RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 FAM104AQ969W3 186 aa7.98□□□□□ -1.13
LIN28A-201ENST00000254231 PRSS47A8MTI9 375 aa7.98□□□□□ -1.13
LIN28A-201ENST00000254231 HERVK_113P63121 156 aa7.98□□□□□ -1.13
LIN28A-201ENST00000254231 C1orf43Q9BWL3 253 aa7.98□□□□□ -1.13
LIN28A-201ENST00000254231 E9PLD3 99 aa7.98□□□□□ -1.13
LIN28A-201ENST00000254231 MUSTN1Q8IVN3 82 aa7.98□□□□□ -1.13
LIN28A-201ENST00000254231 EIF4EBP3O60516 100 aaPredicted RBP7.97□□□□□ -1.13
LIN28A-201ENST00000254231 PRKDCP78527 4128 aaKnown RBP7.97□□□□□ -1.13
LIN28A-201ENST00000254231 TMEM223A0PJW6 202 aa7.97□□□□□ -1.13
LIN28A-201ENST00000254231 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
LIN28A-201ENST00000254231 C10orf126Q8N4M7 172 aa7.97□□□□□ -1.13
LIN28A-201ENST00000254231 ZNF561-AS1K7EIQ3 104 aa7.96□□□□□ -1.13
LIN28A-201ENST00000254231 COX7A2LO14548 114 aa7.96□□□□□ -1.13
LIN28A-201ENST00000254231 CASC10Q5T4H9 136 aa7.96□□□□□ -1.13
LIN28A-201ENST00000254231 IGHV1-58A0A0C4DH39 117 aa7.95□□□□□ -1.14
LIN28A-201ENST00000254231 A4D1N5 150 aa7.95□□□□□ -1.14
LIN28A-201ENST00000254231 LELP1Q5T871 98 aa7.95□□□□□ -1.14
LIN28A-201ENST00000254231 AMELXQ99217 191 aa7.95□□□□□ -1.14
LIN28A-201ENST00000254231 LINC00588Q9Y4M8 146 aa7.95□□□□□ -1.14
LIN28A-201ENST00000254231 WIPF1O43516 503 aa7.95□□□□□ -1.14
LIN28A-201ENST00000254231 UNQ6190/PRO20217Q6UXQ8 127 aa7.95□□□□□ -1.14
LIN28A-201ENST00000254231 CIRBPQ14011 172 aaKnown RBP7.94□□□□□ -1.14
LIN28A-201ENST00000254231 A0A0J9YXY3 114 aa7.94□□□□□ -1.14
LIN28A-201ENST00000254231 F8W1H4 67 aa7.94□□□□□ -1.14
LIN28A-201ENST00000254231 LYRM7Q5U5X0 104 aa7.94□□□□□ -1.14
LIN28A-201ENST00000254231 MIR7-3HGQ8N6C7 128 aa7.94□□□□□ -1.14
LIN28A-201ENST00000254231 COX7B2Q8TF08 81 aa7.94□□□□□ -1.14
LIN28A-201ENST00000254231 TM2D3Q9BRN9 247 aa7.94□□□□□ -1.14
LIN28A-201ENST00000254231 PYGO1Q9Y3Y4 419 aa7.94□□□□□ -1.14
LIN28A-201ENST00000254231 SMIM1B2RUZ4 78 aa7.94□□□□□ -1.14
LIN28A-201ENST00000254231 RPL32P62910 135 aaKnown RBP7.94□□□□□ -1.14
LIN28A-201ENST00000254231 MRPS36P82909 103 aaKnown RBP7.94□□□□□ -1.14
LIN28A-201ENST00000254231 TINCRA0A1B0GVN0 87 aa7.93□□□□□ -1.14
LIN28A-201ENST00000254231 SPAG11BQ08648 103 aa7.93□□□□□ -1.14
LIN28A-201ENST00000254231 SPANXB1Q9NS25 103 aaPredicted RBP7.93□□□□□ -1.14
LIN28A-201ENST00000254231 GAGE2BQ13066 116 aa7.93□□□□□ -1.14
LIN28A-201ENST00000254231 ERG28Q9UKR5 140 aa7.93□□□□□ -1.14
LIN28A-201ENST00000254231 LEPROTO15243 131 aa7.93□□□□□ -1.14
LIN28A-201ENST00000254231 RPL18AQ02543 176 aaKnown RBP7.93□□□□□ -1.14
LIN28A-201ENST00000254231 HIGD1BQ9P298 99 aa7.92□□□□□ -1.14
LIN28A-201ENST00000254231 C10orf25Q5T742 122 aa7.92□□□□□ -1.14
LIN28A-201ENST00000254231 CAMK2N2Q96S95 79 aa7.91□□□□□ -1.14
LIN28A-201ENST00000254231 TM2D2Q9BX73 214 aa7.91□□□□□ -1.14
LIN28A-201ENST00000254231 ENHOQ6UWT2 76 aa7.91□□□□□ -1.14
LIN28A-201ENST00000254231 LINC01546A6NGU7 62 aa7.91□□□□□ -1.14
LIN28A-201ENST00000254231 TSPAN13O95857 204 aa7.91□□□□□ -1.14
LIN28A-201ENST00000254231 LINC00612Q8N6U2 182 aa7.91□□□□□ -1.14
LIN28A-201ENST00000254231 TRBV20-1A0A075B6N2 111 aa7.9□□□□□ -1.14
LIN28A-201ENST00000254231 NCR3O14931 201 aa7.9□□□□□ -1.14
LIN28A-201ENST00000254231 MT-ATP8P03928 68 aa7.9□□□□□ -1.14
LIN28A-201ENST00000254231 B9D2Q9BPU9 175 aa7.9□□□□□ -1.14
LIN28A-201ENST00000254231 DNAH10OSP0CZ25 163 aa7.9□□□□□ -1.14
LIN28A-201ENST00000254231 NTN5Q8WTR8 489 aaPredicted RBP7.9□□□□□ -1.15
LIN28A-201ENST00000254231 TCL1BO95988 128 aa7.89□□□□□ -1.15
LIN28A-201ENST00000254231 PRO1854Q9UHT4 67 aa7.89□□□□□ -1.15
LIN28A-201ENST00000254231 ANAPC13Q9BS18 74 aa7.89□□□□□ -1.15
LIN28A-201ENST00000254231 IGHV3OR16-9A0A0B4J2B5 98 aa7.88□□□□□ -1.15
LIN28A-201ENST00000254231 FOXI1Q12951 378 aa7.88□□□□□ -1.15
LIN28A-201ENST00000254231 SNCGO76070 127 aa7.88□□□□□ -1.15
LIN28A-201ENST00000254231 ANKRD29Q8N6D5 301 aa7.87□□□□□ -1.15
LIN28A-201ENST00000254231 SLC25A20O43772 301 aa7.87□□□□□ -1.15
LIN28A-201ENST00000254231 TTC32Q5I0X7 151 aa7.87□□□□□ -1.15
LIN28A-201ENST00000254231 TAL2Q16559 108 aa7.87□□□□□ -1.15
LIN28A-201ENST00000254231 COX6CP09669 75 aa7.86□□□□□ -1.15
LIN28A-201ENST00000254231 CD164L2Q6UWJ8 174 aa7.86□□□□□ -1.15
LIN28A-201ENST00000254231 PPDPFLQ8WWR9 84 aa7.85□□□□□ -1.15
LIN28A-201ENST00000254231 IGKV2-28A0A075B6P5 120 aa7.85□□□□□ -1.15
LIN28A-201ENST00000254231 IGKV2D-28P01615 120 aa7.85□□□□□ -1.15
LIN28A-201ENST00000254231 CFC1BP0CG36 223 aa7.85□□□□□ -1.15
LIN28A-201ENST00000254231 CFC1P0CG37 223 aa7.85□□□□□ -1.15
LIN28A-201ENST00000254231 CMYA5Q8N3K9 4069 aa7.85□□□□□ -1.15
LIN28A-201ENST00000254231 RPL13AP40429 203 aaKnown RBP7.84□□□□□ -1.15
LIN28A-201ENST00000254231 CLEC2BQ92478 149 aa7.84□□□□□ -1.15
LIN28A-201ENST00000254231 TIRAPP58753 221 aa7.84□□□□□ -1.15
LIN28A-201ENST00000254231 SND1-IT1Q9HBX3 110 aa7.84□□□□□ -1.15
LIN28A-201ENST00000254231 FLG2Q5D862 2391 aaPredicted RBP7.84□□□□□ -1.15
LIN28A-201ENST00000254231 RPL37AP8A6NKH3 93 aa7.84□□□□□ -1.15
LIN28A-201ENST00000254231 SS18L2Q9UHA2 77 aa7.83□□□□□ -1.16
LIN28A-201ENST00000254231 A0A087WZ39 114 aa7.83□□□□□ -1.16
LIN28A-201ENST00000254231 B5MCH6 92 aa7.83□□□□□ -1.16
LIN28A-201ENST00000254231 XGP55808 180 aa7.82□□□□□ -1.16
LIN28A-201ENST00000254231 S100A7L2Q5SY68 101 aa7.82□□□□□ -1.16
LIN28A-201ENST00000254231 HUWE1Q7Z6Z7 4374 aaKnown RBP7.82□□□□□ -1.16
LIN28A-201ENST00000254231 TEX49A0A1B0GTD5 131 aa7.82□□□□□ -1.16
LIN28A-201ENST00000254231 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
LIN28A-201ENST00000254231 CSDC2Q9Y534 153 aaKnown RBP7.82□□□□□ -1.16
LIN28A-201ENST00000254231 TRAV8-4A0A0B4J246 113 aa7.82□□□□□ -1.16
LIN28A-201ENST00000254231 FAM19A5Q7Z5A7 132 aaPredicted RBP7.82□□□□□ -1.16
LIN28A-201ENST00000254231 TEN1Q86WV5 123 aa7.82□□□□□ -1.16
LIN28A-201ENST00000254231 KRTAP1-5Q9BYS1 174 aa7.82□□□□□ -1.16
LIN28A-201ENST00000254231 USP17L23D6RBM5 183 aa7.81□□□□□ -1.16
LIN28A-201ENST00000254231 CHTF8P0CG12 524 aa7.81□□□□□ -1.16
LIN28A-201ENST00000254231 SOSTDC1Q6X4U4 206 aa7.81□□□□□ -1.16
LIN28A-201ENST00000254231 Q6ZRU5 148 aa7.81□□□□□ -1.16
LIN28A-201ENST00000254231 LINC00308Q8TCZ7 52 aa7.81□□□□□ -1.16
LIN28A-201ENST00000254231 C15orf53Q8NAA6 179 aa7.8□□□□□ -1.16
LIN28A-201ENST00000254231 SMCPP49901 116 aaPredicted RBP7.8□□□□□ -1.16
LIN28A-201ENST00000254231 MIAQ16674 131 aa7.8□□□□□ -1.16
LIN28A-201ENST00000254231 SLPIP03973 132 aa7.79□□□□□ -1.16
LIN28A-201ENST00000254231 ATXN8Q156A1 80 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms