RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 GHRHP01286 108 aa6.56□□□□□ -1.36
PAX6-259ENST00000639916 XCL1P47992 114 aa6.56□□□□□ -1.36
PAX6-259ENST00000639916 C9orf47Q6ZRZ4 202 aa6.56□□□□□ -1.36
PAX6-259ENST00000639916 XCL2Q9UBD3 114 aa6.56□□□□□ -1.36
PAX6-259ENST00000639916 NDUFA12Q9UI09 145 aa6.56□□□□□ -1.36
PAX6-259ENST00000639916 LYPD5Q6UWN5 251 aa6.56□□□□□ -1.36
PAX6-259ENST00000639916 PHLDA3Q9Y5J5 127 aa6.56□□□□□ -1.36
PAX6-259ENST00000639916 PDZD2O15018 2839 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 RBMY1BA6NDE4 496 aaKnown RBP6.55□□□□□ -1.36
PAX6-259ENST00000639916 RBMY1EA6NEQ0 496 aaKnown RBP6.55□□□□□ -1.36
PAX6-259ENST00000639916 VCYO14598 125 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 RBMY1DP0C7P1 496 aaKnown RBP6.55□□□□□ -1.36
PAX6-259ENST00000639916 RBMY1A1P0DJD3 496 aaKnown RBP6.55□□□□□ -1.36
PAX6-259ENST00000639916 RBMY1CP0DJD4 496 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 HILS1P60008 231 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 RBMY1FQ15415 496 aaKnown RBP6.55□□□□□ -1.36
PAX6-259ENST00000639916 KRTAP1-3Q8IUG1 177 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 FAM218AQ96MZ4 157 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 IGHV4OR15-8A0A075B7B6 117 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 A0A087WW49 117 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 A0A1W2PRX2 142 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 KNCNA6PVL3 124 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 SOCS3O14543 225 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 S100A4P26447 101 aaKnown RBP6.55□□□□□ -1.36
PAX6-259ENST00000639916 DEFB1P60022 68 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 LINC00474Q9P2X8 69 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 OTOGQ6ZRI0 2925 aa6.55□□□□□ -1.36
PAX6-259ENST00000639916 TMEM89A2RUT3 159 aa6.54□□□□□ -1.36
PAX6-259ENST00000639916 LINC00315P59091 139 aa6.54□□□□□ -1.36
PAX6-259ENST00000639916 ZNF702PQ9H963 129 aa6.54□□□□□ -1.36
PAX6-259ENST00000639916 K7EMT4 169 aa6.54□□□□□ -1.36
PAX6-259ENST00000639916 RPL28P46779 137 aaKnown RBP6.54□□□□□ -1.36
PAX6-259ENST00000639916 C9orf129Q5T035 196 aaKnown RBP6.54□□□□□ -1.36
PAX6-259ENST00000639916 C14orf132Q9NPU4 83 aa6.54□□□□□ -1.36
PAX6-259ENST00000639916 A8MZ25 164 aa6.53□□□□□ -1.36
PAX6-259ENST00000639916 Q9HAA7 133 aa6.53□□□□□ -1.36
PAX6-259ENST00000639916 ITPR3Q14573 2671 aa6.53□□□□□ -1.36
PAX6-259ENST00000639916 IGHV1-58A0A0C4DH39 117 aa6.53□□□□□ -1.36
PAX6-259ENST00000639916 TRBV27A0A0K0K1C4 114 aa6.53□□□□□ -1.36
PAX6-259ENST00000639916 F6UB75 175 aa6.53□□□□□ -1.36
PAX6-259ENST00000639916 SUMO4Q6EEV6 95 aa6.53□□□□□ -1.36
PAX6-259ENST00000639916 FAM19A1Q7Z5A9 133 aa6.53□□□□□ -1.36
PAX6-259ENST00000639916 KIF25-AS1Q9Y6Z4 181 aa6.53□□□□□ -1.36
PAX6-259ENST00000639916 SONP18583 2426 aaKnown RBP6.53□□□□□ -1.36
PAX6-259ENST00000639916 MYO9AB2RTY4 2548 aa6.52□□□□□ -1.37
PAX6-259ENST00000639916 TRAV23DV6A0A075B6W5 121 aa6.52□□□□□ -1.37
PAX6-259ENST00000639916 SS18Q15532 418 aa6.52□□□□□ -1.37
PAX6-259ENST00000639916 C6orf226Q5I0X4 101 aa6.52□□□□□ -1.37
PAX6-259ENST00000639916 LENEPQ9Y5L5 61 aa6.52□□□□□ -1.37
PAX6-259ENST00000639916 MRPS36P82909 103 aaKnown RBP6.52□□□□□ -1.37
PAX6-259ENST00000639916 IGLV4-3A0A075B6K6 122 aa6.51□□□□□ -1.37
PAX6-259ENST00000639916 ACANP16112 2415 aa6.51□□□□□ -1.37
PAX6-259ENST00000639916 MUC4Q99102 2169 aa6.51□□□□□ -1.37
PAX6-259ENST00000639916 ZFAND2AQ8N6M9 145 aa6.51□□□□□ -1.37
PAX6-259ENST00000639916 VSIG2Q96IQ7 327 aa6.51□□□□□ -1.37
PAX6-259ENST00000639916 UBE2E2Q96LR5 201 aa6.51□□□□□ -1.37
PAX6-259ENST00000639916 MAST4O15021 2626 aa6.51□□□□□ -1.37
PAX6-259ENST00000639916 TIMM17BO60830 172 aa6.5□□□□□ -1.37
PAX6-259ENST00000639916 RNASE3P12724 160 aaKnown RBP6.5□□□□□ -1.37
PAX6-259ENST00000639916 WFDC9Q8NEX5 89 aa6.5□□□□□ -1.37
PAX6-259ENST00000639916 FLNAP21333 2647 aaKnown RBP6.5□□□□□ -1.37
PAX6-259ENST00000639916 RNASE4P34096 147 aaKnown RBP6.5□□□□□ -1.37
PAX6-259ENST00000639916 NIPBLQ6KC79 2804 aaeCLIP6.5□□□□□ -1.37
PAX6-259ENST00000639916 A0A087WWL8 130 aa6.49□□□□□ -1.37
PAX6-259ENST00000639916 TRAV21A0A0B4J279 112 aa6.49□□□□□ -1.37
PAX6-259ENST00000639916 GNRH2O43555 120 aa6.49□□□□□ -1.37
PAX6-259ENST00000639916 CCKP06307 115 aa6.49□□□□□ -1.37
PAX6-259ENST00000639916 HOXD3P31249 432 aaPredicted RBP6.49□□□□□ -1.37
PAX6-259ENST00000639916 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
PAX6-259ENST00000639916 TRBV7-6A0A0J9YX20 115 aa6.49□□□□□ -1.37
PAX6-259ENST00000639916 A0A0U1RRA0 63 aa6.49□□□□□ -1.37
PAX6-259ENST00000639916 F5H697 171 aa6.49□□□□□ -1.37
PAX6-259ENST00000639916 MED14OSP0DP75 135 aa6.49□□□□□ -1.37
PAX6-259ENST00000639916 C20orf203Q8NBC4 194 aa6.49□□□□□ -1.37
PAX6-259ENST00000639916 OBSCN-AS1Q96MR7 158 aa6.48□□□□□ -1.37
PAX6-259ENST00000639916 SORL1Q92673 2214 aa6.48□□□□□ -1.37
PAX6-259ENST00000639916 TRBV6-5A0A0K0K1A5 114 aa6.48□□□□□ -1.37
PAX6-259ENST00000639916 PMAIP1Q13794 54 aa6.48□□□□□ -1.37
PAX6-259ENST00000639916 DEFB136Q30KP8 78 aa6.48□□□□□ -1.37
PAX6-259ENST00000639916 C18orf65Q6ZTR6 163 aa6.48□□□□□ -1.37
PAX6-259ENST00000639916 RBM3P98179 157 aaKnown RBP6.47□□□□□ -1.37
PAX6-259ENST00000639916 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
PAX6-259ENST00000639916 FAM104AQ969W3 186 aa6.47□□□□□ -1.37
PAX6-259ENST00000639916 SNRPD3P62318 126 aaKnown RBP6.47□□□□□ -1.37
PAX6-259ENST00000639916 APRG1Q8IVJ8 170 aa6.47□□□□□ -1.37
PAX6-259ENST00000639916 COPS9Q8WXC6 57 aa6.47□□□□□ -1.37
PAX6-259ENST00000639916 TEP1Q99973 2627 aaKnown RBP6.47□□□□□ -1.37
PAX6-259ENST00000639916 MTORP42345 2549 aa6.47□□□□□ -1.37
PAX6-259ENST00000639916 SLURP1P55000 103 aa6.46□□□□□ -1.37
PAX6-259ENST00000639916 KHDC1LQ5JSQ8 128 aa6.46□□□□□ -1.37
PAX6-259ENST00000639916 SOSTDC1Q6X4U4 206 aa6.46□□□□□ -1.37
PAX6-259ENST00000639916 F8WEM9 126 aa6.46□□□□□ -1.38
PAX6-259ENST00000639916 K7EQG2 157 aa6.46□□□□□ -1.38
PAX6-259ENST00000639916 SNURFQ9Y675 71 aa6.46□□□□□ -1.38
PAX6-259ENST00000639916 KLLNB2CW77 178 aa6.46□□□□□ -1.38
PAX6-259ENST00000639916 IGKV3-20P01619 116 aa6.46□□□□□ -1.38
PAX6-259ENST00000639916 CD28P10747 220 aa6.46□□□□□ -1.38
PAX6-259ENST00000639916 RNASE13Q5GAN3 156 aaKnown RBP6.46□□□□□ -1.38
PAX6-259ENST00000639916 ENHOQ6UWT2 76 aa6.46□□□□□ -1.38
PAX6-259ENST00000639916 RMI2Q96E14 147 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms