RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 LST1O00453 97 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 MALP21145 153 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 CXCL5P42830 114 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 CFAP161Q6P656 301 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 CD164L2Q6UWJ8 174 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 CHCHD10Q8WYQ3 142 aaPredicted RBP5.7□□□□□ -1.5
VAMP3-201ENST00000054666 CLEC2BQ92478 149 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 SND1-IT1Q9HBX3 110 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 TRRAPQ9Y4A5 3859 aa5.69□□□□□ -1.5
VAMP3-201ENST00000054666 GAGE12HA6NDE8 117 aa5.69□□□□□ -1.5
VAMP3-201ENST00000054666 H3BT86 120 aa5.69□□□□□ -1.5
VAMP3-201ENST00000054666 PFN2P35080 140 aa5.69□□□□□ -1.5
VAMP3-201ENST00000054666 CKS1BP61024 79 aa5.69□□□□□ -1.5
VAMP3-201ENST00000054666 C21orf62-AS1Q17RA5 79 aa5.68□□□□□ -1.5
VAMP3-201ENST00000054666 C2orf82Q6UX34 121 aa5.68□□□□□ -1.5
VAMP3-201ENST00000054666 SPATA25Q9BR10 227 aa5.68□□□□□ -1.5
VAMP3-201ENST00000054666 TENM1Q9UKZ4 2725 aa5.68□□□□□ -1.5
VAMP3-201ENST00000054666 IGLV10-54A0A075B6I4 117 aa5.68□□□□□ -1.5
VAMP3-201ENST00000054666 KRTAP10-11P60412 298 aa5.68□□□□□ -1.5
VAMP3-201ENST00000054666 EGFEM1PQ0D2K5 195 aa5.68□□□□□ -1.5
VAMP3-201ENST00000054666 NTN5Q8WTR8 489 aaPredicted RBP5.67□□□□□ -1.5
VAMP3-201ENST00000054666 UBE2WQ96B02 151 aa5.67□□□□□ -1.5
VAMP3-201ENST00000054666 CARD19Q96LW7 228 aa5.67□□□□□ -1.5
VAMP3-201ENST00000054666 SIGMAR1Q99720 223 aa5.67□□□□□ -1.5
VAMP3-201ENST00000054666 RETNQ9HD89 108 aa5.67□□□□□ -1.5
VAMP3-201ENST00000054666 Q8N3U1 123 aa5.67□□□□□ -1.5
VAMP3-201ENST00000054666 LINC01600Q96MT4 127 aa5.67□□□□□ -1.5
VAMP3-201ENST00000054666 CCL18P55774 89 aa5.66□□□□□ -1.5
VAMP3-201ENST00000054666 NBEAL2Q6ZNJ1 2754 aa5.66□□□□□ -1.5
VAMP3-201ENST00000054666 H3BNG1 76 aa5.66□□□□□ -1.5
VAMP3-201ENST00000054666 RPL28P46779 137 aaKnown RBP5.65□□□□□ -1.5
VAMP3-201ENST00000054666 LINC00337Q8N6G1 96 aa5.65□□□□□ -1.5
VAMP3-201ENST00000054666 KLK12Q9UKR0 248 aa5.65□□□□□ -1.5
VAMP3-201ENST00000054666 IGKV2-28A0A075B6P5 120 aa5.64□□□□□ -1.51
VAMP3-201ENST00000054666 IGKV2D-28P01615 120 aa5.64□□□□□ -1.51
VAMP3-201ENST00000054666 TRACP01848 142 aa5.64□□□□□ -1.51
VAMP3-201ENST00000054666 COX17Q14061 63 aa5.64□□□□□ -1.51
VAMP3-201ENST00000054666 KPRPQ5T749 579 aaPredicted RBP5.64□□□□□ -1.51
VAMP3-201ENST00000054666 SPAG11BQ08648 103 aa5.64□□□□□ -1.51
VAMP3-201ENST00000054666 LYPD5Q6UWN5 251 aa5.64□□□□□ -1.51
VAMP3-201ENST00000054666 Q6ZTC4 211 aa5.64□□□□□ -1.51
VAMP3-201ENST00000054666 OR13C6PQ8NH95 151 aa5.64□□□□□ -1.51
VAMP3-201ENST00000054666 TEX49A0A1B0GTD5 131 aa5.63□□□□□ -1.51
VAMP3-201ENST00000054666 KIAA0087Q14695 138 aa5.63□□□□□ -1.51
VAMP3-201ENST00000054666 PRR34Q9NV39 138 aa5.63□□□□□ -1.51
VAMP3-201ENST00000054666 TRAV8-4A0A0B4J246 113 aa5.62□□□□□ -1.51
VAMP3-201ENST00000054666 DNAL4O96015 105 aa5.62□□□□□ -1.51
VAMP3-201ENST00000054666 SCGB1A1P11684 91 aa5.62□□□□□ -1.51
VAMP3-201ENST00000054666 MUC7Q8TAX7 377 aa5.62□□□□□ -1.51
VAMP3-201ENST00000054666 SMIM11BQ8TCY0 68 aa5.62□□□□□ -1.51
VAMP3-201ENST00000054666 KLK5Q9Y337 293 aaPredicted RBP5.62□□□□□ -1.51
VAMP3-201ENST00000054666 FLNBO75369 2602 aaKnown RBP5.62□□□□□ -1.51
VAMP3-201ENST00000054666 A0A0J9YWU9 116 aa5.62□□□□□ -1.51
VAMP3-201ENST00000054666 H0YGX0 51 aa5.62□□□□□ -1.51
VAMP3-201ENST00000054666 CDIP1Q9H305 208 aa5.62□□□□□ -1.51
VAMP3-201ENST00000054666 C11orf45Q8TAV5 145 aa5.61□□□□□ -1.51
VAMP3-201ENST00000054666 NDUFC2O95298 119 aa5.6□□□□□ -1.51
VAMP3-201ENST00000054666 ENHOQ6UWT2 76 aa5.6□□□□□ -1.51
VAMP3-201ENST00000054666 WFDC10BQ8IUB3 73 aa5.6□□□□□ -1.51
VAMP3-201ENST00000054666 CMYA5Q8N3K9 4069 aa5.6□□□□□ -1.51
VAMP3-201ENST00000054666 DEFB131BA0A096LNP1 70 aa5.6□□□□□ -1.51
VAMP3-201ENST00000054666 FAM218AQ96MZ4 157 aa5.6□□□□□ -1.51
VAMP3-201ENST00000054666 NANOS2P60321 138 aaKnown RBP5.59□□□□□ -1.51
VAMP3-201ENST00000054666 BAALC-AS2P0C853 105 aa5.59□□□□□ -1.52
VAMP3-201ENST00000054666 C9orf116Q5BN46 136 aaPredicted RBP5.59□□□□□ -1.52
VAMP3-201ENST00000054666 CYSRT1A8MQ03 144 aa5.58□□□□□ -1.52
VAMP3-201ENST00000054666 XGP55808 180 aa5.58□□□□□ -1.52
VAMP3-201ENST00000054666 UNQ6190/PRO20217Q6UXQ8 127 aa5.58□□□□□ -1.52
VAMP3-201ENST00000054666 TMEM126AQ9H061 195 aa5.58□□□□□ -1.52
VAMP3-201ENST00000054666 A0A087WYN8 130 aa5.58□□□□□ -1.52
VAMP3-201ENST00000054666 FAM240AA0A1B0GVK7 77 aa5.58□□□□□ -1.52
VAMP3-201ENST00000054666 DEFB121Q5J5C9 76 aa5.58□□□□□ -1.52
VAMP3-201ENST00000054666 C6orf223Q8N319 242 aa5.58□□□□□ -1.52
VAMP3-201ENST00000054666 Q9HAA7 133 aa5.58□□□□□ -1.52
VAMP3-201ENST00000054666 GVQW2A0A096LPI5 108 aaPredicted RBP5.57□□□□□ -1.52
VAMP3-201ENST00000054666 ZNF561-AS1K7EIQ3 104 aa5.57□□□□□ -1.52
VAMP3-201ENST00000054666 MT-ATP8P03928 68 aa5.57□□□□□ -1.52
VAMP3-201ENST00000054666 INAFM2P0DMQ5 153 aa5.57□□□□□ -1.52
VAMP3-201ENST00000054666 ESRGQ1W209 222 aa5.57□□□□□ -1.52
VAMP3-201ENST00000054666 S100A7L2Q5SY68 101 aa5.57□□□□□ -1.52
VAMP3-201ENST00000054666 LINC00526Q96FQ7 95 aa5.57□□□□□ -1.52
VAMP3-201ENST00000054666 ANK2Q01484 3957 aa5.57□□□□□ -1.52
VAMP3-201ENST00000054666 NCR3O14931 201 aa5.56□□□□□ -1.52
VAMP3-201ENST00000054666 LECT2O14960 151 aa5.56□□□□□ -1.52
VAMP3-201ENST00000054666 SNCGO76070 127 aa5.56□□□□□ -1.52
VAMP3-201ENST00000054666 LINC01556Q5JQF7 62 aa5.56□□□□□ -1.52
VAMP3-201ENST00000054666 C10orf25Q5T742 122 aa5.56□□□□□ -1.52
VAMP3-201ENST00000054666 C1orf43Q9BWL3 253 aa5.56□□□□□ -1.52
VAMP3-201ENST00000054666 KRTAP3-3Q9BYR6 98 aa5.56□□□□□ -1.52
VAMP3-201ENST00000054666 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
VAMP3-201ENST00000054666 C15orf53Q8NAA6 179 aa5.56□□□□□ -1.52
VAMP3-201ENST00000054666 DNAH3Q8TD57 4116 aa5.56□□□□□ -1.52
VAMP3-201ENST00000054666 TRAV10A0A0B4J240 114 aa5.55□□□□□ -1.52
VAMP3-201ENST00000054666 CAMK2N2Q96S95 79 aa5.55□□□□□ -1.52
VAMP3-201ENST00000054666 MAST4O15021 2626 aa5.55□□□□□ -1.52
VAMP3-201ENST00000054666 STAB1Q9NY15 2570 aa5.55□□□□□ -1.52
VAMP3-201ENST00000054666 A0A1B0GX51 115 aa5.55□□□□□ -1.52
VAMP3-201ENST00000054666 ACYP1P07311 99 aa5.55□□□□□ -1.52
VAMP3-201ENST00000054666 PRR3P79522 188 aaKnown RBP5.55□□□□□ -1.52
VAMP3-201ENST00000054666 HIGD2BQ4VC39 106 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms