RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 KIR2DL4Q99706 377 aa3.84□□□□□ -1.79
AFP-201ENST00000226359 SIGMAR1Q99720 223 aa3.84□□□□□ -1.79
AFP-201ENST00000226359 TRBV6-5A0A0K0K1A5 114 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 SDHAF1A6NFY7 115 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 LINC01549A6NIU2 74 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 TSPAN13O95857 204 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 HSD52Q0P140 79 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 Q6ZRP5 223 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 KRTAP1-5Q9BYS1 174 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 SPCS1Q9Y6A9 102 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 A0A087WX48 190 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 TRAV8-3A0A0A6YYJ7 113 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 A0A1W2PPM0 123 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.83□□□□□ -1.8
AFP-201ENST00000226359 M0QY20 66 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 IGHV3-30P01768 117 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 IGHV3-33P01772 117 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 IGHV3-30-3P0DP02 117 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 IGHV3-30-5P0DP03 117 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 FABP2P12104 132 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 POLR2KP53803 58 aaKnown RBP3.83□□□□□ -1.8
AFP-201ENST00000226359 LINC01547P58512 204 aaPredicted RBP3.83□□□□□ -1.8
AFP-201ENST00000226359 CHCHD7Q9BUK0 85 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 CYSLTR1Q9Y271 337 aa3.83□□□□□ -1.8
AFP-201ENST00000226359 DNAH11Q96DT5 4516 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 SMIM1B2RUZ4 78 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 I3L3M4 83 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 CRPP02741 224 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 FGF6P10767 208 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 C2orf66Q6UXQ4 117 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 RAB37Q96AX2 223 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 TOMM6Q96B49 74 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 NAA38Q9BRA0 125 aaKnown RBP3.82□□□□□ -1.8
AFP-201ENST00000226359 NACAE9PAV3 2078 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 TRBV7-3A0A075B6L6 115 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 IBA57-AS1B1ANH7 110 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 DPM2O94777 84 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 SMIM13P0DJ93 91 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 LINC00694P0DN24 101 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 DNAJC30Q96LL9 226 aa3.82□□□□□ -1.8
AFP-201ENST00000226359 TRAV12-1A0A0B4J245 112 aa3.81□□□□□ -1.8
AFP-201ENST00000226359 TRBV27A0A0K0K1C4 114 aa3.81□□□□□ -1.8
AFP-201ENST00000226359 TMEM262E9PQX1 116 aa3.81□□□□□ -1.8
AFP-201ENST00000226359 J3QR89 54 aa3.81□□□□□ -1.8
AFP-201ENST00000226359 IGKCP01834 107 aa3.81□□□□□ -1.8
AFP-201ENST00000226359 CKS1BP61024 79 aa3.81□□□□□ -1.8
AFP-201ENST00000226359 SMAGPQ0VAQ4 97 aa3.81□□□□□ -1.8
AFP-201ENST00000226359 DAZ4Q86SG3 579 aaKnown RBP3.81□□□□□ -1.8
AFP-201ENST00000226359 BOD1L2Q8IYS8 172 aa3.81□□□□□ -1.8
AFP-201ENST00000226359 TMEM141Q96I45 108 aa3.81□□□□□ -1.8
AFP-201ENST00000226359 DAZ3Q9NR90 486 aaKnown RBP3.81□□□□□ -1.8
AFP-201ENST00000226359 DNAH2Q9P225 4427 aa3.81□□□□□ -1.8
AFP-201ENST00000226359 A0A087WTM6 91 aa3.8□□□□□ -1.8
AFP-201ENST00000226359 UBE2D3P61077 147 aa3.8□□□□□ -1.8
AFP-201ENST00000226359 UBE2D2P62837 147 aa3.8□□□□□ -1.8
AFP-201ENST00000226359 Q6ZRN7 208 aaPredicted RBP3.8□□□□□ -1.8
AFP-201ENST00000226359 DEFB104AQ8WTQ1 72 aa3.8□□□□□ -1.8
AFP-201ENST00000226359 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
AFP-201ENST00000226359 TRBV25-1A0A075B6N4 114 aa3.8□□□□□ -1.8
AFP-201ENST00000226359 IGKV2D-24A0A075B6R9 120 aa3.8□□□□□ -1.8
AFP-201ENST00000226359 UBE2L6O14933 153 aa3.8□□□□□ -1.8
AFP-201ENST00000226359 PLNP26678 52 aa3.8□□□□□ -1.8
AFP-201ENST00000226359 C14orf177Q52M58 125 aa3.8□□□□□ -1.8
AFP-201ENST00000226359 MRPL35Q9NZE8 188 aaKnown RBP3.8□□□□□ -1.8
AFP-201ENST00000226359 HERC2O95714 4834 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 FAT2Q9NYQ8 4349 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 DYNC1H1Q14204 4646 aaKnown RBP3.79□□□□□ -1.8
AFP-201ENST00000226359 TRBV6-8A0A0A6YYG3 113 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 F8VRH5 84 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 NMUP48645 174 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 PMVKQ15126 192 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 LINC00242Q5T6M2 205 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 MTURNQ8N3F0 131 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 BAALCQ8WXS3 180 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 UBE2WQ96B02 151 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 TIMM17AQ99595 171 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 KLK12Q9UKR0 248 aa3.79□□□□□ -1.8
AFP-201ENST00000226359 F8W1H4 67 aa3.78□□□□□ -1.8
AFP-201ENST00000226359 RPL39P62891 51 aaKnown RBP3.78□□□□□ -1.8
AFP-201ENST00000226359 ZC2HC1BQ5TFG8 222 aa3.78□□□□□ -1.8
AFP-201ENST00000226359 C20orf203Q8NBC4 194 aa3.78□□□□□ -1.8
AFP-201ENST00000226359 IGIPA6NJ69 53 aa3.78□□□□□ -1.81
AFP-201ENST00000226359 ANGP03950 147 aaKnown RBP3.78□□□□□ -1.81
AFP-201ENST00000226359 Q8N814 137 aa3.78□□□□□ -1.81
AFP-201ENST00000226359 TMEM243Q9BU79 118 aa3.78□□□□□ -1.81
AFP-201ENST00000226359 SPANXB1Q9NS25 103 aaPredicted RBP3.78□□□□□ -1.81
AFP-201ENST00000226359 HIGD1BQ9P298 99 aa3.78□□□□□ -1.81
AFP-201ENST00000226359 Q9UF83 564 aa3.78□□□□□ -1.81
AFP-201ENST00000226359 PYGO1Q9Y3Y4 419 aa3.78□□□□□ -1.81
AFP-201ENST00000226359 HERVK_113P61574 105 aa3.77□□□□□ -1.81
AFP-201ENST00000226359 WFDC2Q14508 124 aa3.77□□□□□ -1.81
AFP-201ENST00000226359 MIAQ16674 131 aa3.77□□□□□ -1.81
AFP-201ENST00000226359 REG3GQ6UW15 175 aa3.77□□□□□ -1.81
AFP-201ENST00000226359 PCP2Q8IVA1 136 aa3.77□□□□□ -1.81
AFP-201ENST00000226359 E9PLD3 99 aa3.76□□□□□ -1.81
AFP-201ENST00000226359 FXYD2P54710 66 aa3.76□□□□□ -1.81
AFP-201ENST00000226359 CHAC1Q9BUX1 264 aa3.76□□□□□ -1.81
AFP-201ENST00000226359 DNAH5Q8TE73 4624 aa3.76□□□□□ -1.81
AFP-201ENST00000226359 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.76□□□□□ -1.81
AFP-201ENST00000226359 IGKV2-29A2NJV5 120 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms