RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 A0A1B0GUT8 65 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 GRIFINA4D1Z8 144 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 C19orf71A6NCJ1 209 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 NUPR1O60356 82 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 ZNF705DP0CH99 300 aaPredicted RBP2.59□□□□□ -1.99
TRA2B-201ENST00000259043 ZNF705BP0CI00 300 aaPredicted RBP2.59□□□□□ -1.99
TRA2B-201ENST00000259043 GZMBP10144 247 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 RNASE4P34096 147 aaKnown RBP2.59□□□□□ -1.99
TRA2B-201ENST00000259043 FUSP35637 526 aaKnown RBP eCLIP2.59□□□□□ -1.99
TRA2B-201ENST00000259043 RASL11AQ6T310 242 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 SPINT4Q6UDR6 99 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 TMEM136Q6ZRR5 245 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 ATP5L2Q7Z4Y8 100 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 DAZ4Q86SG3 579 aaKnown RBP2.59□□□□□ -1.99
TRA2B-201ENST00000259043 FER1L6-AS1Q8NA97 138 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 NUP35Q8NFH5 326 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 LINC01587Q99440 93 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 GNB1LQ9BYB4 327 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 AGPAT4-IT1Q9H0P7 198 aa2.59□□□□□ -1.99
TRA2B-201ENST00000259043 ZNF706Q9Y5V0 76 aaPredicted RBP2.59□□□□□ -1.99
TRA2B-201ENST00000259043 MUC21A0A0G2JKD1 596 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 MUC21A0A140T8X8 626 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 F2Z2F3 143 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 K7ERS5 55 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 SRIP30626 198 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 ASIPP42127 132 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 PKIAP61925 76 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 LRP2P98164 4655 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 Q0VG73 95 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 GDF5OSQ5U4N7 250 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 SPANXN1Q5VSR9 72 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 LYZL1Q6UWQ5 148 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 GATD1Q8NB37 220 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 ZNRF2Q8NHG8 242 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 LENEPQ9Y5L5 61 aa2.58□□□□□ -2
TRA2B-201ENST00000259043 LRP1Q07954 4544 aaKnown RBP2.58□□□□□ -2
TRA2B-201ENST00000259043 TRAV2A0A0B4J234 112 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 C7orf71A4D174 169 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 KNCNA6PVL3 124 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 A8MUU9 505 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 SMR3BP02814 79 aaPredicted RBP2.57□□□□□ -2
TRA2B-201ENST00000259043 ARMS2P0C7Q2 107 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 SMIM17P0DL12 118 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 HTN1P15515 57 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 HTN3P15516 51 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 CRIP1P50238 77 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 ZNF80P51504 273 aaPredicted RBP2.57□□□□□ -2
TRA2B-201ENST00000259043 DEFB131AP59861 70 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 FOXI2Q6ZQN5 318 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 C15orf53Q8NAA6 179 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 DCANP1Q8TF63 244 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 C14orf144Q96I85 54 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 TMEM208Q9BTX3 173 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 PHLDA3Q9Y5J5 127 aa2.57□□□□□ -2
TRA2B-201ENST00000259043 TRAV12-2A0A075B6T6 113 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 TRAV12-3A0A0B4J271 114 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 A0A0J9YX75 114 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 H3BVH4 76 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 M0R2Z0 102 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 M0R381 172 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 MGPP08493 103 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 SPART-AS1P0CW21 52 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 DDTP30046 118 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 CKS2P33552 79 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 FOXA3P55318 350 aaPredicted RBP2.56□□□□□ -2
TRA2B-201ENST00000259043 FXYD7P58549 80 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 DEFB1P60022 68 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 SPINK13Q1W4C9 94 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 NIT1Q86X76 327 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 AMN1Q8IY45 258 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 ZNF664Q8N3J9 261 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 C18orf32Q8TCD1 76 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 RMI2Q96E14 147 aa2.56□□□□□ -2
TRA2B-201ENST00000259043 SPANXB1Q9NS25 103 aaPredicted RBP2.56□□□□□ -2
TRA2B-201ENST00000259043 C20orf202A1L168 122 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 D6R8Y8 96 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 TSTD3H0UI37 97 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 HLA-DRB4P13762 266 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 EMP1P54849 157 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 KRTDAPP60985 99 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 HAMPP81172 84 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 IQCJQ1A5X6 159 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 Q6ZRN7 208 aaPredicted RBP2.55□□□□□ -2
TRA2B-201ENST00000259043 ZFAND2AQ8N6M9 145 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 PRELID3AQ96N28 172 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 AP1S3Q96PC3 154 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 ODF3Q96PU9 254 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 PRO1933Q9H354 126 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 MAP1LC3AQ9H492 121 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 HLA-DRB4X5D2U9 266 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 FAT3Q8TDW7 4589 aa2.55□□□□□ -2
TRA2B-201ENST00000259043 H3BMM0 161 aa2.54□□□□□ -2
TRA2B-201ENST00000259043 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.54□□□□□ -2
TRA2B-201ENST00000259043 GNRH2O43555 120 aa2.54□□□□□ -2
TRA2B-201ENST00000259043 NCR2O95944 276 aa2.54□□□□□ -2
TRA2B-201ENST00000259043 PPBPP02775 128 aa2.54□□□□□ -2
TRA2B-201ENST00000259043 LINC00614P0C842 121 aa2.54□□□□□ -2
TRA2B-201ENST00000259043 IGLC6P0CF74 106 aa2.54□□□□□ -2
TRA2B-201ENST00000259043 CCL18P55774 89 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms