RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 DEFB135Q30KP9 77 aa15.42■□□□□ 0.06
CCDC9-201ENST00000221922 TTC32Q5I0X7 151 aa15.42■□□□□ 0.06
CCDC9-201ENST00000221922 FAM218AQ96MZ4 157 aa15.42■□□□□ 0.06
CCDC9-201ENST00000221922 F8P00451 2351 aa15.41■□□□□ 0.06
CCDC9-201ENST00000221922 A0A087WZ39 114 aa15.41■□□□□ 0.06
CCDC9-201ENST00000221922 A0A1B0GUV1 79 aa15.41■□□□□ 0.06
CCDC9-201ENST00000221922 ACYP1P07311 99 aa15.41■□□□□ 0.06
CCDC9-201ENST00000221922 IGKV2-28A0A075B6P5 120 aa15.4■□□□□ 0.06
CCDC9-201ENST00000221922 IGKV2D-28P01615 120 aa15.4■□□□□ 0.06
CCDC9-201ENST00000221922 LINC00337Q8N6G1 96 aa15.4■□□□□ 0.06
CCDC9-201ENST00000221922 TOMM7Q9P0U1 55 aa15.4■□□□□ 0.06
CCDC9-201ENST00000221922 PAX4O43316 350 aa15.4■□□□□ 0.06
CCDC9-201ENST00000221922 CRPP02741 224 aa15.4■□□□□ 0.06
CCDC9-201ENST00000221922 BAALC-AS2P0C853 105 aa15.4■□□□□ 0.06
CCDC9-201ENST00000221922 SND1-IT1Q9HBX3 110 aa15.4■□□□□ 0.06
CCDC9-201ENST00000221922 C22orf24Q9Y442 160 aa15.39■□□□□ 0.05
CCDC9-201ENST00000221922 LINC00959A0A1B0GUT2 108 aa15.39■□□□□ 0.05
CCDC9-201ENST00000221922 IBA57-AS1B1ANH7 110 aa15.39■□□□□ 0.05
CCDC9-201ENST00000221922 LINC00158P58513 81 aa15.37■□□□□ 0.05
CCDC9-201ENST00000221922 IGHV4-28A0A0C4DH34 117 aa15.36■□□□□ 0.05
CCDC9-201ENST00000221922 TRBV7-7A0A0K0K1E9 115 aa15.36■□□□□ 0.05
CCDC9-201ENST00000221922 CCL18P55774 89 aa15.36■□□□□ 0.05
CCDC9-201ENST00000221922 SS18Q15532 418 aa15.36■□□□□ 0.05
CCDC9-201ENST00000221922 MIFP14174 115 aa15.35■□□□□ 0.05
CCDC9-201ENST00000221922 DAD1P61803 113 aa15.35■□□□□ 0.05
CCDC9-201ENST00000221922 MAST4O15021 2626 aa15.34■□□□□ 0.05
CCDC9-201ENST00000221922 C5orf38Q86SI9 138 aa15.34■□□□□ 0.05
CCDC9-201ENST00000221922 Q8NAQ8 132 aa15.33■□□□□ 0.04
CCDC9-201ENST00000221922 IGHV4-30-4P0DP06 118 aa15.32■□□□□ 0.04
CCDC9-201ENST00000221922 DEFB4AO15263 64 aa15.32■□□□□ 0.04
CCDC9-201ENST00000221922 SMIM11BQ8TCY0 68 aa15.32■□□□□ 0.04
CCDC9-201ENST00000221922 SDIM1Q6ZPB5 146 aa15.31■□□□□ 0.04
CCDC9-201ENST00000221922 LINC01561Q8N1V8 128 aa15.31■□□□□ 0.04
CCDC9-201ENST00000221922 A0A096LPF7 62 aa15.31■□□□□ 0.04
CCDC9-201ENST00000221922 ATP5G1P05496 136 aa15.31■□□□□ 0.04
CCDC9-201ENST00000221922 NBEAL2Q6ZNJ1 2754 aa15.3■□□□□ 0.04
CCDC9-201ENST00000221922 MALP21145 153 aa15.3■□□□□ 0.04
CCDC9-201ENST00000221922 Q9HAA7 133 aa15.29■□□□□ 0.04
CCDC9-201ENST00000221922 INAFM2P0DMQ5 153 aa15.29■□□□□ 0.04
CCDC9-201ENST00000221922 XCL1P47992 114 aa15.29■□□□□ 0.04
CCDC9-201ENST00000221922 H0YGX0 51 aa15.28■□□□□ 0.04
CCDC9-201ENST00000221922 KRTAP24-1Q3LI83 254 aa15.28■□□□□ 0.04
CCDC9-201ENST00000221922 IMUPQ9GZP8 106 aa15.28■□□□□ 0.04
CCDC9-201ENST00000221922 SPART-AS1P0CW21 52 aa15.28■□□□□ 0.04
CCDC9-201ENST00000221922 PFN2P35080 140 aa15.28■□□□□ 0.04
CCDC9-201ENST00000221922 SMCR5Q8TEV8 140 aa15.28■□□□□ 0.04
CCDC9-201ENST00000221922 C6orf226Q5I0X4 101 aa15.26■□□□□ 0.03
CCDC9-201ENST00000221922 LINC00643Q86TS7 51 aa15.26■□□□□ 0.03
CCDC9-201ENST00000221922 CELA1Q9UNI1 258 aa15.26■□□□□ 0.03
CCDC9-201ENST00000221922 A0A087WYN8 130 aa15.26■□□□□ 0.03
CCDC9-201ENST00000221922 Q8IZM0 81 aa15.26■□□□□ 0.03
CCDC9-201ENST00000221922 CCDC179H3BU77 68 aa15.24■□□□□ 0.03
CCDC9-201ENST00000221922 B5MCH6 92 aa15.24■□□□□ 0.03
CCDC9-201ENST00000221922 CLPSL2Q6UWE3 100 aa15.24■□□□□ 0.03
CCDC9-201ENST00000221922 TRRAPQ9Y4A5 3859 aa15.24■□□□□ 0.03
CCDC9-201ENST00000221922 DNAL4O96015 105 aa15.23■□□□□ 0.03
CCDC9-201ENST00000221922 CD164L2Q6UWJ8 174 aa15.22■□□□□ 0.03
CCDC9-201ENST00000221922 LINC00269Q8N2A0 174 aa15.22■□□□□ 0.03
CCDC9-201ENST00000221922 OXLD1Q5BKU9 147 aa15.21■□□□□ 0.03
CCDC9-201ENST00000221922 ANGP03950 147 aaKnown RBP15.2■□□□□ 0.02
CCDC9-201ENST00000221922 OBSCN-AS1Q96MR7 158 aa15.2■□□□□ 0.02
CCDC9-201ENST00000221922 KRTAP10-11P60412 298 aa15.19■□□□□ 0.02
CCDC9-201ENST00000221922 EGFEM1PQ0D2K5 195 aa15.19■□□□□ 0.02
CCDC9-201ENST00000221922 C11orf68Q9H3H3 251 aaKnown RBP15.19■□□□□ 0.02
CCDC9-201ENST00000221922 REG3AQ06141 175 aa15.18■□□□□ 0.02
CCDC9-201ENST00000221922 LELP1Q5T871 98 aa15.18■□□□□ 0.02
CCDC9-201ENST00000221922 C3orf56Q8N813 242 aa15.18■□□□□ 0.02
CCDC9-201ENST00000221922 CHCHD10Q8WYQ3 142 aaPredicted RBP15.18■□□□□ 0.02
CCDC9-201ENST00000221922 CXCL5P42830 114 aa15.17■□□□□ 0.02
CCDC9-201ENST00000221922 GAGE2AQ6NT46 116 aa15.17■□□□□ 0.02
CCDC9-201ENST00000221922 OR13C6PQ8NH95 151 aa15.17■□□□□ 0.02
CCDC9-201ENST00000221922 SS18L2Q9UHA2 77 aa15.17■□□□□ 0.02
CCDC9-201ENST00000221922 HTN3P15516 51 aa15.16■□□□□ 0.02
CCDC9-201ENST00000221922 LECT2O14960 151 aa15.16■□□□□ 0.02
CCDC9-201ENST00000221922 C9orf129Q5T035 196 aaKnown RBP15.15■□□□□ 0.02
CCDC9-201ENST00000221922 CFAP161Q6P656 301 aa15.15■□□□□ 0.02
CCDC9-201ENST00000221922 KIAA0087Q14695 138 aa15.14■□□□□ 0.01
CCDC9-201ENST00000221922 FAM236AA0A1B0GUQ0 79 aa15.13■□□□□ 0.01
CCDC9-201ENST00000221922 FAM236BA0A1B0GV22 79 aa15.13■□□□□ 0.01
CCDC9-201ENST00000221922 COX17Q14061 63 aa15.12■□□□□ 0.01
CCDC9-201ENST00000221922 Q8N3U1 123 aa15.12■□□□□ 0.01
CCDC9-201ENST00000221922 IGLV10-54A0A075B6I4 117 aa15.11■□□□□ 0.01
CCDC9-201ENST00000221922 NDUFC2O95298 119 aa15.1■□□□□ 0.01
CCDC9-201ENST00000221922 C14orf132Q9NPU4 83 aa15.1■□□□□ 0.01
CCDC9-201ENST00000221922 KLK5Q9Y337 293 aaPredicted RBP15.1■□□□□ 0.01
CCDC9-201ENST00000221922 NANOS2P60321 138 aaKnown RBP15.1■□□□□ 0.01
CCDC9-201ENST00000221922 LINC00167Q96N53 147 aa15.09■□□□□ 0.01
CCDC9-201ENST00000221922 ORMDL1Q9P0S3 153 aa15.08■□□□□ 0
CCDC9-201ENST00000221922 A0A1B0GX51 115 aa15.07■□□□□ 0
CCDC9-201ENST00000221922 FBN1P35555 2871 aaKnown RBP15.07■□□□□ 0
CCDC9-201ENST00000221922 SLPIP03973 132 aa15.06■□□□□ 0
CCDC9-201ENST00000221922 RETNQ9HD89 108 aa15.06■□□□□ 0
CCDC9-201ENST00000221922 PRR3P79522 188 aaKnown RBP15.05■□□□□ 0
CCDC9-201ENST00000221922 PRR34Q9NV39 138 aa15.05■□□□□ 0
CCDC9-201ENST00000221922 H3BNG1 76 aa15.04■□□□□ -0
CCDC9-201ENST00000221922 NCR3O14931 201 aa15.04■□□□□ -0
CCDC9-201ENST00000221922 TMEM126AQ9H061 195 aa15.04■□□□□ -0
CCDC9-201ENST00000221922 STAB1Q9NY15 2570 aa15.03■□□□□ -0
CCDC9-201ENST00000221922 LYPD5Q6UWN5 251 aa15.03■□□□□ -0
CCDC9-201ENST00000221922 KLK12Q9UKR0 248 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms