RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 PRO0255Q9UI72 69 aa12.49□□□□□ -0.41
PHGDH-226ENST00000641756 FLNBO75369 2602 aaKnown RBP12.49□□□□□ -0.41
PHGDH-226ENST00000641756 NDUFA1O15239 70 aa12.49□□□□□ -0.41
PHGDH-226ENST00000641756 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
PHGDH-226ENST00000641756 F5H768 121 aa12.48□□□□□ -0.41
PHGDH-226ENST00000641756 Q9H8V8 135 aa12.47□□□□□ -0.41
PHGDH-226ENST00000641756 CELA1Q9UNI1 258 aa12.47□□□□□ -0.41
PHGDH-226ENST00000641756 WIPF1O43516 503 aa12.47□□□□□ -0.41
PHGDH-226ENST00000641756 MTURNQ8N3F0 131 aa12.47□□□□□ -0.41
PHGDH-226ENST00000641756 DAND5Q8N907 189 aa12.47□□□□□ -0.41
PHGDH-226ENST00000641756 ZNF625Q96I27 306 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-226ENST00000641756 SPANXDQ9BXN6 97 aa12.47□□□□□ -0.41
PHGDH-226ENST00000641756 SPANXCQ9NY87 97 aa12.47□□□□□ -0.41
PHGDH-226ENST00000641756 PAX4O43316 350 aa12.46□□□□□ -0.41
PHGDH-226ENST00000641756 MIAQ16674 131 aa12.46□□□□□ -0.41
PHGDH-226ENST00000641756 KRTAP24-1Q3LI83 254 aa12.46□□□□□ -0.41
PHGDH-226ENST00000641756 Q8NAQ8 132 aa12.46□□□□□ -0.41
PHGDH-226ENST00000641756 DAD1P61803 113 aa12.46□□□□□ -0.42
PHGDH-226ENST00000641756 OXLD1Q5BKU9 147 aa12.46□□□□□ -0.42
PHGDH-226ENST00000641756 H7C2G1 150 aa12.45□□□□□ -0.42
PHGDH-226ENST00000641756 RNF151Q2KHN1 245 aa12.45□□□□□ -0.42
PHGDH-226ENST00000641756 A0A0B4J2C4 111 aa12.44□□□□□ -0.42
PHGDH-226ENST00000641756 RBX1P62877 108 aa12.44□□□□□ -0.42
PHGDH-226ENST00000641756 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-226ENST00000641756 A0A0U1RRA0 63 aa12.44□□□□□ -0.42
PHGDH-226ENST00000641756 PSMB2P49721 201 aa12.44□□□□□ -0.42
PHGDH-226ENST00000641756 TMEM262E9PQX1 116 aa12.43□□□□□ -0.42
PHGDH-226ENST00000641756 IGHV3-33P01772 117 aa12.43□□□□□ -0.42
PHGDH-226ENST00000641756 MIFP14174 115 aa12.43□□□□□ -0.42
PHGDH-226ENST00000641756 WFDC2Q14508 124 aa12.43□□□□□ -0.42
PHGDH-226ENST00000641756 RNF183Q96D59 192 aa12.43□□□□□ -0.42
PHGDH-226ENST00000641756 TIMM17BO60830 172 aa12.43□□□□□ -0.42
PHGDH-226ENST00000641756 CBY1Q9Y3M2 126 aa12.42□□□□□ -0.42
PHGDH-226ENST00000641756 PRIMA1Q86XR5 153 aa12.41□□□□□ -0.42
PHGDH-226ENST00000641756 ERG28Q9UKR5 140 aa12.41□□□□□ -0.42
PHGDH-226ENST00000641756 F8W1H4 67 aa12.41□□□□□ -0.42
PHGDH-226ENST00000641756 KRTAP10-11P60412 298 aa12.41□□□□□ -0.42
PHGDH-226ENST00000641756 K7ERU9 68 aa12.4□□□□□ -0.42
PHGDH-226ENST00000641756 PRO0461Q9UI25 63 aa12.4□□□□□ -0.42
PHGDH-226ENST00000641756 TRAV26-1A0A087WT03 109 aa12.4□□□□□ -0.43
PHGDH-226ENST00000641756 TCL1BO95988 128 aa12.4□□□□□ -0.43
PHGDH-226ENST00000641756 SCGB1C2P0DMR2 95 aa12.4□□□□□ -0.43
PHGDH-226ENST00000641756 HTN3P15516 51 aa12.4□□□□□ -0.43
PHGDH-226ENST00000641756 CIRBPQ14011 172 aaKnown RBP12.4□□□□□ -0.43
PHGDH-226ENST00000641756 Q1RN00 199 aa12.4□□□□□ -0.43
PHGDH-226ENST00000641756 ATP5G1P05496 136 aa12.39□□□□□ -0.43
PHGDH-226ENST00000641756 SPART-AS1P0CW21 52 aa12.38□□□□□ -0.43
PHGDH-226ENST00000641756 MEIG1Q5JSS6 88 aa12.38□□□□□ -0.43
PHGDH-226ENST00000641756 LYRM7Q5U5X0 104 aa12.38□□□□□ -0.43
PHGDH-226ENST00000641756 CLPSL2Q6UWE3 100 aa12.38□□□□□ -0.43
PHGDH-226ENST00000641756 TOMM7Q9P0U1 55 aa12.38□□□□□ -0.43
PHGDH-226ENST00000641756 IGHV3OR16-9A0A0B4J2B5 98 aa12.38□□□□□ -0.43
PHGDH-226ENST00000641756 LINC00959A0A1B0GUT2 108 aa12.38□□□□□ -0.43
PHGDH-226ENST00000641756 C5orf38Q86SI9 138 aa12.37□□□□□ -0.43
PHGDH-226ENST00000641756 C3orf56Q8N813 242 aa12.37□□□□□ -0.43
PHGDH-226ENST00000641756 COX7B2Q8TF08 81 aa12.37□□□□□ -0.43
PHGDH-226ENST00000641756 TEX48A0A1B0GUV7 120 aa12.37□□□□□ -0.43
PHGDH-226ENST00000641756 IFITM1P13164 125 aa12.37□□□□□ -0.43
PHGDH-226ENST00000641756 SH2D6Q7Z4S9 175 aa12.37□□□□□ -0.43
PHGDH-226ENST00000641756 LINC00308Q8TCZ7 52 aa12.36□□□□□ -0.43
PHGDH-226ENST00000641756 RETNQ9HD89 108 aa12.36□□□□□ -0.43
PHGDH-226ENST00000641756 A0A1B0GUV1 79 aa12.35□□□□□ -0.43
PHGDH-226ENST00000641756 FBN1P35555 2871 aaKnown RBP12.35□□□□□ -0.43
PHGDH-226ENST00000641756 ETDBQ3ZM63 59 aa12.35□□□□□ -0.43
PHGDH-226ENST00000641756 Q8N3U1 123 aa12.35□□□□□ -0.43
PHGDH-226ENST00000641756 XCL1P47992 114 aa12.34□□□□□ -0.43
PHGDH-226ENST00000641756 HERV-K104P63124 156 aa12.34□□□□□ -0.43
PHGDH-226ENST00000641756 A0A087WZ39 114 aa12.34□□□□□ -0.43
PHGDH-226ENST00000641756 SMCPP49901 116 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-226ENST00000641756 SOSTDC1Q6X4U4 206 aa12.34□□□□□ -0.43
PHGDH-226ENST00000641756 VPS25Q9BRG1 176 aa12.34□□□□□ -0.43
PHGDH-226ENST00000641756 TRBV20-1A0A075B6N2 111 aa12.33□□□□□ -0.44
PHGDH-226ENST00000641756 G3V4G9 280 aa12.33□□□□□ -0.44
PHGDH-226ENST00000641756 SS18Q15532 418 aa12.32□□□□□ -0.44
PHGDH-226ENST00000641756 TRIAP1O43715 76 aa12.31□□□□□ -0.44
PHGDH-226ENST00000641756 LINC00269Q8N2A0 174 aa12.31□□□□□ -0.44
PHGDH-226ENST00000641756 CMYA5Q8N3K9 4069 aa12.31□□□□□ -0.44
PHGDH-226ENST00000641756 RPL13AP40429 203 aaKnown RBP12.31□□□□□ -0.44
PHGDH-226ENST00000641756 CYSRT1A8MQ03 144 aa12.3□□□□□ -0.44
PHGDH-226ENST00000641756 SHISA2Q6UWI4 295 aa12.3□□□□□ -0.44
PHGDH-226ENST00000641756 ICOSQ9Y6W8 199 aa12.3□□□□□ -0.44
PHGDH-226ENST00000641756 STAB1Q9NY15 2570 aa12.3□□□□□ -0.44
PHGDH-226ENST00000641756 EGFEM1PQ0D2K5 195 aa12.29□□□□□ -0.44
PHGDH-226ENST00000641756 MRPL23Q16540 153 aaKnown RBP12.29□□□□□ -0.44
PHGDH-226ENST00000641756 C11orf68Q9H3H3 251 aaKnown RBP12.29□□□□□ -0.44
PHGDH-226ENST00000641756 TRBV30A0A0K0K1B3 111 aa12.29□□□□□ -0.44
PHGDH-226ENST00000641756 ANGP03950 147 aaKnown RBP12.28□□□□□ -0.44
PHGDH-226ENST00000641756 IGLV10-54A0A075B6I4 117 aa12.26□□□□□ -0.45
PHGDH-226ENST00000641756 MIR7-3HGQ8N6C7 128 aa12.26□□□□□ -0.45
PHGDH-226ENST00000641756 COPS9Q8WXC6 57 aa12.26□□□□□ -0.45
PHGDH-226ENST00000641756 ANK2Q01484 3957 aa12.25□□□□□ -0.45
PHGDH-226ENST00000641756 LINC00158P58513 81 aa12.25□□□□□ -0.45
PHGDH-226ENST00000641756 REG3AQ06141 175 aa12.25□□□□□ -0.45
PHGDH-226ENST00000641756 C6orf226Q5I0X4 101 aa12.25□□□□□ -0.45
PHGDH-226ENST00000641756 PKD1L1Q8TDX9 2849 aa12.25□□□□□ -0.45
PHGDH-226ENST00000641756 C9JAW5 83 aa12.24□□□□□ -0.45
PHGDH-226ENST00000641756 ATXN8Q156A1 80 aa12.24□□□□□ -0.45
PHGDH-226ENST00000641756 LELP1Q5T871 98 aa12.24□□□□□ -0.45
PHGDH-226ENST00000641756 CHCHD10Q8WYQ3 142 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-226ENST00000641756 PFN2P35080 140 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms