RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	HERVK_113	P63121	156 aa		7.87	□□□□□ -1.15
GFAP-238	ENST00000640859	SRSF9	Q13242	221 aa	Known RBP eCLIP	7.87	□□□□□ -1.15
GFAP-238	ENST00000640859	C10orf126	Q8N4M7	172 aa		7.87	□□□□□ -1.15
GFAP-238	ENST00000640859		Q8NAQ8	132 aa		7.87	□□□□□ -1.15
GFAP-238	ENST00000640859	TMEM101	Q96IK0	257 aa		7.87	□□□□□ -1.15
GFAP-238	ENST00000640859	NAA38	Q9BRA0	125 aa	Known RBP	7.87	□□□□□ -1.15
GFAP-238	ENST00000640859	CDKN2A-AS1	Q9UH64	79 aa		7.87	□□□□□ -1.15
GFAP-238	ENST00000640859	PRO0255	Q9UI72	69 aa		7.87	□□□□□ -1.15
GFAP-238	ENST00000640859		A0A0J9YXY3	114 aa		7.86	□□□□□ -1.15
GFAP-238	ENST00000640859		A0A1W2PPM0	123 aa		7.86	□□□□□ -1.15
GFAP-238	ENST00000640859		A8MZ25	164 aa		7.86	□□□□□ -1.15
GFAP-238	ENST00000640859	IGLL5	B9A064	214 aa		7.86	□□□□□ -1.15
GFAP-238	ENST00000640859	GYPE	P15421	78 aa		7.86	□□□□□ -1.15
GFAP-238	ENST00000640859	GAGE6	Q13070	117 aa		7.86	□□□□□ -1.15
GFAP-238	ENST00000640859	ATP6V0E2	Q8NHE4	81 aa		7.86	□□□□□ -1.15
GFAP-238	ENST00000640859	IGLV5-39	A0A0G2JS06	123 aa		7.85	□□□□□ -1.15
GFAP-238	ENST00000640859	DEFB4A	O15263	64 aa		7.85	□□□□□ -1.15
GFAP-238	ENST00000640859	NHLRC4	P0CG21	123 aa	Predicted RBP	7.85	□□□□□ -1.15
GFAP-238	ENST00000640859	TRAV13-1	A0A0B4J241	112 aa		7.84	□□□□□ -1.15
GFAP-238	ENST00000640859	GAGE10	A6NGK3	116 aa		7.84	□□□□□ -1.15
GFAP-238	ENST00000640859		K7EP34	96 aa		7.84	□□□□□ -1.15
GFAP-238	ENST00000640859	PAX4	O43316	350 aa		7.84	□□□□□ -1.15
GFAP-238	ENST00000640859	ZFAND6	Q6FIF0	208 aa		7.84	□□□□□ -1.15
GFAP-238	ENST00000640859	B9D2	Q9BPU9	175 aa		7.84	□□□□□ -1.15
GFAP-238	ENST00000640859	NDUFA12	Q9UI09	145 aa		7.84	□□□□□ -1.15
GFAP-238	ENST00000640859	CELA1	Q9UNI1	258 aa		7.84	□□□□□ -1.15
GFAP-238	ENST00000640859	IGLV4-60	A0A075B6I1	120 aa		7.83	□□□□□ -1.16
GFAP-238	ENST00000640859		F5H768	121 aa		7.83	□□□□□ -1.16
GFAP-238	ENST00000640859	FABP2	P12104	132 aa		7.83	□□□□□ -1.16
GFAP-238	ENST00000640859	DAD1	P61803	113 aa		7.83	□□□□□ -1.16
GFAP-238	ENST00000640859	GTF2H5	Q6ZYL4	71 aa		7.83	□□□□□ -1.16
GFAP-238	ENST00000640859	LITAF	Q99732	161 aa		7.83	□□□□□ -1.16
GFAP-238	ENST00000640859	TMEM238	C9JI98	176 aa		7.82	□□□□□ -1.16
GFAP-238	ENST00000640859	SPART-AS1	P0CW21	52 aa		7.82	□□□□□ -1.16
GFAP-238	ENST00000640859	SPATA25	Q9BR10	227 aa		7.82	□□□□□ -1.16
GFAP-238	ENST00000640859	CHCHD5	Q9BSY4	110 aa		7.82	□□□□□ -1.16
GFAP-238	ENST00000640859	SMIM1	B2RUZ4	78 aa		7.81	□□□□□ -1.16
GFAP-238	ENST00000640859	NDUFA1	O15239	70 aa		7.81	□□□□□ -1.16
GFAP-238	ENST00000640859	TIMM17B	O60830	172 aa		7.81	□□□□□ -1.16
GFAP-238	ENST00000640859	ATP5G1	P05496	136 aa		7.81	□□□□□ -1.16
GFAP-238	ENST00000640859	MUSTN1	Q8IVN3	82 aa		7.81	□□□□□ -1.16
GFAP-238	ENST00000640859	SPANXD	Q9BXN6	97 aa		7.81	□□□□□ -1.16
GFAP-238	ENST00000640859	SPANXC	Q9NY87	97 aa		7.81	□□□□□ -1.16
GFAP-238	ENST00000640859	SPCS1	Q9Y6A9	102 aa		7.81	□□□□□ -1.16
GFAP-238	ENST00000640859	CFC1B	P0CG36	223 aa		7.8	□□□□□ -1.16
GFAP-238	ENST00000640859	CFC1	P0CG37	223 aa		7.8	□□□□□ -1.16
GFAP-238	ENST00000640859	TRAV26-1	A0A087WT03	109 aa		7.79	□□□□□ -1.16
GFAP-238	ENST00000640859		A0A1B0GUV1	79 aa		7.79	□□□□□ -1.16
GFAP-238	ENST00000640859		A4D1N5	150 aa		7.79	□□□□□ -1.16
GFAP-238	ENST00000640859	APOM	O95445	188 aa		7.79	□□□□□ -1.16
GFAP-238	ENST00000640859	RPL24	P83731	157 aa	Known RBP	7.79	□□□□□ -1.16
GFAP-238	ENST00000640859	ADAMTSL4-AS1	Q5T5F5	129 aa		7.79	□□□□□ -1.16
GFAP-238	ENST00000640859	TEX48	A0A1B0GUV7	120 aa		7.78	□□□□□ -1.16
GFAP-238	ENST00000640859	RBX1	P62877	108 aa		7.78	□□□□□ -1.16
GFAP-238	ENST00000640859		A0A096LPF7	62 aa		7.77	□□□□□ -1.17
GFAP-238	ENST00000640859	IGHV3OR16-9	A0A0B4J2B5	98 aa		7.77	□□□□□ -1.17
GFAP-238	ENST00000640859	LINC00959	A0A1B0GUT2	108 aa		7.77	□□□□□ -1.17
GFAP-238	ENST00000640859	TSPAN13	O95857	204 aa		7.77	□□□□□ -1.17
GFAP-238	ENST00000640859	MIA	Q16674	131 aa		7.77	□□□□□ -1.17
GFAP-238	ENST00000640859	ZNF625	Q96I27	306 aa	Predicted RBP	7.77	□□□□□ -1.17
GFAP-238	ENST00000640859	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	7.76	□□□□□ -1.17
GFAP-238	ENST00000640859		A0A0B4J2C4	111 aa		7.76	□□□□□ -1.17
GFAP-238	ENST00000640859	TMEM262	E9PQX1	116 aa		7.76	□□□□□ -1.17
GFAP-238	ENST00000640859	MRPL23	Q16540	153 aa	Known RBP	7.76	□□□□□ -1.17
GFAP-238	ENST00000640859		Q9H8V8	135 aa		7.76	□□□□□ -1.17
GFAP-238	ENST00000640859	RETN	Q9HD89	108 aa		7.76	□□□□□ -1.17
GFAP-238	ENST00000640859	PRO1854	Q9UHT4	67 aa		7.76	□□□□□ -1.17
GFAP-238	ENST00000640859	IGKV3OR2-268	A0A0C4DH90	116 aa		7.75	□□□□□ -1.17
GFAP-238	ENST00000640859	IFITM1	P13164	125 aa		7.75	□□□□□ -1.17
GFAP-238	ENST00000640859	SH2D6	Q7Z4S9	175 aa		7.75	□□□□□ -1.17
GFAP-238	ENST00000640859		A0A087WZ39	114 aa		7.74	□□□□□ -1.17
GFAP-238	ENST00000640859	IGHV3-33	P01772	117 aa		7.74	□□□□□ -1.17
GFAP-238	ENST00000640859	PRSS2	P07478	247 aa		7.74	□□□□□ -1.17
GFAP-238	ENST00000640859	HTN3	P15516	51 aa		7.74	□□□□□ -1.17
GFAP-238	ENST00000640859	HERV-K104	P63124	156 aa		7.74	□□□□□ -1.17
GFAP-238	ENST00000640859	COX7B2	Q8TF08	81 aa		7.74	□□□□□ -1.17
GFAP-238	ENST00000640859	TM2D3	Q9BRN9	247 aa		7.74	□□□□□ -1.17
GFAP-238	ENST00000640859	ICOS	Q9Y6W8	199 aa		7.74	□□□□□ -1.17
GFAP-238	ENST00000640859	NBEAL2	Q6ZNJ1	2754 aa		7.74	□□□□□ -1.17
GFAP-238	ENST00000640859	CMYA5	Q8N3K9	4069 aa		7.73	□□□□□ -1.17
GFAP-238	ENST00000640859	CIRBP	Q14011	172 aa	Known RBP	7.73	□□□□□ -1.17
GFAP-238	ENST00000640859	SS18	Q15532	418 aa		7.73	□□□□□ -1.17
GFAP-238	ENST00000640859	LINC01561	Q8N1V8	128 aa		7.73	□□□□□ -1.17
GFAP-238	ENST00000640859	LELP1	Q5T871	98 aa		7.72	□□□□□ -1.17
GFAP-238	ENST00000640859	C11orf68	Q9H3H3	251 aa	Known RBP	7.72	□□□□□ -1.17
GFAP-238	ENST00000640859	ERG28	Q9UKR5	140 aa		7.72	□□□□□ -1.17
GFAP-238	ENST00000640859	C5orf38	Q86SI9	138 aa		7.71	□□□□□ -1.18
GFAP-238	ENST00000640859	LINC00308	Q8TCZ7	52 aa		7.71	□□□□□ -1.18
GFAP-238	ENST00000640859	PPDPF	Q9H3Y8	114 aa		7.71	□□□□□ -1.18
GFAP-238	ENST00000640859	LOC107984156	A0A0G2JMH3	177 aa		7.7	□□□□□ -1.18
GFAP-238	ENST00000640859		H3BNG1	76 aa		7.7	□□□□□ -1.18
GFAP-238	ENST00000640859	NPC2	P61916	151 aa		7.7	□□□□□ -1.18
GFAP-238	ENST00000640859	LYRM7	Q5U5X0	104 aa		7.7	□□□□□ -1.18
GFAP-238	ENST00000640859	ARL17A	Q8IVW1	177 aa		7.7	□□□□□ -1.18
GFAP-238	ENST00000640859	DAND5	Q8N907	189 aa		7.7	□□□□□ -1.18
GFAP-238	ENST00000640859	PRO0461	Q9UI25	63 aa		7.7	□□□□□ -1.18
GFAP-238	ENST00000640859	TG	P01266	2768 aa		7.69	□□□□□ -1.18
GFAP-238	ENST00000640859		H3BMG7	143 aa		7.69	□□□□□ -1.18
GFAP-238	ENST00000640859	XCL1	P47992	114 aa		7.69	□□□□□ -1.18
GFAP-238	ENST00000640859	MEIG1	Q5JSS6	88 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms