RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 NTN5Q8WTR8 489 aaPredicted RBP11.69□□□□□ -0.54
CCDC115-201ENST00000259229 TM2D2Q9BX73 214 aa11.69□□□□□ -0.54
CCDC115-201ENST00000259229 DNAH6Q9C0G6 4158 aa11.69□□□□□ -0.54
CCDC115-201ENST00000259229 HERV-K104P63124 156 aa11.68□□□□□ -0.54
CCDC115-201ENST00000259229 WFDC2Q14508 124 aa11.68□□□□□ -0.54
CCDC115-201ENST00000259229 USP17L23D6RBM5 183 aa11.68□□□□□ -0.54
CCDC115-201ENST00000259229 CXCL5P42830 114 aa11.68□□□□□ -0.54
CCDC115-201ENST00000259229 C10orf25Q5T742 122 aa11.68□□□□□ -0.54
CCDC115-201ENST00000259229 CFAP161Q6P656 301 aa11.68□□□□□ -0.54
CCDC115-201ENST00000259229 ADAMTSL4-AS1Q5T5F5 129 aa11.67□□□□□ -0.54
CCDC115-201ENST00000259229 SPANXB1Q9NS25 103 aaPredicted RBP11.67□□□□□ -0.54
CCDC115-201ENST00000259229 TIMM17BO60830 172 aa11.66□□□□□ -0.54
CCDC115-201ENST00000259229 SFTA2Q6UW10 78 aa11.66□□□□□ -0.54
CCDC115-201ENST00000259229 CKS1BP61024 79 aa11.65□□□□□ -0.54
CCDC115-201ENST00000259229 UNQ6190/PRO20217Q6UXQ8 127 aa11.65□□□□□ -0.54
CCDC115-201ENST00000259229 LECT2O14960 151 aa11.64□□□□□ -0.55
CCDC115-201ENST00000259229 HSD52Q0P140 79 aa11.64□□□□□ -0.55
CCDC115-201ENST00000259229 ZNF561-AS1K7EIQ3 104 aa11.64□□□□□ -0.55
CCDC115-201ENST00000259229 C2orf48Q96LS8 159 aa11.64□□□□□ -0.55
CCDC115-201ENST00000259229 KMT2CQ8NEZ4 4911 aaKnown RBP11.63□□□□□ -0.55
CCDC115-201ENST00000259229 DNAH2Q9P225 4427 aa11.63□□□□□ -0.55
CCDC115-201ENST00000259229 TMEM238C9JI98 176 aa11.63□□□□□ -0.55
CCDC115-201ENST00000259229 SMIM13P0DJ93 91 aa11.63□□□□□ -0.55
CCDC115-201ENST00000259229 SPANXDQ9BXN6 97 aa11.63□□□□□ -0.55
CCDC115-201ENST00000259229 SPANXCQ9NY87 97 aa11.63□□□□□ -0.55
CCDC115-201ENST00000259229 LRCOL1A6NCL2 159 aa11.62□□□□□ -0.55
CCDC115-201ENST00000259229 SLPIP03973 132 aa11.62□□□□□ -0.55
CCDC115-201ENST00000259229 TAL2Q16559 108 aa11.62□□□□□ -0.55
CCDC115-201ENST00000259229 MEIG1Q5JSS6 88 aa11.62□□□□□ -0.55
CCDC115-201ENST00000259229 C6orf48Q9UBA6 75 aa11.62□□□□□ -0.55
CCDC115-201ENST00000259229 ERG28Q9UKR5 140 aa11.62□□□□□ -0.55
CCDC115-201ENST00000259229 A0A0U1RRA0 63 aa11.61□□□□□ -0.55
CCDC115-201ENST00000259229 PSCAO43653 123 aa11.61□□□□□ -0.55
CCDC115-201ENST00000259229 C9orf116Q5BN46 136 aaPredicted RBP11.61□□□□□ -0.55
CCDC115-201ENST00000259229 BVES-AS1Q5T3Y7 98 aa11.61□□□□□ -0.55
CCDC115-201ENST00000259229 Q6ZRU5 148 aa11.61□□□□□ -0.55
CCDC115-201ENST00000259229 DAND5Q8N907 189 aa11.61□□□□□ -0.55
CCDC115-201ENST00000259229 HIST1H4GQ99525 98 aa11.61□□□□□ -0.55
CCDC115-201ENST00000259229 EREGO14944 169 aa11.6□□□□□ -0.55
CCDC115-201ENST00000259229 HINT1P49773 126 aaPredicted RBP11.6□□□□□ -0.55
CCDC115-201ENST00000259229 CAMK2N2Q96S95 79 aa11.6□□□□□ -0.55
CCDC115-201ENST00000259229 SNHG12Q9BXW3 62 aa11.6□□□□□ -0.55
CCDC115-201ENST00000259229 EIF4EBP3O60516 100 aaPredicted RBP11.6□□□□□ -0.55
CCDC115-201ENST00000259229 CEND1Q8N111 149 aa11.6□□□□□ -0.55
CCDC115-201ENST00000259229 F8WDY8 70 aa11.59□□□□□ -0.55
CCDC115-201ENST00000259229 FXYD2P54710 66 aa11.59□□□□□ -0.55
CCDC115-201ENST00000259229 SRSF9Q13242 221 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC115-201ENST00000259229 PFN2P35080 140 aa11.58□□□□□ -0.56
CCDC115-201ENST00000259229 CIRBPQ14011 172 aaKnown RBP11.58□□□□□ -0.56
CCDC115-201ENST00000259229 HYDINQ4G0P3 5121 aa11.57□□□□□ -0.56
CCDC115-201ENST00000259229 TRBV30A0A0K0K1B3 111 aa11.57□□□□□ -0.56
CCDC115-201ENST00000259229 GCSHP23434 173 aa11.57□□□□□ -0.56
CCDC115-201ENST00000259229 SOSTDC1Q6X4U4 206 aa11.57□□□□□ -0.56
CCDC115-201ENST00000259229 MIR7-3HGQ8N6C7 128 aa11.57□□□□□ -0.56
CCDC115-201ENST00000259229 SYCNQ0VAF6 134 aa11.57□□□□□ -0.56
CCDC115-201ENST00000259229 Q6ZVH6 145 aa11.57□□□□□ -0.56
CCDC115-201ENST00000259229 M0R143 59 aa11.56□□□□□ -0.56
CCDC115-201ENST00000259229 PTTG1IPP53801 180 aa11.56□□□□□ -0.56
CCDC115-201ENST00000259229 LINC00158P58513 81 aa11.56□□□□□ -0.56
CCDC115-201ENST00000259229 COX17Q14061 63 aa11.56□□□□□ -0.56
CCDC115-201ENST00000259229 C1orf134Q5TEV5 83 aa11.56□□□□□ -0.56
CCDC115-201ENST00000259229 MUSTN1Q8IVN3 82 aa11.56□□□□□ -0.56
CCDC115-201ENST00000259229 SACSQ9NZJ4 4579 aa11.55□□□□□ -0.56
CCDC115-201ENST00000259229 NPC2P61916 151 aa11.55□□□□□ -0.56
CCDC115-201ENST00000259229 LINC00308Q8TCZ7 52 aa11.55□□□□□ -0.56
CCDC115-201ENST00000259229 LCE6AA0A183 80 aa11.54□□□□□ -0.56
CCDC115-201ENST00000259229 CARD19Q96LW7 228 aa11.54□□□□□ -0.56
CCDC115-201ENST00000259229 BATFQ16520 125 aa11.53□□□□□ -0.56
CCDC115-201ENST00000259229 A0A087WTM6 91 aa11.53□□□□□ -0.56
CCDC115-201ENST00000259229 IFITM1P13164 125 aa11.53□□□□□ -0.56
CCDC115-201ENST00000259229 CNBPP62633 177 aaKnown RBP11.53□□□□□ -0.56
CCDC115-201ENST00000259229 RNF151Q2KHN1 245 aa11.52□□□□□ -0.57
CCDC115-201ENST00000259229 C14orf177Q52M58 125 aa11.52□□□□□ -0.57
CCDC115-201ENST00000259229 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.57
CCDC115-201ENST00000259229 DNAH17Q9UFH2 4485 aa11.52□□□□□ -0.57
CCDC115-201ENST00000259229 A4D1N5 150 aa11.5□□□□□ -0.57
CCDC115-201ENST00000259229 RTL8CO15255 209 aa11.5□□□□□ -0.57
CCDC115-201ENST00000259229 Q8N814 137 aa11.5□□□□□ -0.57
CCDC115-201ENST00000259229 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.49□□□□□ -0.57
CCDC115-201ENST00000259229 LOC107984156A0A0G2JMH3 177 aa11.49□□□□□ -0.57
CCDC115-201ENST00000259229 ARL17AQ8IVW1 177 aa11.49□□□□□ -0.57
CCDC115-201ENST00000259229 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
CCDC115-201ENST00000259229 FRAS1Q86XX4 4008 aa11.49□□□□□ -0.57
CCDC115-201ENST00000259229 RYR3Q15413 4870 aa11.49□□□□□ -0.57
CCDC115-201ENST00000259229 A0A1B0GWB2 263 aa11.48□□□□□ -0.57
CCDC115-201ENST00000259229 NDUFC2-KCTD14E9PQ53 114 aa11.48□□□□□ -0.57
CCDC115-201ENST00000259229 TLX1NBP0CAT3 122 aa11.48□□□□□ -0.57
CCDC115-201ENST00000259229 RPL24P83731 157 aaKnown RBP11.48□□□□□ -0.57
CCDC115-201ENST00000259229 Q6ZRP5 223 aa11.48□□□□□ -0.57
CCDC115-201ENST00000259229 Q8NDZ9 215 aa11.47□□□□□ -0.57
CCDC115-201ENST00000259229 NHP2Q9NX24 153 aaKnown RBP11.47□□□□□ -0.57
CCDC115-201ENST00000259229 K7ERJ3 54 aa11.46□□□□□ -0.57
CCDC115-201ENST00000259229 TNP2Q05952 138 aa11.46□□□□□ -0.57
CCDC115-201ENST00000259229 CFC1BP0CG36 223 aa11.46□□□□□ -0.58
CCDC115-201ENST00000259229 CFC1P0CG37 223 aa11.46□□□□□ -0.58
CCDC115-201ENST00000259229 TMEM238LA0A1B0GVL6 79 aa11.45□□□□□ -0.58
CCDC115-201ENST00000259229 A6NJY4 79 aa11.45□□□□□ -0.58
CCDC115-201ENST00000259229 COPS9Q8WXC6 57 aa11.44□□□□□ -0.58
CCDC115-201ENST00000259229 XAGE1AQ9HD64 81 aa11.44□□□□□ -0.58
CCDC115-201ENST00000259229 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms