62
PRPF40B-201ENST00000261897 TRAV10A0A0B4J240 114 aa11.2□□□□□ -0.62
PRPF40B-201ENST00000261897 ODF3L2Q3SX64 289 aa11.2□□□□□ -0.62
PRPF40B-201ENST00000261897 ZNF843Q8N446 348 aa11.2□□□□□ -0.62
PRPF40B-201ENST00000261897 DEFB105AQ8NG35 78 aa11.2□□□□□ -0.62
PRPF40B-201ENST00000261897 Q8N814 137 aa11.19□□□□□ -0.62
PRPF40B-201ENST00000261897 CR1P17927 2039 aa11.19□□□□□ -0.62
PRPF40B-201ENST00000261897 TRBV10-1A0A0K0K1A3 114 aa11.19□□□□□ -0.62
PRPF40B-201ENST00000261897 LINC00474Q9P2X8 69 aa11.19□□□□□ -0.62
PRPF40B-201ENST00000261897 LINC01600Q96MT4 127 aa11.18□□□□□ -0.62
PRPF40B-201ENST00000261897 TRBV6-8A0A0A6YYG3 113 aa11.18□□□□□ -0.62
PRPF40B-201ENST00000261897 UNC79Q9P2D8 2635 aa11.18□□□□□ -0.62
PRPF40B-201ENST00000261897 Q8N3U1 123 aa11.17□□□□□ -0.62
PRPF40B-201ENST00000261897 LINC01356Q8N9X3 169 aa11.17□□□□□ -0.62
PRPF40B-201ENST00000261897 LINC00959A0A1B0GUT2 108 aa11.16□□□□□ -0.62
PRPF40B-201ENST00000261897 KLK9Q2XQG4 91 aa11.16□□□□□ -0.62
PRPF40B-201ENST00000261897 PRR4Q16378 134 aa11.16□□□□□ -0.62
PRPF40B-201ENST00000261897 FLNAP21333 2647 aaKnown RBP11.16□□□□□ -0.62
PRPF40B-201ENST00000261897 M0R2N4 97 aa11.15□□□□□ -0.62
PRPF40B-201ENST00000261897 J3QLI3 93 aa11.14□□□□□ -0.63
PRPF40B-201ENST00000261897 IGHV3OR16-9A0A0B4J2B5 98 aa11.14□□□□□ -0.63
PRPF40B-201ENST00000261897 ZNF702PQ9H963 129 aa11.13□□□□□ -0.63
PRPF40B-201ENST00000261897 C3orf84H3BNL1 204 aa11.12□□□□□ -0.63
PRPF40B-201ENST00000261897 CCL24O00175 119 aa11.12□□□□□ -0.63
PRPF40B-201ENST00000261897 LINC01547P58512 204 aaPredicted RBP11.12□□□□□ -0.63
PRPF40B-201ENST00000261897 Q5XG85 94 aa11.12□□□□□ -0.63
PRPF40B-201ENST00000261897 BSNQ9UPA5 3926 aa11.11□□□□□ -0.63
PRPF40B-201ENST00000261897 C6orf223Q8N319 242 aa11.11□□□□□ -0.63
PRPF40B-201ENST00000261897 SETXQ7Z333 2677 aaKnown RBP11.11□□□□□ -0.63
PRPF40B-201ENST00000261897 VPS13CQ709C8 3753 aa11.11□□□□□ -0.63
PRPF40B-201ENST00000261897 Q6ZVQ6 151 aa11.11□□□□□ -0.63
PRPF40B-201ENST00000261897 TM2D3Q9BRN9 247 aa11.11□□□□□ -0.63
PRPF40B-201ENST00000261897 A0A087WZ39 114 aa11.1□□□□□ -0.63
PRPF40B-201ENST00000261897 CELA1Q9UNI1 258 aa11.1□□□□□ -0.63
PRPF40B-201ENST00000261897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.1□□□□□ -0.63
PRPF40B-201ENST00000261897 SERP1Q9Y6X1 66 aa11.09□□□□□ -0.63
PRPF40B-201ENST00000261897 UNQ6190/PRO20217Q6UXQ8 127 aa11.09□□□□□ -0.63
PRPF40B-201ENST00000261897 TRAV7A0A075B6U4 112 aa11.09□□□□□ -0.63
PRPF40B-201ENST00000261897 ATP5EP2Q5VTU8 51 aa11.08□□□□□ -0.64
PRPF40B-201ENST00000261897 CHCHD10Q8WYQ3 142 aaPredicted RBP11.08□□□□□ -0.64
PRPF40B-201ENST00000261897 BBC3Q96PG8 261 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-201ENST00000261897 SPAG11BQ08648 103 aa11.07□□□□□ -0.64
PRPF40B-201ENST00000261897 TRBV7-6A0A0J9YX20 115 aa11.07□□□□□ -0.64
PRPF40B-201ENST00000261897 C16orf74Q96GX8 76 aa11.07□□□□□ -0.64
PRPF40B-201ENST00000261897 PRO0628Q9UI54 55 aa11.06□□□□□ -0.64
PRPF40B-201ENST00000261897 KLK12Q9UKR0 248 aa11.06□□□□□ -0.64
PRPF40B-201ENST00000261897 USP24Q9UPU5 2620 aa11.05□□□□□ -0.64
PRPF40B-201ENST00000261897 SMIM26A0A096LP01 95 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms