RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 TMEM126AQ9H061 195 aa12.1□□□□□ -0.47
PTPN18-201ENST00000175756 F8P00451 2351 aa12.1□□□□□ -0.47
PTPN18-201ENST00000175756 TRAV23DV6A0A075B6W5 121 aa12.1□□□□□ -0.47
PTPN18-201ENST00000175756 LINC00959A0A1B0GUT2 108 aa12.1□□□□□ -0.47
PTPN18-201ENST00000175756 TRBV6-4A0A1B0GX49 114 aa12.1□□□□□ -0.47
PTPN18-201ENST00000175756 UQCRQO14949 82 aa12.1□□□□□ -0.47
PTPN18-201ENST00000175756 IBA57-AS1B1ANH7 110 aa12.09□□□□□ -0.47
PTPN18-201ENST00000175756 RPL28P46779 137 aaKnown RBP12.09□□□□□ -0.47
PTPN18-201ENST00000175756 CXCL5P42830 114 aa12.09□□□□□ -0.47
PTPN18-201ENST00000175756 ATOX1O00244 68 aa12.09□□□□□ -0.47
PTPN18-201ENST00000175756 DEFB135Q30KP9 77 aa12.09□□□□□ -0.47
PTPN18-201ENST00000175756 LINC00482Q8N8I6 264 aa12.09□□□□□ -0.47
PTPN18-201ENST00000175756 CSDC2Q9Y534 153 aaKnown RBP12.09□□□□□ -0.47
PTPN18-201ENST00000175756 LRRC75A-AS1Q8N1F1 130 aa12.08□□□□□ -0.48
PTPN18-201ENST00000175756 CSMD2Q7Z408 3487 aa12.08□□□□□ -0.48
PTPN18-201ENST00000175756 UBR5O95071 2799 aaPredicted RBP12.08□□□□□ -0.48
PTPN18-201ENST00000175756 UBL5Q9BZL1 73 aa12.07□□□□□ -0.48
PTPN18-201ENST00000175756 LINC00846Q9NV44 126 aa12.07□□□□□ -0.48
PTPN18-201ENST00000175756 TRBV7-7A0A0K0K1E9 115 aa12.07□□□□□ -0.48
PTPN18-201ENST00000175756 DAD1P61803 113 aa12.07□□□□□ -0.48
PTPN18-201ENST00000175756 LINC01006Q8NI28 216 aa12.07□□□□□ -0.48
PTPN18-201ENST00000175756 IMUPQ9GZP8 106 aa12.07□□□□□ -0.48
PTPN18-201ENST00000175756 NIPBLQ6KC79 2804 aaeCLIP12.07□□□□□ -0.48
PTPN18-201ENST00000175756 IGKV2-28A0A075B6P5 120 aa12.06□□□□□ -0.48
PTPN18-201ENST00000175756 LOC107984640A0A0U1RRK4 108 aa12.06□□□□□ -0.48
PTPN18-201ENST00000175756 IGKV2D-28P01615 120 aa12.06□□□□□ -0.48
PTPN18-201ENST00000175756 ZNF843Q8N446 348 aa12.06□□□□□ -0.48
PTPN18-201ENST00000175756 C6orf99Q4VX62 202 aa12.05□□□□□ -0.48
PTPN18-201ENST00000175756 FAM222AQ5U5X8 452 aa12.05□□□□□ -0.48
PTPN18-201ENST00000175756 A8MTW9 85 aa12.05□□□□□ -0.48
PTPN18-201ENST00000175756 VPS13CQ709C8 3753 aa12.04□□□□□ -0.48
PTPN18-201ENST00000175756 FHL2Q14192 279 aa12.04□□□□□ -0.48
PTPN18-201ENST00000175756 C9orf129Q5T035 196 aaKnown RBP12.04□□□□□ -0.48
PTPN18-201ENST00000175756 IGHV3OR16-9A0A0B4J2B5 98 aa12.04□□□□□ -0.48
PTPN18-201ENST00000175756 RPL18AQ02543 176 aaKnown RBP12.03□□□□□ -0.48
PTPN18-201ENST00000175756 ENHOQ6UWT2 76 aa12.03□□□□□ -0.48
PTPN18-201ENST00000175756 A0A087WZ39 114 aa12.02□□□□□ -0.48
PTPN18-201ENST00000175756 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.48
PTPN18-201ENST00000175756 PRO0255Q9UI72 69 aa12.02□□□□□ -0.48
PTPN18-201ENST00000175756 CHCHD10Q8WYQ3 142 aaPredicted RBP12.02□□□□□ -0.49
PTPN18-201ENST00000175756 COX7CP15954 63 aa12.02□□□□□ -0.49
PTPN18-201ENST00000175756 KLK12Q9UKR0 248 aa12.02□□□□□ -0.49
PTPN18-201ENST00000175756 USP17L23D6RBM5 183 aa12.01□□□□□ -0.49
PTPN18-201ENST00000175756 XAGE1AQ9HD64 81 aa12□□□□□ -0.49
PTPN18-201ENST00000175756 SETXQ7Z333 2677 aaKnown RBP12□□□□□ -0.49
PTPN18-201ENST00000175756 GHRHP01286 108 aa12□□□□□ -0.49
PTPN18-201ENST00000175756 DEFB121Q5J5C9 76 aa12□□□□□ -0.49
PTPN18-201ENST00000175756 MGAM2Q2M2H8 2515 aa11.99□□□□□ -0.49
PTPN18-201ENST00000175756 MAST4O15021 2626 aa11.99□□□□□ -0.49
PTPN18-201ENST00000175756 UNC79Q9P2D8 2635 aa11.99□□□□□ -0.49
PTPN18-201ENST00000175756 REG3AQ06141 175 aa11.99□□□□□ -0.49
PTPN18-201ENST00000175756 Q8N3U1 123 aa11.99□□□□□ -0.49
PTPN18-201ENST00000175756 SPAG11BQ08648 103 aa11.99□□□□□ -0.49
PTPN18-201ENST00000175756 HILS1P60008 231 aa11.98□□□□□ -0.49
PTPN18-201ENST00000175756 A0A096LNT2 108 aa11.98□□□□□ -0.49
PTPN18-201ENST00000175756 TMEM256-PLSCR3K7ERE1 68 aa11.97□□□□□ -0.49
PTPN18-201ENST00000175756 DSCR8Q96T75 97 aa11.97□□□□□ -0.49
PTPN18-201ENST00000175756 C20orf197Q8N268 126 aa11.97□□□□□ -0.49
PTPN18-201ENST00000175756 SCXQ7RTU7 201 aa11.97□□□□□ -0.49
PTPN18-201ENST00000175756 JMJD7-PLA2G4BH0Y9G9 81 aa11.96□□□□□ -0.49
PTPN18-201ENST00000175756 J3KT08 172 aa11.96□□□□□ -0.5
PTPN18-201ENST00000175756 RBM3P98179 157 aaKnown RBP11.95□□□□□ -0.5
PTPN18-201ENST00000175756 SVIPQ8NHG7 77 aa11.95□□□□□ -0.5
PTPN18-201ENST00000175756 FAM19A1Q7Z5A9 133 aa11.95□□□□□ -0.5
PTPN18-201ENST00000175756 UNQ6190/PRO20217Q6UXQ8 127 aa11.95□□□□□ -0.5
PTPN18-201ENST00000175756 IGLV1-51P01701 117 aa11.94□□□□□ -0.5
PTPN18-201ENST00000175756 C6orf223Q8N319 242 aa11.94□□□□□ -0.5
PTPN18-201ENST00000175756 SMR3AQ99954 134 aa11.94□□□□□ -0.5
PTPN18-201ENST00000175756 FAM110AQ9BQ89 295 aa11.94□□□□□ -0.5
PTPN18-201ENST00000175756 FSHBP01225 129 aa11.94□□□□□ -0.5
PTPN18-201ENST00000175756 NBEAL1Q6ZS30 2694 aa11.94□□□□□ -0.5
PTPN18-201ENST00000175756 GIG44P09565 113 aaPredicted RBP11.93□□□□□ -0.5
PTPN18-201ENST00000175756 ZNF561-AS1K7EIQ3 104 aa11.93□□□□□ -0.5
PTPN18-201ENST00000175756 HIGD2BQ4VC39 106 aa11.92□□□□□ -0.5
PTPN18-201ENST00000175756 SERP2Q8N6R1 65 aa11.92□□□□□ -0.5
PTPN18-201ENST00000175756 UPK3BQ9BT76 320 aa11.92□□□□□ -0.5
PTPN18-201ENST00000175756 Q8N814 137 aa11.92□□□□□ -0.5
PTPN18-201ENST00000175756 J3QKU1 62 aa11.91□□□□□ -0.5
PTPN18-201ENST00000175756 APCP25054 2843 aa11.91□□□□□ -0.5
PTPN18-201ENST00000175756 Q6ZQY7 126 aa11.91□□□□□ -0.5
PTPN18-201ENST00000175756 CR1P17927 2039 aa11.91□□□□□ -0.5
PTPN18-201ENST00000175756 Q8IZM0 81 aa11.91□□□□□ -0.5
PTPN18-201ENST00000175756 Q6JHZ5 121 aa11.9□□□□□ -0.51
PTPN18-201ENST00000175756 CD164L2Q6UWJ8 174 aa11.9□□□□□ -0.51
PTPN18-201ENST00000175756 DEFB105AQ8NG35 78 aa11.9□□□□□ -0.51
PTPN18-201ENST00000175756 CCKP06307 115 aa11.89□□□□□ -0.51
PTPN18-201ENST00000175756 PLAC8L1A1L4L8 177 aa11.88□□□□□ -0.51
PTPN18-201ENST00000175756 KIR2DL5BQ8NHK3 375 aa11.87□□□□□ -0.51
PTPN18-201ENST00000175756 NOTCH1P46531 2555 aa11.86□□□□□ -0.51
PTPN18-201ENST00000175756 CYSRT1A8MQ03 144 aa11.86□□□□□ -0.51
PTPN18-201ENST00000175756 LINC01600Q96MT4 127 aa11.86□□□□□ -0.51
PTPN18-201ENST00000175756 CAMK2N2Q96S95 79 aa11.86□□□□□ -0.51
PTPN18-201ENST00000175756 FAM19A5Q7Z5A7 132 aaPredicted RBP11.85□□□□□ -0.51
PTPN18-201ENST00000175756 IL17DQ8TAD2 202 aa11.85□□□□□ -0.51
PTPN18-201ENST00000175756 IGHV4-28A0A0C4DH34 117 aa11.84□□□□□ -0.51
PTPN18-201ENST00000175756 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
PTPN18-201ENST00000175756 APOC4P55056 127 aa11.83□□□□□ -0.51
PTPN18-201ENST00000175756 SNURFQ9Y675 71 aa11.83□□□□□ -0.51
PTPN18-201ENST00000175756 SPART-AS1P0CW21 52 aa11.82□□□□□ -0.52
PTPN18-201ENST00000175756 FAM19A3Q7Z5A8 133 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms