RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 SCXQ7RTU7 201 aa17.13■□□□□ 0.33
VEGFA-231ENST00000640499 C18orf32Q8TCD1 76 aa17.13■□□□□ 0.33
VEGFA-231ENST00000640499 SMCO4Q9NRQ5 59 aa17.13■□□□□ 0.33
VEGFA-231ENST00000640499 VPS13BQ7Z7G8 4022 aa17.12■□□□□ 0.33
VEGFA-231ENST00000640499 COX6A2Q02221 97 aa17.12■□□□□ 0.33
VEGFA-231ENST00000640499 LINC00242Q5T6M2 205 aa17.12■□□□□ 0.33
VEGFA-231ENST00000640499 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-231ENST00000640499 NPSP0C0P6 89 aa17.11■□□□□ 0.33
VEGFA-231ENST00000640499 UBE2D1P51668 147 aa17.11■□□□□ 0.33
VEGFA-231ENST00000640499 CHAC1Q9BUX1 264 aa17.11■□□□□ 0.33
VEGFA-231ENST00000640499 TEX43Q6ZNM6 134 aa17.1■□□□□ 0.33
VEGFA-231ENST00000640499 CIRBP-AS1Q8TBR5 109 aa17.1■□□□□ 0.33
VEGFA-231ENST00000640499 TIMM17AQ99595 171 aa17.09■□□□□ 0.33
VEGFA-231ENST00000640499 IGHV3-64A0A075B6Q5 118 aa17.08■□□□□ 0.32
VEGFA-231ENST00000640499 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.08■□□□□ 0.32
VEGFA-231ENST00000640499 MALP21145 153 aa17.08■□□□□ 0.32
VEGFA-231ENST00000640499 G0S2P27469 103 aa17.08■□□□□ 0.32
VEGFA-231ENST00000640499 FA2HQ7L5A8 372 aa17.08■□□□□ 0.32
VEGFA-231ENST00000640499 VCX2Q9H322 139 aa17.08■□□□□ 0.32
VEGFA-231ENST00000640499 IGLV4-69A0A075B6H9 119 aa17.07■□□□□ 0.32
VEGFA-231ENST00000640499 A0A096LNJ9 63 aa17.07■□□□□ 0.32
VEGFA-231ENST00000640499 ERASQ7Z444 233 aa17.07■□□□□ 0.32
VEGFA-231ENST00000640499 CIRBPQ14011 172 aaKnown RBP17.05■□□□□ 0.32
VEGFA-231ENST00000640499 Q6ZN92 141 aa17.05■□□□□ 0.32
VEGFA-231ENST00000640499 SCGB3A1Q96QR1 104 aa17.05■□□□□ 0.32
VEGFA-231ENST00000640499 LINC00614P0C842 121 aa17.04■□□□□ 0.32
VEGFA-231ENST00000640499 CHTF8P0CG12 524 aa17.04■□□□□ 0.32
VEGFA-231ENST00000640499 FAM19A3Q7Z5A8 133 aa17.04■□□□□ 0.32
VEGFA-231ENST00000640499 EPM2AB3EWF7 344 aa17.03■□□□□ 0.32
VEGFA-231ENST00000640499 ZNF561-AS1K7EIQ3 104 aa17.03■□□□□ 0.32
VEGFA-231ENST00000640499 Q5VSD8 79 aa17.03■□□□□ 0.32
VEGFA-231ENST00000640499 C2orf88Q9BSF0 95 aa17.03■□□□□ 0.32
VEGFA-231ENST00000640499 A0A087WZ39 114 aa17.02■□□□□ 0.32
VEGFA-231ENST00000640499 SYCNQ0VAF6 134 aa17.01■□□□□ 0.31
VEGFA-231ENST00000640499 COLCA2A8K830 154 aa17■□□□□ 0.31
VEGFA-231ENST00000640499 APOMO95445 188 aa17■□□□□ 0.31
VEGFA-231ENST00000640499 Q6ZRU5 148 aa17■□□□□ 0.31
VEGFA-231ENST00000640499 CARD19Q96LW7 228 aa17■□□□□ 0.31
VEGFA-231ENST00000640499 SPAG11BQ08648 103 aa16.99■□□□□ 0.31
VEGFA-231ENST00000640499 ORAOV1Q8WV07 137 aa16.99■□□□□ 0.31
VEGFA-231ENST00000640499 PMCHL1Q16048 86 aa16.98■□□□□ 0.31
VEGFA-231ENST00000640499 PAPPA-AS1Q5QFB9 102 aa16.98■□□□□ 0.31
VEGFA-231ENST00000640499 OR10D4PQ8NGN7 298 aa16.98■□□□□ 0.31
VEGFA-231ENST00000640499 SPACA4Q8TDM5 124 aa16.98■□□□□ 0.31
VEGFA-231ENST00000640499 C2orf48Q96LS8 159 aa16.98■□□□□ 0.31
VEGFA-231ENST00000640499 A0A0J9YXV3 536 aa16.97■□□□□ 0.31
VEGFA-231ENST00000640499 LINC01549A6NIU2 74 aa16.97■□□□□ 0.31
VEGFA-231ENST00000640499 KIAA0087Q14695 138 aa16.97■□□□□ 0.31
VEGFA-231ENST00000640499 SRRM2Q9UQ35 2752 aaKnown RBP16.96■□□□□ 0.31
VEGFA-231ENST00000640499 TRGC2P03986 189 aa16.96■□□□□ 0.31
VEGFA-231ENST00000640499 LINC00528Q8N1L1 170 aa16.96■□□□□ 0.31
VEGFA-231ENST00000640499 CAMK2N2Q96S95 79 aa16.95■□□□□ 0.3
VEGFA-231ENST00000640499 CST9LQ9H4G1 147 aa16.95■□□□□ 0.3
VEGFA-231ENST00000640499 A0A096LNI7 61 aa16.94■□□□□ 0.3
VEGFA-231ENST00000640499 PDZD11Q5EBL8 140 aa16.94■□□□□ 0.3
VEGFA-231ENST00000640499 LINC01561Q8N1V8 128 aa16.94■□□□□ 0.3
VEGFA-231ENST00000640499 FAM229AH3BQW9 127 aa16.93■□□□□ 0.3
VEGFA-231ENST00000640499 SCO1O75880 301 aa16.93■□□□□ 0.3
VEGFA-231ENST00000640499 C10orf25Q5T742 122 aa16.93■□□□□ 0.3
VEGFA-231ENST00000640499 CDKN2A-AS1Q9UH64 79 aa16.93■□□□□ 0.3
VEGFA-231ENST00000640499 A0A087WYN8 130 aa16.92■□□□□ 0.3
VEGFA-231ENST00000640499 HBDP02042 147 aa16.92■□□□□ 0.3
VEGFA-231ENST00000640499 RAB5BP61020 215 aa16.92■□□□□ 0.3
VEGFA-231ENST00000640499 IGKV2-24A0A0C4DH68 120 aa16.91■□□□□ 0.3
VEGFA-231ENST00000640499 KRTAP10-4P60372 401 aaPredicted RBP16.91■□□□□ 0.3
VEGFA-231ENST00000640499 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.9■□□□□ 0.3
VEGFA-231ENST00000640499 HERVK_113P63121 156 aa16.9■□□□□ 0.3
VEGFA-231ENST00000640499 PMVKQ15126 192 aa16.9■□□□□ 0.3
VEGFA-231ENST00000640499 UNQ6190/PRO20217Q6UXQ8 127 aa16.9■□□□□ 0.3
VEGFA-231ENST00000640499 SEC11AP67812 179 aa16.89■□□□□ 0.29
VEGFA-231ENST00000640499 PLAC8Q9NZF1 115 aa16.89■□□□□ 0.29
VEGFA-231ENST00000640499 MAJINQ3KP22 176 aa16.88■□□□□ 0.29
VEGFA-231ENST00000640499 CHCHD1Q96BP2 118 aaKnown RBP16.88■□□□□ 0.29
VEGFA-231ENST00000640499 MRPL35Q9NZE8 188 aaKnown RBP16.88■□□□□ 0.29
VEGFA-231ENST00000640499 IGLV5-45A0A087WSX0 123 aa16.87■□□□□ 0.29
VEGFA-231ENST00000640499 TINCRA0A1B0GVN0 87 aa16.87■□□□□ 0.29
VEGFA-231ENST00000640499 F8WDY8 70 aa16.87■□□□□ 0.29
VEGFA-231ENST00000640499 RNF151Q2KHN1 245 aa16.87■□□□□ 0.29
VEGFA-231ENST00000640499 GEMIN7Q9H840 131 aaKnown RBP16.87■□□□□ 0.29
VEGFA-231ENST00000640499 LINC00310P59036 64 aa16.86■□□□□ 0.29
VEGFA-231ENST00000640499 C2orf82Q6UX34 121 aa16.86■□□□□ 0.29
VEGFA-231ENST00000640499 DPH3Q96FX2 82 aa16.86■□□□□ 0.29
VEGFA-231ENST00000640499 C6orf48Q9UBA6 75 aa16.86■□□□□ 0.29
VEGFA-231ENST00000640499 LOC107984640A0A0U1RRK4 108 aa16.84■□□□□ 0.29
VEGFA-231ENST00000640499 NDUFA1O15239 70 aa16.84■□□□□ 0.29
VEGFA-231ENST00000640499 PTTG1IPP53801 180 aa16.84■□□□□ 0.29
VEGFA-231ENST00000640499 INAFM2P0DMQ5 153 aa16.82■□□□□ 0.28
VEGFA-231ENST00000640499 LINC00469Q8N7U9 141 aa16.82■□□□□ 0.28
VEGFA-231ENST00000640499 STPG4Q8N801 248 aa16.82■□□□□ 0.28
VEGFA-231ENST00000640499 SMIM1B2RUZ4 78 aa16.81■□□□□ 0.28
VEGFA-231ENST00000640499 ATP5LO75964 103 aa16.81■□□□□ 0.28
VEGFA-231ENST00000640499 GAGE2BQ13066 116 aa16.81■□□□□ 0.28
VEGFA-231ENST00000640499 BAGE3Q86Y29 109 aa16.81■□□□□ 0.28
VEGFA-231ENST00000640499 PLA2G1BP04054 148 aaKnown RBP16.8■□□□□ 0.28
VEGFA-231ENST00000640499 IGLC3P0DOY3 106 aa16.8■□□□□ 0.28
VEGFA-231ENST00000640499 NDUFA6P56556 154 aa16.8■□□□□ 0.28
VEGFA-231ENST00000640499 FAM19A2Q8N3H0 131 aa16.8■□□□□ 0.28
VEGFA-231ENST00000640499 PKHD1L1Q86WI1 4243 aa16.8■□□□□ 0.28
VEGFA-231ENST00000640499 NUPR1O60356 82 aa16.79■□□□□ 0.28
VEGFA-231ENST00000640499 Q8IZM0 81 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms