RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SMIM1B2RUZ4 78 aa10.4□□□□□ -0.74
CCDC90B-201ENST00000260054 SPINK8P0C7L1 97 aa10.4□□□□□ -0.74
CCDC90B-201ENST00000260054 RNF151Q2KHN1 245 aa10.4□□□□□ -0.74
CCDC90B-201ENST00000260054 BOD1L2Q8IYS8 172 aa10.4□□□□□ -0.74
CCDC90B-201ENST00000260054 A0A087WTM6 91 aa10.39□□□□□ -0.75
CCDC90B-201ENST00000260054 HSD52Q0P140 79 aa10.39□□□□□ -0.75
CCDC90B-201ENST00000260054 GTF2H5Q6ZYL4 71 aa10.39□□□□□ -0.75
CCDC90B-201ENST00000260054 LINC01561Q8N1V8 128 aa10.39□□□□□ -0.75
CCDC90B-201ENST00000260054 IGHV3-64A0A075B6Q5 118 aa10.38□□□□□ -0.75
CCDC90B-201ENST00000260054 IGHV1-58A0A0C4DH39 117 aa10.38□□□□□ -0.75
CCDC90B-201ENST00000260054 TMEM223A0PJW6 202 aa10.38□□□□□ -0.75
CCDC90B-201ENST00000260054 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
CCDC90B-201ENST00000260054 APOMO95445 188 aa10.38□□□□□ -0.75
CCDC90B-201ENST00000260054 HIGD2BQ4VC39 106 aa10.38□□□□□ -0.75
CCDC90B-201ENST00000260054 CFAP161Q6P656 301 aa10.38□□□□□ -0.75
CCDC90B-201ENST00000260054 VPS25Q9BRG1 176 aa10.38□□□□□ -0.75
CCDC90B-201ENST00000260054 FAT2Q9NYQ8 4349 aa10.37□□□□□ -0.75
CCDC90B-201ENST00000260054 GVQW2A0A096LPI5 108 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-201ENST00000260054 GAGE10A6NGK3 116 aa10.36□□□□□ -0.75
CCDC90B-201ENST00000260054 LINC00526Q96FQ7 95 aa10.36□□□□□ -0.75
CCDC90B-201ENST00000260054 IGLV5-39A0A0G2JS06 123 aa10.35□□□□□ -0.75
CCDC90B-201ENST00000260054 K7EP34 96 aa10.34□□□□□ -0.75
CCDC90B-201ENST00000260054 SPAG11BQ08648 103 aa10.34□□□□□ -0.75
CCDC90B-201ENST00000260054 KIAA0087Q14695 138 aa10.34□□□□□ -0.75
CCDC90B-201ENST00000260054 LINC00336Q6ZUF6 198 aa10.34□□□□□ -0.75
CCDC90B-201ENST00000260054 Q8N814 137 aa10.34□□□□□ -0.75
CCDC90B-201ENST00000260054 TOMM7Q9P0U1 55 aa10.34□□□□□ -0.75
CCDC90B-201ENST00000260054 C14orf177Q52M58 125 aa10.33□□□□□ -0.76
CCDC90B-201ENST00000260054 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.32□□□□□ -0.76
CCDC90B-201ENST00000260054 ZNF561-AS1K7EIQ3 104 aa10.32□□□□□ -0.76
CCDC90B-201ENST00000260054 Q8IZM0 81 aa10.32□□□□□ -0.76
CCDC90B-201ENST00000260054 SLPIP03973 132 aa10.31□□□□□ -0.76
CCDC90B-201ENST00000260054 COX7B2Q8TF08 81 aa10.31□□□□□ -0.76
CCDC90B-201ENST00000260054 NTN5Q8WTR8 489 aaPredicted RBP10.31□□□□□ -0.76
CCDC90B-201ENST00000260054 HIGD1BQ9P298 99 aa10.31□□□□□ -0.76
CCDC90B-201ENST00000260054 PRSS2P07478 247 aa10.31□□□□□ -0.76
CCDC90B-201ENST00000260054 HERVK_113P61574 105 aa10.31□□□□□ -0.76
CCDC90B-201ENST00000260054 DNAH11Q96DT5 4516 aa10.3□□□□□ -0.76
CCDC90B-201ENST00000260054 C6orf226Q5I0X4 101 aa10.3□□□□□ -0.76
CCDC90B-201ENST00000260054 E9PLD3 99 aa10.29□□□□□ -0.76
CCDC90B-201ENST00000260054 H3BUT2 72 aa10.29□□□□□ -0.76
CCDC90B-201ENST00000260054 FUSP35637 526 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC90B-201ENST00000260054 TSPEAR-AS2P59090 65 aa10.29□□□□□ -0.76
CCDC90B-201ENST00000260054 C2orf82Q6UX34 121 aa10.29□□□□□ -0.76
CCDC90B-201ENST00000260054 LEPROTO15243 131 aa10.28□□□□□ -0.76
CCDC90B-201ENST00000260054 C2orf48Q96LS8 159 aa10.28□□□□□ -0.76
CCDC90B-201ENST00000260054 CAMK2N2Q96S95 79 aa10.28□□□□□ -0.76
CCDC90B-201ENST00000260054 IGKV2D-26A0A0A0MRZ7 120 aa10.28□□□□□ -0.76
CCDC90B-201ENST00000260054 A0A1W2PPM0 123 aa10.28□□□□□ -0.76
CCDC90B-201ENST00000260054 KRTAP10-2P60368 255 aa10.28□□□□□ -0.76
CCDC90B-201ENST00000260054 C10orf25Q5T742 122 aa10.28□□□□□ -0.76
CCDC90B-201ENST00000260054 A0A1B0GVY2 172 aa10.27□□□□□ -0.77
CCDC90B-201ENST00000260054 CNBPP62633 177 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-201ENST00000260054 UNQ6190/PRO20217Q6UXQ8 127 aa10.27□□□□□ -0.77
CCDC90B-201ENST00000260054 Q6ZRU5 148 aa10.27□□□□□ -0.77
CCDC90B-201ENST00000260054 PLEKHB2Q96CS7 222 aa10.27□□□□□ -0.77
CCDC90B-201ENST00000260054 PKD1P98161 4303 aa10.26□□□□□ -0.77
CCDC90B-201ENST00000260054 J3QQQ9 107 aa10.26□□□□□ -0.77
CCDC90B-201ENST00000260054 NDUFA1O15239 70 aa10.26□□□□□ -0.77
CCDC90B-201ENST00000260054 SMIM13P0DJ93 91 aa10.26□□□□□ -0.77
CCDC90B-201ENST00000260054 NMUP48645 174 aa10.26□□□□□ -0.77
CCDC90B-201ENST00000260054 CKS1BP61024 79 aa10.26□□□□□ -0.77
CCDC90B-201ENST00000260054 SYCNQ0VAF6 134 aa10.26□□□□□ -0.77
CCDC90B-201ENST00000260054 FABP2P12104 132 aa10.25□□□□□ -0.77
CCDC90B-201ENST00000260054 CXCL5P42830 114 aa10.25□□□□□ -0.77
CCDC90B-201ENST00000260054 PCP2Q8IVA1 136 aa10.25□□□□□ -0.77
CCDC90B-201ENST00000260054 SPCS1Q9Y6A9 102 aa10.25□□□□□ -0.77
CCDC90B-201ENST00000260054 F8WDY8 70 aa10.25□□□□□ -0.77
CCDC90B-201ENST00000260054 ZNF625Q96I27 306 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-201ENST00000260054 CARD19Q96LW7 228 aa10.25□□□□□ -0.77
CCDC90B-201ENST00000260054 LGALS3P17931 250 aaKnown RBP10.24□□□□□ -0.77
CCDC90B-201ENST00000260054 TTTY13Q9BZ97 58 aa10.24□□□□□ -0.77
CCDC90B-201ENST00000260054 C6orf48Q9UBA6 75 aa10.24□□□□□ -0.77
CCDC90B-201ENST00000260054 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
CCDC90B-201ENST00000260054 IGLV5-52A0A0A0MRZ9 124 aa10.23□□□□□ -0.77
CCDC90B-201ENST00000260054 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.23□□□□□ -0.77
CCDC90B-201ENST00000260054 NDUFA12Q9UI09 145 aa10.23□□□□□ -0.77
CCDC90B-201ENST00000260054 TAL2Q16559 108 aa10.22□□□□□ -0.77
CCDC90B-201ENST00000260054 LINC01620Q4KN68 170 aa10.22□□□□□ -0.77
CCDC90B-201ENST00000260054 C9orf116Q5BN46 136 aaPredicted RBP10.22□□□□□ -0.77
CCDC90B-201ENST00000260054 C9orf163Q8N9P6 203 aa10.22□□□□□ -0.77
CCDC90B-201ENST00000260054 RAB37Q96AX2 223 aa10.22□□□□□ -0.77
CCDC90B-201ENST00000260054 PGPEP1Q9NXJ5 209 aa10.22□□□□□ -0.77
CCDC90B-201ENST00000260054 TRBV30A0A0K0K1B3 111 aa10.21□□□□□ -0.78
CCDC90B-201ENST00000260054 DNAH5Q8TE73 4624 aa10.21□□□□□ -0.78
CCDC90B-201ENST00000260054 MYMXA0A1B0GTQ4 84 aa10.19□□□□□ -0.78
CCDC90B-201ENST00000260054 GCSHP23434 173 aa10.19□□□□□ -0.78
CCDC90B-201ENST00000260054 SFTA2Q6UW10 78 aa10.19□□□□□ -0.78
CCDC90B-201ENST00000260054 FXYD2P54710 66 aa10.18□□□□□ -0.78
CCDC90B-201ENST00000260054 CEND1Q8N111 149 aa10.18□□□□□ -0.78
CCDC90B-201ENST00000260054 NAA38Q9BRA0 125 aaKnown RBP10.18□□□□□ -0.78
CCDC90B-201ENST00000260054 PKHD1P08F94 4074 aa10.18□□□□□ -0.78
CCDC90B-201ENST00000260054 ZNF815PA8K554 130 aa10.18□□□□□ -0.78
CCDC90B-201ENST00000260054 TMEM238C9JI98 176 aa10.17□□□□□ -0.78
CCDC90B-201ENST00000260054 HERV-K104P63124 156 aa10.17□□□□□ -0.78
CCDC90B-201ENST00000260054 SDIM1Q6ZPB5 146 aa10.16□□□□□ -0.78
CCDC90B-201ENST00000260054 ERG28Q9UKR5 140 aa10.16□□□□□ -0.78
CCDC90B-201ENST00000260054 SCGB1A1P11684 91 aa10.15□□□□□ -0.78
CCDC90B-201ENST00000260054 A0A0J9YXY3 114 aa10.15□□□□□ -0.79
CCDC90B-201ENST00000260054 F8W1H4 67 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms