RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Ms4a12A0A087WSB9 263 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Igkv6-15A0A140T8M5 115 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Olfr1185-ps1F6XP16 303 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Cd96Q3U0X8 602 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 3100002H09RikQ9CXW6 140 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Tmem190Q9D2E9 166 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Ncoa6Q9JL19 2067 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 1700084M14RikB1AT01 78 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Olfr218E9PWV2 313 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Dkk1O54908 272 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 PigyP0C1P0 71 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Sub1P11031 127 aaKnown RBP7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 P18532 116 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Ypel4Q65Z93 127 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 OstcQ78XF5 149 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Spata45Q9CVW4 97 aa7.74□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Cspg4Q8VHY0 2327 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Mmp23O88676 391 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 EpopQ7TNS8 369 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Smim19Q80ZU4 107 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Vmn1r202Q8R259 302 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Ufc1Q9CR09 167 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Prr23a3Q9CWP9 254 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Frem2Q6NVD0 3160 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Arf6P62331 175 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Znf691Q3TDE8 283 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Gm6899Q3USS0 134 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Foxc2Q61850 494 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Emp2O88662 172 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Icam2P35330 277 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 SrstQ06666 185 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Hoxc12Q8K5B8 280 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Hyls1Q9CXX0 307 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 F5O88783 2183 aa7.73□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Ighv5-12-4A0A0A6YWG4 117 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Ighv9-1A0A0B4J1P3 117 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Gm20458E9PXJ7 78 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Bst1Q64277 311 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Ccsmst1Q6RUT7 136 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Elovl5Q8BHI7 299 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Tmem116A0A0G2JGD3 401 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 D930048N14RikA2AA67 225 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Gm6034E9Q101 117 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Gm21913J3KML9 361 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Gm21776J3QPJ5 361 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Col8a1Q00780 744 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Gm10803Q3TZS6 135 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Rpp25lQ99JH1 163 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Ndufb3Q9CQZ6 104 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Tmem167aQ9CR64 72 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Fancd2osQ9D4K4 178 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Spcs1Q9D958 161 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Fabp6P51162 128 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Clec4b2Q67DU8 208 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Vmn1r62Q8R2C0 300 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Siglec12Q91Y57 467 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Tmem189Q99LQ7 271 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Gpr35Q9ES90 307 aa7.72□□□□□ -1.17
Col6a1-201ENSMUST00000001147 P01728 117 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Rev3lQ61493 3122 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Ighv5-9A0A075B5Q2 117 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 BC053393A0A0B4J1F6 192 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Olfr1192-ps1A0A1L1SRD7 309 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Olfr1331K7N684 317 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 RprmlQ3URD2 117 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Fbxl7Q5BJ29 491 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Jpt2Q6PGH2 190 aaKnown RBP7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Olfr1419Q7TQS2 343 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Olfr1333Q7TQV7 317 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 MavsQ8VCF0 503 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Olfr1012Q8VFJ7 311 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Leprotl1Q9CQ74 131 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Tmem126aQ9D8Y1 196 aa7.71□□□□□ -1.17
Col6a1-201ENSMUST00000001147 Plcxd2B2RXA1 340 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Thap8E9Q695 213 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Vmn1r60G3UY47 300 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Hoxb2P0C1T1 354 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Znf260Q62513 407 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Znf329Q6GQR8 522 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Anapc13Q8R034 74 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 RpeQ8VEE0 228 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Olfr1431Q8VF59 312 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Olfr984Q8VFN1 314 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 GrhprQ91Z53 328 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Gatad1Q920S3 266 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 ManfQ9CXI5 179 aaKnown RBP7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 ChtopQ9CY57 249 aaKnown RBP7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Q9D8L0 127 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Tcf20Q9EPQ8 1987 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Trav9-1A0A075B601 112 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Tmem238A9JSM3 176 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Scgb1b24B1B0N6 92 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Tm4sf19E9Q9H8 206 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Cnn3Q9DAW9 330 aaKnown RBP7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Bhlha15Q9QYC3 197 aa7.71□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Ighv14-3A0A075B5R9 117 aa7.7□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Trav7n-4A0A075B620 113 aa7.7□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Gm10020E9QAZ2 204 aa7.7□□□□□ -1.18
Col6a1-201ENSMUST00000001147 P01659 112 aa7.7□□□□□ -1.18
Col6a1-201ENSMUST00000001147 Znf146Q8BQN6 292 aa7.7□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms