RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CCL24O00175 119 aa11.27□□□□□ -0.61
SF3A2-201ENST00000221494 PRM2P04554 102 aa11.27□□□□□ -0.61
SF3A2-201ENST00000221494 GAGE2AQ6NT46 116 aa11.27□□□□□ -0.61
SF3A2-201ENST00000221494 COX7B2Q8TF08 81 aa11.27□□□□□ -0.61
SF3A2-201ENST00000221494 NIPBLQ6KC79 2804 aaeCLIP11.27□□□□□ -0.619e-8■□□□□ 8.9
SF3A2-201ENST00000221494 C2CD3Q4AC94 2353 aa11.26□□□□□ -0.61
SF3A2-201ENST00000221494 UBE2L6O14933 153 aa11.26□□□□□ -0.61
SF3A2-201ENST00000221494 KRTAP10-3P60369 221 aa11.26□□□□□ -0.61
SF3A2-201ENST00000221494 SND1-IT1Q9HBX3 110 aa11.26□□□□□ -0.61
SF3A2-201ENST00000221494 TRGV1A0A0A0MS02 117 aa11.25□□□□□ -0.61
SF3A2-201ENST00000221494 IBA57-AS1B1ANH7 110 aa11.25□□□□□ -0.61
SF3A2-201ENST00000221494 C2orf48Q96LS8 159 aa11.25□□□□□ -0.61
SF3A2-201ENST00000221494 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
SF3A2-201ENST00000221494 LINC00337Q8N6G1 96 aa11.24□□□□□ -0.61
SF3A2-201ENST00000221494 SORL1Q92673 2214 aa11.23□□□□□ -0.61
SF3A2-201ENST00000221494 IGKV2-28A0A075B6P5 120 aa11.23□□□□□ -0.61
SF3A2-201ENST00000221494 IGKV2D-28P01615 120 aa11.23□□□□□ -0.61
SF3A2-201ENST00000221494 RPL35AP18077 110 aaKnown RBP11.23□□□□□ -0.61
SF3A2-201ENST00000221494 MIR7-3HGQ8N6C7 128 aa11.23□□□□□ -0.61
SF3A2-201ENST00000221494 KLK5Q9Y337 293 aaPredicted RBP11.23□□□□□ -0.61
SF3A2-201ENST00000221494 RPL18AQ02543 176 aaKnown RBP11.23□□□□□ -0.61
SF3A2-201ENST00000221494 C4orf26Q17RF5 130 aa11.23□□□□□ -0.61
SF3A2-201ENST00000221494 STHQ8IWL8 128 aa11.23□□□□□ -0.61
SF3A2-201ENST00000221494 SMIM11BQ8TCY0 68 aa11.22□□□□□ -0.61
SF3A2-201ENST00000221494 CMC4P56277 68 aaPredicted RBP11.21□□□□□ -0.61
SF3A2-201ENST00000221494 XCL2Q9UBD3 114 aa11.21□□□□□ -0.61
SF3A2-201ENST00000221494 TRBV6-4A0A1B0GX49 114 aa11.21□□□□□ -0.62
SF3A2-201ENST00000221494 ODF3L2Q3SX64 289 aa11.21□□□□□ -0.62
SF3A2-201ENST00000221494 Q9HAA7 133 aa11.21□□□□□ -0.62
SF3A2-201ENST00000221494 JMJD1CQ15652 2540 aa11.2□□□□□ -0.62
SF3A2-201ENST00000221494 HRCT1Q6UXD1 115 aa11.2□□□□□ -0.62
SF3A2-201ENST00000221494 S100A7L2Q5SY68 101 aa11.19□□□□□ -0.62
SF3A2-201ENST00000221494 Q6ZTI0 123 aa11.19□□□□□ -0.62
SF3A2-201ENST00000221494 LINC00336Q6ZUF6 198 aa11.19□□□□□ -0.62
SF3A2-201ENST00000221494 A0A087WZ39 114 aa11.18□□□□□ -0.62
SF3A2-201ENST00000221494 CCL18P55774 89 aa11.18□□□□□ -0.62
SF3A2-201ENST00000221494 ATP5EP2Q5VTU8 51 aa11.18□□□□□ -0.62
SF3A2-201ENST00000221494 C16orf74Q96GX8 76 aa11.18□□□□□ -0.62
SF3A2-201ENST00000221494 WNK1Q9H4A3 2382 aa11.18□□□□□ -0.62
SF3A2-201ENST00000221494 A0A087WYN8 130 aa11.17□□□□□ -0.62
SF3A2-201ENST00000221494 IGHV3OR16-9A0A0B4J2B5 98 aa11.17□□□□□ -0.62
SF3A2-201ENST00000221494 LINC00158P58513 81 aa11.17□□□□□ -0.62
SF3A2-201ENST00000221494 Q5XG85 94 aa11.17□□□□□ -0.62
SF3A2-201ENST00000221494 SERP2Q8N6R1 65 aa11.17□□□□□ -0.62
SF3A2-201ENST00000221494 TMEM258P61165 79 aa11.17□□□□□ -0.62
SF3A2-201ENST00000221494 LINC00167Q96N53 147 aa11.17□□□□□ -0.62
SF3A2-201ENST00000221494 LINC01561Q8N1V8 128 aa11.16□□□□□ -0.62
SF3A2-201ENST00000221494 C3orf56Q8N813 242 aa11.16□□□□□ -0.62
SF3A2-201ENST00000221494 TENM1Q9UKZ4 2725 aa11.15□□□□□ -0.62
SF3A2-201ENST00000221494 TEP1Q99973 2627 aaKnown RBP11.15□□□□□ -0.62
SF3A2-201ENST00000221494 C1orf195Q5TG92 126 aa11.15□□□□□ -0.62
SF3A2-201ENST00000221494 C14orf132Q9NPU4 83 aa11.15□□□□□ -0.62
SF3A2-201ENST00000221494 ORMDL1Q9P0S3 153 aa11.15□□□□□ -0.62
SF3A2-201ENST00000221494 JMJD7-PLA2G4BH0Y9G9 81 aa11.14□□□□□ -0.63
SF3A2-201ENST00000221494 LINC00846Q9NV44 126 aa11.14□□□□□ -0.63
SF3A2-201ENST00000221494 PKIGQ9Y2B9 76 aa11.13□□□□□ -0.63
SF3A2-201ENST00000221494 TRBV6-8A0A0A6YYG3 113 aa11.12□□□□□ -0.63
SF3A2-201ENST00000221494 LECT2O14960 151 aa11.12□□□□□ -0.63
SF3A2-201ENST00000221494 CCKP06307 115 aa11.12□□□□□ -0.63
SF3A2-201ENST00000221494 TOMM7Q9P0U1 55 aa11.12□□□□□ -0.63
SF3A2-201ENST00000221494 C4orf48Q5BLP8 95 aa11.11□□□□□ -0.63
SF3A2-201ENST00000221494 LINC00482Q8N8I6 264 aa11.11□□□□□ -0.63
SF3A2-201ENST00000221494 NOP10Q9NPE3 64 aaKnown RBP11.11□□□□□ -0.63
SF3A2-201ENST00000221494 ATRQ13535 2644 aa11.11□□□□□ -0.63
SF3A2-201ENST00000221494 PLAC8L1A1L4L8 177 aa11.1□□□□□ -0.63
SF3A2-201ENST00000221494 IGLV1-51P01701 117 aa11.1□□□□□ -0.63
SF3A2-201ENST00000221494 UPK3BQ9BT76 320 aa11.1□□□□□ -0.63
SF3A2-201ENST00000221494 PAX4O43316 350 aa11.1□□□□□ -0.63
SF3A2-201ENST00000221494 MAST4O15021 2626 aa11.09□□□□□ -0.63
SF3A2-201ENST00000221494 TRGV2A0A075B6R0 118 aa11.09□□□□□ -0.63
SF3A2-201ENST00000221494 TRBV10-3A0A0K0K1G6 114 aa11.09□□□□□ -0.63
SF3A2-201ENST00000221494 VWFP04275 2813 aa11.09□□□□□ -0.63
SF3A2-201ENST00000221494 USP17L23D6RBM5 183 aa11.08□□□□□ -0.64
SF3A2-201ENST00000221494 NDUFC2O95298 119 aa11.08□□□□□ -0.64
SF3A2-201ENST00000221494 C9orf129Q5T035 196 aaKnown RBP11.08□□□□□ -0.64
SF3A2-201ENST00000221494 Q8IZM0 81 aa11.08□□□□□ -0.64
SF3A2-201ENST00000221494 TRGV4A0A0C4DH28 118 aa11.08□□□□□ -0.64
SF3A2-201ENST00000221494 hADV29S1A0JD25 119 aa11.08□□□□□ -0.64
SF3A2-201ENST00000221494 IGKV3D-7A0A0C4DH55 119 aa11.07□□□□□ -0.64
SF3A2-201ENST00000221494 NDUFC2-KCTD14E9PQ53 114 aa11.07□□□□□ -0.64
SF3A2-201ENST00000221494 TMEM256-PLSCR3K7ERE1 68 aa11.07□□□□□ -0.64
SF3A2-201ENST00000221494 LYPD5Q6UWN5 251 aa11.07□□□□□ -0.64
SF3A2-201ENST00000221494 IGLV4-60A0A075B6I1 120 aa11.07□□□□□ -0.64
SF3A2-201ENST00000221494 LINC00959A0A1B0GUT2 108 aa11.07□□□□□ -0.64
SF3A2-201ENST00000221494 BCE1O60756 84 aa11.07□□□□□ -0.64
SF3A2-201ENST00000221494 SS18Q15532 418 aa11.07□□□□□ -0.64
SF3A2-201ENST00000221494 KRTAP24-1Q3LI83 254 aa11.07□□□□□ -0.64
SF3A2-201ENST00000221494 FAM19A1Q7Z5A9 133 aa11.07□□□□□ -0.64
SF3A2-201ENST00000221494 NCR3O14931 201 aa11.06□□□□□ -0.64
SF3A2-201ENST00000221494 COX17Q14061 63 aa11.06□□□□□ -0.64
SF3A2-201ENST00000221494 DPH3Q96FX2 82 aa11.06□□□□□ -0.64
SF3A2-201ENST00000221494 FBN1P35555 2871 aaKnown RBP11.05□□□□□ -0.64
SF3A2-201ENST00000221494 GIG44P09565 113 aaPredicted RBP11.05□□□□□ -0.64
SF3A2-201ENST00000221494 SPATA3Q8NHX4 192 aa11.05□□□□□ -0.64
SF3A2-201ENST00000221494 FAM236DA0A1B0GTK5 79 aa11.05□□□□□ -0.64
SF3A2-201ENST00000221494 A0A1B0GUV1 79 aa11.05□□□□□ -0.64
SF3A2-201ENST00000221494 FAM236CP0DP71 79 aa11.05□□□□□ -0.64
SF3A2-201ENST00000221494 PFN2P35080 140 aa11.05□□□□□ -0.64
SF3A2-201ENST00000221494 FHL2Q14192 279 aa11.05□□□□□ -0.64
SF3A2-201ENST00000221494 LOC100131303A0A0U1RQF7 123 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms