RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 Q8NA96 180 aa9.97□□□□□ -0.81
TARDBP-201ENST00000240185 COL4A3Q01955 1670 aa9.97□□□□□ -0.81
TARDBP-201ENST00000240185 CXCL6P80162 114 aa9.97□□□□□ -0.81
TARDBP-201ENST00000240185 C6orf223Q8N319 242 aa9.97□□□□□ -0.81
TARDBP-201ENST00000240185 AMELXQ99217 191 aa9.97□□□□□ -0.81
TARDBP-201ENST00000240185 RPS28P62857 69 aaKnown RBP9.96□□□□□ -0.81
TARDBP-201ENST00000240185 PSMG3-AS1Q96PY0 264 aa9.96□□□□□ -0.81
TARDBP-201ENST00000240185 IGLV4-60A0A075B6I1 120 aa9.96□□□□□ -0.81
TARDBP-201ENST00000240185 Q9BRP9 147 aa9.96□□□□□ -0.81
TARDBP-201ENST00000240185 SBSPONQ8IVN8 264 aa9.94□□□□□ -0.82
TARDBP-201ENST00000240185 A0A1B0GU69 56 aa9.94□□□□□ -0.82
TARDBP-201ENST00000240185 PCNTO95613 3336 aa9.94□□□□□ -0.82
TARDBP-201ENST00000240185 MUC6Q6W4X9 2439 aa9.94□□□□□ -0.82
TARDBP-201ENST00000240185 A8MTW9 85 aa9.93□□□□□ -0.82
TARDBP-201ENST00000240185 C18orf65Q6ZTR6 163 aa9.93□□□□□ -0.82
TARDBP-201ENST00000240185 ZNF702PQ9H963 129 aa9.93□□□□□ -0.82
TARDBP-201ENST00000240185 SMIM29Q86T20 159 aa9.92□□□□□ -0.82
TARDBP-201ENST00000240185 PLA2G2AP14555 144 aa9.92□□□□□ -0.82
TARDBP-201ENST00000240185 C19orf84I3L1E1 186 aa9.92□□□□□ -0.82
TARDBP-201ENST00000240185 LTBP2Q14767 1821 aa9.91□□□□□ -0.82
TARDBP-201ENST00000240185 IGLV1-40P01703 118 aa9.91□□□□□ -0.82
TARDBP-201ENST00000240185 NAV2Q8IVL1 2488 aa9.91□□□□□ -0.82
TARDBP-201ENST00000240185 LINC00337Q8N6G1 96 aa9.91□□□□□ -0.82
TARDBP-201ENST00000240185 ZNF106Q9H2Y7 1883 aaKnown RBP9.9□□□□□ -0.83
TARDBP-201ENST00000240185 AGRNO00468 2067 aa9.89□□□□□ -0.83
TARDBP-201ENST00000240185 C2orf16Q68DN1 1984 aa9.89□□□□□ -0.83
TARDBP-201ENST00000240185 LINC01006Q8NI28 216 aa9.89□□□□□ -0.83
TARDBP-201ENST00000240185 ADAMTS9Q9P2N4 1935 aa9.89□□□□□ -0.83
TARDBP-201ENST00000240185 NUP210Q8TEM1 1887 aaPredicted RBP9.87□□□□□ -0.83
TARDBP-201ENST00000240185 PCNX3Q9H6A9 2034 aa9.87□□□□□ -0.83
TARDBP-201ENST00000240185 INAFM1C9JVW0 142 aa9.87□□□□□ -0.83
TARDBP-201ENST00000240185 SMCPP49901 116 aaPredicted RBP9.87□□□□□ -0.83
TARDBP-201ENST00000240185 ODF3L2Q3SX64 289 aa9.86□□□□□ -0.83
TARDBP-201ENST00000240185 BCE1O60756 84 aa9.86□□□□□ -0.83
TARDBP-201ENST00000240185 C8orf87E5RJ46 101 aa9.86□□□□□ -0.83
TARDBP-201ENST00000240185 EDN2P20800 178 aa9.85□□□□□ -0.83
TARDBP-201ENST00000240185 C11orf71Q6IPW1 123 aa9.85□□□□□ -0.83
TARDBP-201ENST00000240185 ATP11AUNQ6ZP68 121 aa9.85□□□□□ -0.83
TARDBP-201ENST00000240185 DSCAMO60469 2012 aa9.85□□□□□ -0.83
TARDBP-201ENST00000240185 IGKV2D-30A0A075B6S6 120 aa9.84□□□□□ -0.83
TARDBP-201ENST00000240185 IGKV2-30P06310 120 aa9.84□□□□□ -0.83
TARDBP-201ENST00000240185 COX8CQ7Z4L0 72 aa9.84□□□□□ -0.83
TARDBP-201ENST00000240185 SPATA3Q8NHX4 192 aa9.84□□□□□ -0.83
TARDBP-201ENST00000240185 PRLHP81277 87 aa9.84□□□□□ -0.83
TARDBP-201ENST00000240185 Q6ZTC4 211 aa9.83□□□□□ -0.84
TARDBP-201ENST00000240185 FHL2Q14192 279 aa9.83□□□□□ -0.84
TARDBP-201ENST00000240185 ALPK3Q96L96 1907 aa9.83□□□□□ -0.84
TARDBP-201ENST00000240185 LINC01556Q5JQF7 62 aa9.82□□□□□ -0.84
TARDBP-201ENST00000240185 ACYP2P14621 99 aa9.82□□□□□ -0.84
TARDBP-201ENST00000240185 F8P00451 2351 aa9.82□□□□□ -0.84
TARDBP-201ENST00000240185 SPINT4Q6UDR6 99 aa9.81□□□□□ -0.84
TARDBP-201ENST00000240185 C7orf65Q6ZTY9 151 aa9.81□□□□□ -0.84
TARDBP-201ENST00000240185 LY6G6CO95867 125 aa9.81□□□□□ -0.84
TARDBP-201ENST00000240185 Q6ZSN1 163 aa9.81□□□□□ -0.84
TARDBP-201ENST00000240185 PRO0461Q9UI25 63 aa9.8□□□□□ -0.84
TARDBP-201ENST00000240185 EML5Q05BV3 1969 aa9.8□□□□□ -0.84
TARDBP-201ENST00000240185 A0A1B0GUV1 79 aa9.8□□□□□ -0.84
TARDBP-201ENST00000240185 C2orf48Q96LS8 159 aa9.8□□□□□ -0.84
TARDBP-201ENST00000240185 CENPFP49454 3210 aa9.79□□□□□ -0.84
TARDBP-201ENST00000240185 Q8N2B8 174 aa9.79□□□□□ -0.84
TARDBP-201ENST00000240185 KIAA0087Q14695 138 aa9.79□□□□□ -0.84
TARDBP-201ENST00000240185 TP53AIP1Q9HCN2 124 aa9.78□□□□□ -0.84
TARDBP-201ENST00000240185 F8WDY8 70 aa9.78□□□□□ -0.84
TARDBP-201ENST00000240185 Q6ZRU5 148 aa9.77□□□□□ -0.85
TARDBP-201ENST00000240185 LINC01561Q8N1V8 128 aa9.77□□□□□ -0.85
TARDBP-201ENST00000240185 C6orf48Q9UBA6 75 aa9.77□□□□□ -0.85
TARDBP-201ENST00000240185 FSHBP01225 129 aa9.76□□□□□ -0.85
TARDBP-201ENST00000240185 SMCR5Q8TEV8 140 aa9.76□□□□□ -0.85
TARDBP-201ENST00000240185 KIAA1549LQ6ZVL6 1849 aa9.75□□□□□ -0.85
TARDBP-201ENST00000240185 IGLV5-39A0A0G2JS06 123 aa9.75□□□□□ -0.85
TARDBP-201ENST00000240185 TLN2Q9Y4G6 2542 aa9.74□□□□□ -0.85
TARDBP-201ENST00000240185 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
TARDBP-201ENST00000240185 TM2D3Q9BRN9 247 aa9.74□□□□□ -0.85
TARDBP-201ENST00000240185 PLA2G1BP04054 148 aaKnown RBP9.74□□□□□ -0.85
TARDBP-201ENST00000240185 FAM218AQ96MZ4 157 aa9.73□□□□□ -0.85
TARDBP-201ENST00000240185 IGLV8-61A0A075B6I0 122 aa9.73□□□□□ -0.85
TARDBP-201ENST00000240185 TMEM131Q92545 1883 aa9.73□□□□□ -0.85
TARDBP-201ENST00000240185 DNAH12Q6ZR08 3092 aa9.73□□□□□ -0.85
TARDBP-201ENST00000240185 H3BPC8 53 aa9.72□□□□□ -0.85
TARDBP-201ENST00000240185 IGLV5-52A0A0A0MRZ9 124 aa9.72□□□□□ -0.85
TARDBP-201ENST00000240185 C22orf24Q9Y442 160 aa9.72□□□□□ -0.85
TARDBP-201ENST00000240185 NUPR2A6NF83 97 aa9.71□□□□□ -0.85
TARDBP-201ENST00000240185 KIF26AQ9ULI4 1882 aaPredicted RBP9.71□□□□□ -0.85
TARDBP-201ENST00000240185 IGLV1-51P01701 117 aa9.71□□□□□ -0.86
TARDBP-201ENST00000240185 BRI3O95415 125 aa9.7□□□□□ -0.86
TARDBP-201ENST00000240185 FAM19A4Q96LR4 140 aa9.7□□□□□ -0.86
TARDBP-201ENST00000240185 LY6G6DO95868 133 aa9.7□□□□□ -0.86
TARDBP-201ENST00000240185 KIF25-AS1Q9Y6Z4 181 aa9.7□□□□□ -0.86
TARDBP-201ENST00000240185 Q6ZQT0 140 aa9.69□□□□□ -0.86
TARDBP-201ENST00000240185 MUC22E2RYF6 1773 aaPredicted RBP9.69□□□□□ -0.86
TARDBP-201ENST00000240185 A8MUN3 132 aa9.69□□□□□ -0.86
TARDBP-201ENST00000240185 AVPP01185 164 aa9.69□□□□□ -0.86
TARDBP-201ENST00000240185 TRAV22A0A0B4J277 110 aa9.69□□□□□ -0.86
TARDBP-201ENST00000240185 LYPD5Q6UWN5 251 aa9.69□□□□□ -0.86
TARDBP-201ENST00000240185 PIEZO2Q9H5I5 2752 aa9.68□□□□□ -0.86
TARDBP-201ENST00000240185 IGHV3OR16-9A0A0B4J2B5 98 aa9.68□□□□□ -0.86
TARDBP-201ENST00000240185 A0A1B0GW54 56 aa9.68□□□□□ -0.86
TARDBP-201ENST00000240185 C11orf72Q8NBR9 251 aa9.68□□□□□ -0.86
TARDBP-201ENST00000240185 LINC01546A6NGU7 62 aa9.67□□□□□ -0.86
TARDBP-201ENST00000240185 PTPRSQ13332 1948 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms