RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 Q6Q795 121 aa8.63□□□□□ -1.03
COL8A1-201ENST00000261037 X6R8D5 127 aa8.63□□□□□ -1.03
COL8A1-201ENST00000261037 IMUPQ9GZP8 106 aa8.62□□□□□ -1.03
COL8A1-201ENST00000261037 Q9BRP9 147 aa8.62□□□□□ -1.03
COL8A1-201ENST00000261037 LINC00208Q96KT6 92 aa8.61□□□□□ -1.03
COL8A1-201ENST00000261037 GOLGB1Q14789 3259 aaKnown RBP8.61□□□□□ -1.03
COL8A1-201ENST00000261037 A8MTW9 85 aa8.61□□□□□ -1.03
COL8A1-201ENST00000261037 PCOTHQ58A44 107 aa8.6□□□□□ -1.03
COL8A1-201ENST00000261037 C16orf95Q9H693 158 aa8.6□□□□□ -1.03
COL8A1-201ENST00000261037 SOSTDC1Q6X4U4 206 aa8.6□□□□□ -1.03
COL8A1-201ENST00000261037 ARHGAP32A7KAX9 2087 aa8.6□□□□□ -1.03
COL8A1-201ENST00000261037 LYPD5Q6UWN5 251 aa8.59□□□□□ -1.03
COL8A1-201ENST00000261037 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.04
COL8A1-201ENST00000261037 SPINK1P00995 79 aa8.58□□□□□ -1.04
COL8A1-201ENST00000261037 MUC7Q8TAX7 377 aa8.58□□□□□ -1.04
COL8A1-201ENST00000261037 CPAMD8Q8IZJ3 1885 aa8.58□□□□□ -1.04
COL8A1-201ENST00000261037 PIEZO2Q9H5I5 2752 aa8.58□□□□□ -1.04
COL8A1-201ENST00000261037 AMELXQ99217 191 aa8.57□□□□□ -1.04
COL8A1-201ENST00000261037 LINC00575Q6W349 94 aa8.57□□□□□ -1.04
COL8A1-201ENST00000261037 PLXNB1O43157 2135 aa8.57□□□□□ -1.04
COL8A1-201ENST00000261037 EXPH5Q8NEV8 1989 aa8.57□□□□□ -1.04
COL8A1-201ENST00000261037 WNK1Q9H4A3 2382 aa8.57□□□□□ -1.04
COL8A1-201ENST00000261037 C1orf134Q5TEV5 83 aa8.56□□□□□ -1.04
COL8A1-201ENST00000261037 NAV2Q8IVL1 2488 aa8.56□□□□□ -1.04
COL8A1-201ENST00000261037 PRLHP81277 87 aa8.56□□□□□ -1.04
COL8A1-201ENST00000261037 TRBV7-6A0A0J9YX20 115 aa8.55□□□□□ -1.04
COL8A1-201ENST00000261037 Q6ZRU5 148 aa8.55□□□□□ -1.04
COL8A1-201ENST00000261037 A0A087WSZ3 146 aa8.55□□□□□ -1.04
COL8A1-201ENST00000261037 SBSPONQ8IVN8 264 aa8.55□□□□□ -1.04
COL8A1-201ENST00000261037 TRAV7A0A075B6U4 112 aa8.55□□□□□ -1.04
COL8A1-201ENST00000261037 ADAMTS20P59510 1910 aa8.54□□□□□ -1.04
COL8A1-201ENST00000261037 EML5Q05BV3 1969 aa8.54□□□□□ -1.04
COL8A1-201ENST00000261037 A0A096LNJ9 63 aa8.54□□□□□ -1.04
COL8A1-201ENST00000261037 PRYO14603 147 aa8.54□□□□□ -1.04
COL8A1-201ENST00000261037 BEAN1Q3B7T3 259 aa8.53□□□□□ -1.04
COL8A1-201ENST00000261037 COL4A2P08572 1712 aa8.53□□□□□ -1.04
COL8A1-201ENST00000261037 NAV3Q8IVL0 2385 aa8.52□□□□□ -1.05
COL8A1-201ENST00000261037 Q8N3U1 123 aa8.52□□□□□ -1.05
COL8A1-201ENST00000261037 CSDC2Q9Y534 153 aaKnown RBP8.51□□□□□ -1.05
COL8A1-201ENST00000261037 H0Y9P7 68 aa8.51□□□□□ -1.05
COL8A1-201ENST00000261037 TLN1Q9Y490 2541 aaKnown RBP8.51□□□□□ -1.05
COL8A1-201ENST00000261037 PRRC2AP48634 2157 aaKnown RBP8.51□□□□□ -1.05
COL8A1-201ENST00000261037 WDR87Q6ZQQ6 2873 aa8.5□□□□□ -1.05
COL8A1-201ENST00000261037 CCDC168Q8NDH2 2452 aa8.49□□□□□ -1.05
COL8A1-201ENST00000261037 PSPHP1O15172 72 aa8.49□□□□□ -1.05
COL8A1-201ENST00000261037 C2orf48Q96LS8 159 aa8.49□□□□□ -1.05
COL8A1-201ENST00000261037 HIVEP3Q5T1R4 2406 aa8.49□□□□□ -1.05
COL8A1-201ENST00000261037 A0A1B0GUV1 79 aa8.49□□□□□ -1.05
COL8A1-201ENST00000261037 C1orf195Q5TG92 126 aa8.49□□□□□ -1.05
COL8A1-201ENST00000261037 HCG22E2RYF7 251 aa8.49□□□□□ -1.05
COL8A1-201ENST00000261037 SONP18583 2426 aaKnown RBP8.48□□□□□ -1.05
COL8A1-201ENST00000261037 C22orf24Q9Y442 160 aa8.48□□□□□ -1.05
COL8A1-201ENST00000261037 TRBV7-7A0A0K0K1E9 115 aa8.48□□□□□ -1.05
COL8A1-201ENST00000261037 FHL3Q13643 280 aa8.48□□□□□ -1.05
COL8A1-201ENST00000261037 SMIM26A0A096LP01 95 aa8.48□□□□□ -1.05
COL8A1-201ENST00000261037 COX8CQ7Z4L0 72 aa8.48□□□□□ -1.05
COL8A1-201ENST00000261037 SMCR5Q8TEV8 140 aa8.47□□□□□ -1.05
COL8A1-201ENST00000261037 SORL1Q92673 2214 aa8.47□□□□□ -1.05
COL8A1-201ENST00000261037 LINC00337Q8N6G1 96 aa8.47□□□□□ -1.05
COL8A1-201ENST00000261037 CRYGAP11844 174 aa8.46□□□□□ -1.06
COL8A1-201ENST00000261037 Q9UF83 564 aa8.46□□□□□ -1.06
COL8A1-201ENST00000261037 LINC00846Q9NV44 126 aa8.45□□□□□ -1.06
COL8A1-201ENST00000261037 FSHBP01225 129 aa8.45□□□□□ -1.06
COL8A1-201ENST00000261037 C11orf72Q8NBR9 251 aa8.44□□□□□ -1.06
COL8A1-201ENST00000261037 MDFIQ99750 246 aa8.44□□□□□ -1.06
COL8A1-201ENST00000261037 F8WDY8 70 aa8.44□□□□□ -1.06
COL8A1-201ENST00000261037 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
COL8A1-201ENST00000261037 PMAIP1Q13794 54 aa8.43□□□□□ -1.06
COL8A1-201ENST00000261037 IGKV2D-30A0A075B6S6 120 aa8.42□□□□□ -1.06
COL8A1-201ENST00000261037 IGKV2-30P06310 120 aa8.42□□□□□ -1.06
COL8A1-201ENST00000261037 SMIM29Q86T20 159 aa8.41□□□□□ -1.06
COL8A1-201ENST00000261037 KIF25-AS1Q9Y6Z4 181 aa8.41□□□□□ -1.06
COL8A1-201ENST00000261037 LINC01561Q8N1V8 128 aa8.4□□□□□ -1.06
COL8A1-201ENST00000261037 LIMD2Q9BT23 127 aa8.4□□□□□ -1.06
COL8A1-201ENST00000261037 SPACA4Q8TDM5 124 aa8.4□□□□□ -1.07
COL8A1-201ENST00000261037 TMEM254Q8TBM7 123 aa8.39□□□□□ -1.07
COL8A1-201ENST00000261037 AGRNO00468 2067 aa8.39□□□□□ -1.07
COL8A1-201ENST00000261037 MOBPQ13875 183 aa8.39□□□□□ -1.07
COL8A1-201ENST00000261037 C7orf65Q6ZTY9 151 aa8.39□□□□□ -1.07
COL8A1-201ENST00000261037 C1orf64Q8NEQ6 169 aa8.38□□□□□ -1.07
COL8A1-201ENST00000261037 C6orf48Q9UBA6 75 aa8.38□□□□□ -1.07
COL8A1-201ENST00000261037 LINC00167Q96N53 147 aa8.38□□□□□ -1.07
COL8A1-201ENST00000261037 CENPFP49454 3210 aa8.38□□□□□ -1.07
COL8A1-201ENST00000261037 Q8N2B8 174 aa8.37□□□□□ -1.07
COL8A1-201ENST00000261037 CHTF8P0CG12 524 aa8.37□□□□□ -1.07
COL8A1-201ENST00000261037 NHLRC4P0CG21 123 aaPredicted RBP8.37□□□□□ -1.07
COL8A1-201ENST00000261037 SPATA3Q8NHX4 192 aa8.36□□□□□ -1.07
COL8A1-201ENST00000261037 ANKRD11Q6UB99 2663 aaPredicted RBP8.36□□□□□ -1.07
COL8A1-201ENST00000261037 CEP295Q9C0D2 2601 aa8.36□□□□□ -1.07
COL8A1-201ENST00000261037 PHF5AQ7RTV0 110 aaKnown RBP8.36□□□□□ -1.07
COL8A1-201ENST00000261037 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
COL8A1-201ENST00000261037 ABCA2Q9BZC7 2435 aa8.34□□□□□ -1.07
COL8A1-201ENST00000261037 FAM19A4Q96LR4 140 aa8.34□□□□□ -1.07
COL8A1-201ENST00000261037 LINC00315P59091 139 aa8.33□□□□□ -1.08
COL8A1-201ENST00000261037 LINC01546A6NGU7 62 aa8.33□□□□□ -1.08
COL8A1-201ENST00000261037 FAM218AQ96MZ4 157 aa8.33□□□□□ -1.08
COL8A1-201ENST00000261037 IGHV3OR16-9A0A0B4J2B5 98 aa8.33□□□□□ -1.08
COL8A1-201ENST00000261037 CXCL6P80162 114 aa8.32□□□□□ -1.08
COL8A1-201ENST00000261037 TET2Q6N021 2002 aaPredicted RBP8.32□□□□□ -1.08
COL8A1-201ENST00000261037 MYO18BQ8IUG5 2567 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms