RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 6030452D12RikQ8CD33 222 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Cmtm2bQ9DAC0 210 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Cst10Q9JM84 148 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Trappc2lQ9JME7 139 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Arid1bE9Q4N7 2244 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Ankhd1E9PUR0 2548 aaKnown RBP11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gm15557A6PWY0 234 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gm10803Q3TZS6 135 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gm27027S4R1M6 97 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 LrbaQ9ESE1 2856 aa11.61□□□□□ -0.55
Nup88-202ENSMUST00000108530 V1rd19Q3KNP5 305 aa11.61□□□□□ -0.55
Nup88-202ENSMUST00000108530 C130073F10RikQ8C4L8 201 aa11.61□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr1323Q8VF35 309 aa11.61□□□□□ -0.55
Nup88-202ENSMUST00000108530 Cldn16Q925N4 235 aa11.61□□□□□ -0.55
Nup88-202ENSMUST00000108530 Tmem52Q9D702 196 aa11.61□□□□□ -0.55
Nup88-202ENSMUST00000108530 HeylQ9DBX7 326 aa11.61□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr779E9PUS9 130 aa11.61□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gm21060J3KMU4 56 aa11.61□□□□□ -0.55
Nup88-202ENSMUST00000108530 SrstQ06666 185 aa11.61□□□□□ -0.55
Nup88-202ENSMUST00000108530 Rbm7Q9CQT2 265 aaKnown RBP11.61□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gm21913J3KML9 361 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gm21776J3QPJ5 361 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Mamld1P0C6A2 803 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 MgpP19788 104 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 RanP62827 216 aaKnown RBP11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 GchfrP99025 84 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Slamf7Q8BHK6 333 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Slc36a4Q8CH36 500 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Klre1Q8CJC7 226 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Cox19Q8K0C8 92 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 TdhQ8K3F7 373 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Rgs13Q8K443 158 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Nus1Q99LJ8 297 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Nicn1Q9CQM0 213 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Crybb3Q9JJU9 211 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Ankrd17Q99NH0 2603 aaKnown RBP11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gm5819E9PZ96 154 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Bst1Q64277 311 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Rasl11aQ6IMB1 242 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Pitpnc1Q8K4R4 332 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr715Q8VG49 315 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Necap2Q9D1J1 266 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Tmem210Q9D2F0 147 aa11.6□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr1024A2ASU7 327 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 H2al1jA2BFR3 109 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Evi2aP20934 223 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Ccl6P27784 116 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Znf329Q6GQR8 522 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Vmn1r46Q9EQ45 309 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Ighv3-1A0A075B5S6 116 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Ighv1-58A0A075B5W9 117 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 BsgP18572 389 aaKnown RBP11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gsx1P31315 261 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Rplp1P47955 114 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 F7P70375 446 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Vmn1r195Q5SVD6 316 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Nbl1Q61477 178 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 2810408A11RikQ6NSU2 435 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gm17334Q8C6U3 126 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Rnf2Q9CQJ4 336 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gpr35Q9ES90 307 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Pf4Q9Z126 105 aa11.59□□□□□ -0.55
Nup88-202ENSMUST00000108530 Trav6n-5A0A075B621 112 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 Trav6-5A0A075B6B5 112 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 Zfp114B2RRA8 586 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 Gm17727E9Q4V7 109 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 Gm21834J3QN05 151 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 P01643 108 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 Phxr2P15972 65 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 Cd3eP22646 189 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 SeleQ00690 612 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 Znf664Q4VA44 261 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 Gng5Q80SZ7 68 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1413Q8VGU3 323 aa11.58□□□□□ -0.56
Nup88-202ENSMUST00000108530 Trbv3A0A0A6YYE2 117 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Gm42420A0A0J9YUQ2 99 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Rnf212bD3Z423 297 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Nat8f7E0CYR6 227 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr624F8VQI7 308 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 TymsP07607 307 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Reg1P43137 165 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Ctdsp1P58466 261 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Minos1Q7TNS2 76 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1246Q7TQZ6 314 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Mpv17lQ99MS3 194 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Q9CX25 107 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Slc25a39Q9D8K8 359 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Cxcr6Q9EQ16 351 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Nf1Q04690 2841 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Trav9d-1A0A075B699 112 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Zfp109A0A0U1RPC5 652 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1436A0PK57 315 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Smad7O35253 426 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Defa-rs1P17533 116 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Fabp6P51162 128 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Pfn1P62962 140 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1475Q8VEV6 314 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Pard6aQ9Z101 346 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 ApomQ9Z1R3 190 aa11.57□□□□□ -0.56
Nup88-202ENSMUST00000108530 Gcn1E9PVA8 2671 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms