RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 Q8IZM0 81 aa14.61□□□□□ -0.07
CCDC130-201ENST00000221554 TENM1Q9UKZ4 2725 aa14.6□□□□□ -0.07
CCDC130-201ENST00000221554 SNCGO76070 127 aa14.6□□□□□ -0.07
CCDC130-201ENST00000221554 ACYP1P07311 99 aa14.58□□□□□ -0.08
CCDC130-201ENST00000221554 MIFP14174 115 aa14.58□□□□□ -0.08
CCDC130-201ENST00000221554 CKS1BP61024 79 aa14.58□□□□□ -0.08
CCDC130-201ENST00000221554 H0YGX0 51 aa14.57□□□□□ -0.08
CCDC130-201ENST00000221554 CCL18P55774 89 aa14.57□□□□□ -0.08
CCDC130-201ENST00000221554 DAD1P61803 113 aa14.57□□□□□ -0.08
CCDC130-201ENST00000221554 Q6Q795 121 aa14.56□□□□□ -0.08
CCDC130-201ENST00000221554 CITED1Q99966 193 aa14.56□□□□□ -0.08
CCDC130-201ENST00000221554 NOTCH3Q9UM47 2321 aa14.56□□□□□ -0.08
CCDC130-201ENST00000221554 IGKV2-28A0A075B6P5 120 aa14.55□□□□□ -0.08
CCDC130-201ENST00000221554 IGKV2D-28P01615 120 aa14.55□□□□□ -0.08
CCDC130-201ENST00000221554 CXCL5P42830 114 aa14.55□□□□□ -0.08
CCDC130-201ENST00000221554 XCL1P47992 114 aa14.55□□□□□ -0.08
CCDC130-201ENST00000221554 STAB1Q9NY15 2570 aa14.55□□□□□ -0.08
CCDC130-201ENST00000221554 ATP5G1P05496 136 aa14.55□□□□□ -0.08
CCDC130-201ENST00000221554 DEFB135Q30KP9 77 aa14.55□□□□□ -0.08
CCDC130-201ENST00000221554 CD164L2Q6UWJ8 174 aa14.55□□□□□ -0.08
CCDC130-201ENST00000221554 LINC00337Q8N6G1 96 aa14.55□□□□□ -0.08
CCDC130-201ENST00000221554 IGHV4-28A0A0C4DH34 117 aa14.54□□□□□ -0.08
CCDC130-201ENST00000221554 BAALC-AS2P0C853 105 aa14.54□□□□□ -0.08
CCDC130-201ENST00000221554 PFN2P35080 140 aa14.52□□□□□ -0.08
CCDC130-201ENST00000221554 GAGE2BQ13066 116 aa14.52□□□□□ -0.08
CCDC130-201ENST00000221554 COX17Q14061 63 aa14.52□□□□□ -0.08
CCDC130-201ENST00000221554 GAGE2EQ4V326 116 aa14.52□□□□□ -0.08
CCDC130-201ENST00000221554 GAGE2DQ9UEU5 116 aa14.52□□□□□ -0.08
CCDC130-201ENST00000221554 SPART-AS1P0CW21 52 aa14.52□□□□□ -0.09
CCDC130-201ENST00000221554 WFDC9Q8NEX5 89 aa14.52□□□□□ -0.09
CCDC130-201ENST00000221554 WIPF1O43516 503 aa14.51□□□□□ -0.09
CCDC130-201ENST00000221554 SMIM11BQ8TCY0 68 aa14.5□□□□□ -0.09
CCDC130-201ENST00000221554 C15orf53Q8NAA6 179 aa14.5□□□□□ -0.09
CCDC130-201ENST00000221554 Q8NAQ8 132 aa14.5□□□□□ -0.09
CCDC130-201ENST00000221554 INAFM2P0DMQ5 153 aa14.49□□□□□ -0.09
CCDC130-201ENST00000221554 CFAP161Q6P656 301 aa14.49□□□□□ -0.09
CCDC130-201ENST00000221554 LINC00269Q8N2A0 174 aa14.49□□□□□ -0.09
CCDC130-201ENST00000221554 A0A096LPF7 62 aa14.48□□□□□ -0.09
CCDC130-201ENST00000221554 DNAL4O96015 105 aa14.48□□□□□ -0.09
CCDC130-201ENST00000221554 SPATA3Q8NHX4 192 aa14.47□□□□□ -0.09
CCDC130-201ENST00000221554 MUC7Q8TAX7 377 aa14.47□□□□□ -0.09
CCDC130-201ENST00000221554 FAM218AQ96MZ4 157 aa14.47□□□□□ -0.09
CCDC130-201ENST00000221554 ANGP03950 147 aaKnown RBP14.47□□□□□ -0.09
CCDC130-201ENST00000221554 REG3AQ06141 175 aa14.47□□□□□ -0.09
CCDC130-201ENST00000221554 CHCHD10Q8WYQ3 142 aaPredicted RBP14.47□□□□□ -0.09
CCDC130-201ENST00000221554 NDUFC2O95298 119 aa14.46□□□□□ -0.09
CCDC130-201ENST00000221554 LELP1Q5T871 98 aa14.46□□□□□ -0.09
CCDC130-201ENST00000221554 MALP21145 153 aa14.45□□□□□ -0.1
CCDC130-201ENST00000221554 DEFB4AO15263 64 aa14.44□□□□□ -0.1
CCDC130-201ENST00000221554 KIAA0087Q14695 138 aa14.44□□□□□ -0.1
CCDC130-201ENST00000221554 CLPSL2Q6UWE3 100 aa14.44□□□□□ -0.1
CCDC130-201ENST00000221554 OR13C6PQ8NH95 151 aa14.44□□□□□ -0.1
CCDC130-201ENST00000221554 C11orf68Q9H3H3 251 aaKnown RBP14.42□□□□□ -0.1
CCDC130-201ENST00000221554 KRTAP24-1Q3LI83 254 aa14.42□□□□□ -0.1
CCDC130-201ENST00000221554 TTC32Q5I0X7 151 aa14.42□□□□□ -0.1
CCDC130-201ENST00000221554 KLK5Q9Y337 293 aaPredicted RBP14.42□□□□□ -0.1
CCDC130-201ENST00000221554 A0A1B0GX51 115 aa14.41□□□□□ -0.1
CCDC130-201ENST00000221554 ANAPC13Q9BS18 74 aa14.41□□□□□ -0.1
CCDC130-201ENST00000221554 IGHV4-30-4P0DP06 118 aa14.4□□□□□ -0.1
CCDC130-201ENST00000221554 CELA1Q9UNI1 258 aa14.4□□□□□ -0.1
CCDC130-201ENST00000221554 IMUPQ9GZP8 106 aa14.39□□□□□ -0.11
CCDC130-201ENST00000221554 Q9HAA7 133 aa14.38□□□□□ -0.11
CCDC130-201ENST00000221554 C22orf24Q9Y442 160 aa14.38□□□□□ -0.11
CCDC130-201ENST00000221554 TMEM126AQ9H061 195 aa14.37□□□□□ -0.11
CCDC130-201ENST00000221554 A0A087WYN8 130 aa14.37□□□□□ -0.11
CCDC130-201ENST00000221554 TRBV7-7A0A0K0K1E9 115 aa14.37□□□□□ -0.11
CCDC130-201ENST00000221554 NDUFV3P56181 108 aaKnown RBP14.36□□□□□ -0.11
CCDC130-201ENST00000221554 LINC00643Q86TS7 51 aa14.36□□□□□ -0.11
CCDC130-201ENST00000221554 PRR34Q9NV39 138 aa14.35□□□□□ -0.11
CCDC130-201ENST00000221554 VWFP04275 2813 aa14.35□□□□□ -0.11
CCDC130-201ENST00000221554 H3BNG1 76 aa14.34□□□□□ -0.11
CCDC130-201ENST00000221554 IGLV10-54A0A075B6I4 117 aa14.34□□□□□ -0.11
CCDC130-201ENST00000221554 SDIM1Q6ZPB5 146 aa14.34□□□□□ -0.11
CCDC130-201ENST00000221554 LECT2O14960 151 aa14.33□□□□□ -0.12
CCDC130-201ENST00000221554 HTN3P15516 51 aa14.33□□□□□ -0.12
CCDC130-201ENST00000221554 OBSCN-AS1Q96MR7 158 aa14.33□□□□□ -0.12
CCDC130-201ENST00000221554 MDFIQ99750 246 aa14.32□□□□□ -0.12
CCDC130-201ENST00000221554 ORMDL1Q9P0S3 153 aa14.32□□□□□ -0.12
CCDC130-201ENST00000221554 A0A0J9YWU9 116 aa14.31□□□□□ -0.12
CCDC130-201ENST00000221554 SPAG11BQ08648 103 aa14.3□□□□□ -0.12
CCDC130-201ENST00000221554 LINC00167Q96N53 147 aa14.3□□□□□ -0.12
CCDC130-201ENST00000221554 LYPD5Q6UWN5 251 aa14.29□□□□□ -0.12
CCDC130-201ENST00000221554 PKD1L1Q8TDX9 2849 aa14.28□□□□□ -0.12
CCDC130-201ENST00000221554 GVQW2A0A096LPI5 108 aaPredicted RBP14.28□□□□□ -0.12
CCDC130-201ENST00000221554 Q8N3U1 123 aa14.28□□□□□ -0.12
CCDC130-201ENST00000221554 KLK12Q9UKR0 248 aa14.27□□□□□ -0.12
CCDC130-201ENST00000221554 GAGE2AQ6NT46 116 aa14.27□□□□□ -0.13
CCDC130-201ENST00000221554 TRRAPQ9Y4A5 3859 aa14.26□□□□□ -0.13
CCDC130-201ENST00000221554 ANK2Q01484 3957 aa14.26□□□□□ -0.13
CCDC130-201ENST00000221554 NANOS2P60321 138 aaKnown RBP14.26□□□□□ -0.13
CCDC130-201ENST00000221554 NHLRC4P0CG21 123 aaPredicted RBP14.25□□□□□ -0.13
CCDC130-201ENST00000221554 ENHOQ6UWT2 76 aa14.24□□□□□ -0.13
CCDC130-201ENST00000221554 Q8N814 137 aa14.24□□□□□ -0.13
CCDC130-201ENST00000221554 JMJD7-PLA2G4BH0Y9G9 81 aa14.24□□□□□ -0.13
CCDC130-201ENST00000221554 TMEM256-PLSCR3K7ERE1 68 aa14.24□□□□□ -0.13
CCDC130-201ENST00000221554 S100A7L2Q5SY68 101 aa14.24□□□□□ -0.13
CCDC130-201ENST00000221554 UNQ6190/PRO20217Q6UXQ8 127 aa14.23□□□□□ -0.13
CCDC130-201ENST00000221554 C9orf116Q5BN46 136 aaPredicted RBP14.22□□□□□ -0.13
CCDC130-201ENST00000221554 SMCR5Q8TEV8 140 aa14.22□□□□□ -0.13
CCDC130-201ENST00000221554 PRR3P79522 188 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms