RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SMIM1B2RUZ4 78 aa9.61□□□□□ -0.87
PCDHGA3-201ENST00000253812 CDC42SE2Q9NRR3 84 aa9.61□□□□□ -0.87
PCDHGA3-201ENST00000253812 NUP210LQ5VU65 1888 aa9.61□□□□□ -0.87
PCDHGA3-201ENST00000253812 SMCPP49901 116 aaPredicted RBP9.6□□□□□ -0.87
PCDHGA3-201ENST00000253812 CXCL6P80162 114 aa9.6□□□□□ -0.87
PCDHGA3-201ENST00000253812 HCFC1P51610 2035 aa9.6□□□□□ -0.87
PCDHGA3-201ENST00000253812 LINC01548A6NM66 108 aa9.6□□□□□ -0.87
PCDHGA3-201ENST00000253812 LINC01547P58512 204 aaPredicted RBP9.6□□□□□ -0.87
PCDHGA3-201ENST00000253812 IGHV4-30-4P0DP06 118 aa9.59□□□□□ -0.87
PCDHGA3-201ENST00000253812 IGHV4-31P0DP07 118 aa9.59□□□□□ -0.87
PCDHGA3-201ENST00000253812 ZNF843Q8N446 348 aa9.59□□□□□ -0.87
PCDHGA3-201ENST00000253812 C1orf137Q5JT78 98 aa9.59□□□□□ -0.87
PCDHGA3-201ENST00000253812 LY6LH3BQJ8 138 aa9.59□□□□□ -0.87
PCDHGA3-201ENST00000253812 A0A087WZ39 114 aa9.58□□□□□ -0.88
PCDHGA3-201ENST00000253812 DNAJC9-AS1A6NH13 148 aa9.58□□□□□ -0.88
PCDHGA3-201ENST00000253812 LRP4O75096 1905 aa9.58□□□□□ -0.88
PCDHGA3-201ENST00000253812 CHD9Q3L8U1 2897 aa9.58□□□□□ -0.88
PCDHGA3-201ENST00000253812 MRGPRG-AS1Q2M3A8 158 aa9.58□□□□□ -0.88
PCDHGA3-201ENST00000253812 PSMG3-AS1Q96PY0 264 aa9.57□□□□□ -0.88
PCDHGA3-201ENST00000253812 LINC00575Q6W349 94 aa9.57□□□□□ -0.88
PCDHGA3-201ENST00000253812 A0A0C4DFX4 3053 aa9.56□□□□□ -0.88
PCDHGA3-201ENST00000253812 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
PCDHGA3-201ENST00000253812 DEFB114Q30KQ6 69 aa9.56□□□□□ -0.88
PCDHGA3-201ENST00000253812 H0Y9P7 68 aa9.55□□□□□ -0.88
PCDHGA3-201ENST00000253812 AGRNO00468 2067 aa9.55□□□□□ -0.88
PCDHGA3-201ENST00000253812 IGLV2-18A0A075B6J9 118 aa9.55□□□□□ -0.88
PCDHGA3-201ENST00000253812 AMELXQ99217 191 aa9.55□□□□□ -0.88
PCDHGA3-201ENST00000253812 COX8CQ7Z4L0 72 aa9.55□□□□□ -0.88
PCDHGA3-201ENST00000253812 PCOTHQ58A44 107 aa9.53□□□□□ -0.88
PCDHGA3-201ENST00000253812 FSTL3O95633 263 aa9.53□□□□□ -0.88
PCDHGA3-201ENST00000253812 CDSNQ15517 529 aa9.53□□□□□ -0.88
PCDHGA3-201ENST00000253812 SBSPONQ8IVN8 264 aa9.52□□□□□ -0.89
PCDHGA3-201ENST00000253812 TNFRSF13BO14836 293 aaPredicted RBP9.52□□□□□ -0.89
PCDHGA3-201ENST00000253812 CYSRT1A8MQ03 144 aa9.52□□□□□ -0.89
PCDHGA3-201ENST00000253812 DNAH14Q0VDD8 3507 aa9.51□□□□□ -0.89
PCDHGA3-201ENST00000253812 ZNF580Q9UK33 172 aa9.51□□□□□ -0.89
PCDHGA3-201ENST00000253812 SPAG11AQ6PDA7 123 aa9.51□□□□□ -0.89
PCDHGA3-201ENST00000253812 C11orf71Q6IPW1 123 aa9.5□□□□□ -0.89
PCDHGA3-201ENST00000253812 ZNF706Q9Y5V0 76 aaPredicted RBP9.5□□□□□ -0.89
PCDHGA3-201ENST00000253812 HCG22E2RYF7 251 aa9.49□□□□□ -0.89
PCDHGA3-201ENST00000253812 C10orf25Q5T742 122 aa9.49□□□□□ -0.89
PCDHGA3-201ENST00000253812 PRUNE2Q8WUY3 3088 aa9.49□□□□□ -0.89
PCDHGA3-201ENST00000253812 BBC3Q96PG8 261 aaPredicted RBP9.48□□□□□ -0.89
PCDHGA3-201ENST00000253812 PKD1L2Q7Z442 2459 aa9.48□□□□□ -0.89
PCDHGA3-201ENST00000253812 INAFM1C9JVW0 142 aa9.48□□□□□ -0.89
PCDHGA3-201ENST00000253812 F8WDY8 70 aa9.48□□□□□ -0.89
PCDHGA3-201ENST00000253812 CHCHD7Q9BUK0 85 aa9.48□□□□□ -0.89
PCDHGA3-201ENST00000253812 RPL37AP8A6NKH3 93 aa9.47□□□□□ -0.89
PCDHGA3-201ENST00000253812 EGFEM1PQ0D2K5 195 aa9.47□□□□□ -0.89
PCDHGA3-201ENST00000253812 LELP1Q5T871 98 aa9.47□□□□□ -0.89
PCDHGA3-201ENST00000253812 UNQ6190/PRO20217Q6UXQ8 127 aa9.47□□□□□ -0.89
PCDHGA3-201ENST00000253812 COX6A2Q02221 97 aa9.47□□□□□ -0.89
PCDHGA3-201ENST00000253812 PLA2G2AP14555 144 aa9.47□□□□□ -0.89
PCDHGA3-201ENST00000253812 CD164Q04900 197 aa9.47□□□□□ -0.89
PCDHGA3-201ENST00000253812 PRRC2CQ9Y520 2896 aaKnown RBP9.47□□□□□ -0.89
PCDHGA3-201ENST00000253812 XIRP2A4UGR9 3374 aa9.47□□□□□ -0.89
PCDHGA3-201ENST00000253812 SZT2Q5T011 3432 aa9.47□□□□□ -0.89
PCDHGA3-201ENST00000253812 PRR3P79522 188 aaKnown RBP9.47□□□□□ -0.89
PCDHGA3-201ENST00000253812 LOC100131303A0A0U1RQF7 123 aa9.46□□□□□ -0.89
PCDHGA3-201ENST00000253812 C11orf45Q8TAV5 145 aa9.46□□□□□ -0.89
PCDHGA3-201ENST00000253812 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.9
PCDHGA3-201ENST00000253812 C8orf87E5RJ46 101 aa9.46□□□□□ -0.9
PCDHGA3-201ENST00000253812 C1orf64Q8NEQ6 169 aa9.46□□□□□ -0.9
PCDHGA3-201ENST00000253812 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.45□□□□□ -0.9
PCDHGA3-201ENST00000253812 TRANK1O15050 2925 aa9.45□□□□□ -0.9
PCDHGA3-201ENST00000253812 FAM19A4Q96LR4 140 aa9.43□□□□□ -0.9
PCDHGA3-201ENST00000253812 TRIOO75962 3097 aa9.43□□□□□ -0.9
PCDHGA3-201ENST00000253812 A0A087WSZ3 146 aa9.43□□□□□ -0.9
PCDHGA3-201ENST00000253812 C9orf116Q5BN46 136 aaPredicted RBP9.42□□□□□ -0.9
PCDHGA3-201ENST00000253812 DEFB131BA0A096LNP1 70 aa9.42□□□□□ -0.9
PCDHGA3-201ENST00000253812 SMIM29Q86T20 159 aa9.41□□□□□ -0.9
PCDHGA3-201ENST00000253812 A0A1B0GU69 56 aa9.4□□□□□ -0.9
PCDHGA3-201ENST00000253812 LINC01546A6NGU7 62 aa9.4□□□□□ -0.9
PCDHGA3-201ENST00000253812 IGLV9-49A0A0B4J1Y8 123 aa9.4□□□□□ -0.9
PCDHGA3-201ENST00000253812 Q6YL49 198 aa9.4□□□□□ -0.9
PCDHGA3-201ENST00000253812 EML5Q05BV3 1969 aa9.4□□□□□ -0.9
PCDHGA3-201ENST00000253812 Q9UF83 564 aa9.4□□□□□ -0.9
PCDHGA3-201ENST00000253812 IL17DQ8TAD2 202 aa9.4□□□□□ -0.91
PCDHGA3-201ENST00000253812 FHL2Q14192 279 aa9.39□□□□□ -0.91
PCDHGA3-201ENST00000253812 MUC4Q99102 2169 aa9.39□□□□□ -0.91
PCDHGA3-201ENST00000253812 PRM2P04554 102 aa9.39□□□□□ -0.91
PCDHGA3-201ENST00000253812 F8P00451 2351 aa9.39□□□□□ -0.91
PCDHGA3-201ENST00000253812 C10orf99Q6UWK7 81 aa9.39□□□□□ -0.91
PCDHGA3-201ENST00000253812 IGHV6-1A0A0B4J1U7 121 aa9.39□□□□□ -0.91
PCDHGA3-201ENST00000253812 KPRPQ5T749 579 aaPredicted RBP9.39□□□□□ -0.91
PCDHGA3-201ENST00000253812 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
PCDHGA3-201ENST00000253812 SPATA3Q8NHX4 192 aa9.38□□□□□ -0.91
PCDHGA3-201ENST00000253812 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
PCDHGA3-201ENST00000253812 COL5A1P20908 1838 aaPredicted RBP9.37□□□□□ -0.91
PCDHGA3-201ENST00000253812 IGLV4-60A0A075B6I1 120 aa9.37□□□□□ -0.91
PCDHGA3-201ENST00000253812 H3BPC8 53 aa9.37□□□□□ -0.91
PCDHGA3-201ENST00000253812 Q8N2B8 174 aa9.37□□□□□ -0.91
PCDHGA3-201ENST00000253812 IGLV5-39A0A0G2JS06 123 aa9.36□□□□□ -0.91
PCDHGA3-201ENST00000253812 A0A1W2PPR1 153 aa9.36□□□□□ -0.91
PCDHGA3-201ENST00000253812 NHLRC4P0CG21 123 aaPredicted RBP9.36□□□□□ -0.91
PCDHGA3-201ENST00000253812 CYP4F30PQ9H0H9 118 aa9.36□□□□□ -0.91
PCDHGA3-201ENST00000253812 A0A1B0GW54 56 aa9.36□□□□□ -0.91
PCDHGA3-201ENST00000253812 LY6G6DO95868 133 aa9.35□□□□□ -0.91
PCDHGA3-201ENST00000253812 SPINK1P00995 79 aa9.35□□□□□ -0.91
PCDHGA3-201ENST00000253812 DEFB116Q30KQ4 102 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms