RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 PRR34Q9NV39 138 aa9.74□□□□□ -0.85
CNTNAP2-225ENST00000639247 COX11Q9Y6N1 276 aa9.74□□□□□ -0.85
CNTNAP2-225ENST00000639247 LCE6AA0A183 80 aa9.73□□□□□ -0.85
CNTNAP2-225ENST00000639247 IBA57-AS1B1ANH7 110 aa9.73□□□□□ -0.85
CNTNAP2-225ENST00000639247 STPG4Q8N801 248 aa9.73□□□□□ -0.85
CNTNAP2-225ENST00000639247 Q6ZN92 141 aa9.73□□□□□ -0.85
CNTNAP2-225ENST00000639247 CST9LQ9H4G1 147 aa9.73□□□□□ -0.85
CNTNAP2-225ENST00000639247 LINC00959A0A1B0GUT2 108 aa9.72□□□□□ -0.85
CNTNAP2-225ENST00000639247 ATP5LO75964 103 aa9.72□□□□□ -0.85
CNTNAP2-225ENST00000639247 Q6ZR54 194 aa9.72□□□□□ -0.85
CNTNAP2-225ENST00000639247 CRPP02741 224 aa9.71□□□□□ -0.85
CNTNAP2-225ENST00000639247 C3orf79P0CE67 100 aa9.71□□□□□ -0.85
CNTNAP2-225ENST00000639247 XCL1P47992 114 aa9.71□□□□□ -0.85
CNTNAP2-225ENST00000639247 KRTDAPP60985 99 aa9.71□□□□□ -0.85
CNTNAP2-225ENST00000639247 COX6A2Q02221 97 aa9.71□□□□□ -0.85
CNTNAP2-225ENST00000639247 OCIAD2Q56VL3 154 aa9.71□□□□□ -0.85
CNTNAP2-225ENST00000639247 CFAP161Q6P656 301 aa9.71□□□□□ -0.85
CNTNAP2-225ENST00000639247 HSPB8Q9UJY1 196 aa9.71□□□□□ -0.85
CNTNAP2-225ENST00000639247 PAM16Q9Y3D7 125 aa9.71□□□□□ -0.85
CNTNAP2-225ENST00000639247 A0A0J9YXV3 536 aa9.71□□□□□ -0.86
CNTNAP2-225ENST00000639247 TRAV9-2A0A087WT02 112 aa9.7□□□□□ -0.86
CNTNAP2-225ENST00000639247 UBE2D1P51668 147 aa9.7□□□□□ -0.86
CNTNAP2-225ENST00000639247 PMVKQ15126 192 aa9.7□□□□□ -0.86
CNTNAP2-225ENST00000639247 UQCR10Q9UDW1 63 aa9.7□□□□□ -0.86
CNTNAP2-225ENST00000639247 IGKV2D-24A0A075B6R9 120 aa9.7□□□□□ -0.86
CNTNAP2-225ENST00000639247 LINC00242Q5T6M2 205 aa9.7□□□□□ -0.86
CNTNAP2-225ENST00000639247 MAPKAPK5-AS1Q8N8E1 139 aa9.7□□□□□ -0.86
CNTNAP2-225ENST00000639247 CHCHD10Q8WYQ3 142 aaPredicted RBP9.7□□□□□ -0.86
CNTNAP2-225ENST00000639247 SMAGPQ0VAQ4 97 aa9.69□□□□□ -0.86
CNTNAP2-225ENST00000639247 C10orf126Q8N4M7 172 aa9.69□□□□□ -0.86
CNTNAP2-225ENST00000639247 SYS1-DBNDD2H3BUS1 97 aa9.68□□□□□ -0.86
CNTNAP2-225ENST00000639247 KRTAP26-1Q6PEX3 210 aa9.68□□□□□ -0.86
CNTNAP2-225ENST00000639247 MAP1LC3CQ9BXW4 147 aa9.68□□□□□ -0.86
CNTNAP2-225ENST00000639247 MRPL35Q9NZE8 188 aaKnown RBP9.68□□□□□ -0.86
CNTNAP2-225ENST00000639247 IGLV4-69A0A075B6H9 119 aa9.68□□□□□ -0.86
CNTNAP2-225ENST00000639247 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
CNTNAP2-225ENST00000639247 K7ERU9 68 aa9.68□□□□□ -0.86
CNTNAP2-225ENST00000639247 ODF1Q14990 250 aa9.68□□□□□ -0.86
CNTNAP2-225ENST00000639247 RYR2Q92736 4967 aa9.68□□□□□ -0.86
CNTNAP2-225ENST00000639247 HNRNPA3P51991 378 aaKnown RBP9.67□□□□□ -0.86
CNTNAP2-225ENST00000639247 MIAQ16674 131 aa9.67□□□□□ -0.86
CNTNAP2-225ENST00000639247 TTC32Q5I0X7 151 aa9.67□□□□□ -0.86
CNTNAP2-225ENST00000639247 GAGE12HA6NDE8 117 aa9.67□□□□□ -0.86
CNTNAP2-225ENST00000639247 LECT2O14960 151 aa9.67□□□□□ -0.86
CNTNAP2-225ENST00000639247 PAPPA-AS1Q5QFB9 102 aa9.67□□□□□ -0.86
CNTNAP2-225ENST00000639247 TRAV8-3A0A0A6YYJ7 113 aa9.66□□□□□ -0.86
CNTNAP2-225ENST00000639247 SS18Q15532 418 aa9.66□□□□□ -0.86
CNTNAP2-225ENST00000639247 C5orf38Q86SI9 138 aa9.66□□□□□ -0.86
CNTNAP2-225ENST00000639247 C1orf43Q9BWL3 253 aa9.66□□□□□ -0.86
CNTNAP2-225ENST00000639247 RYR3Q15413 4870 aa9.66□□□□□ -0.86
CNTNAP2-225ENST00000639247 Q6ZRN7 208 aaPredicted RBP9.65□□□□□ -0.86
CNTNAP2-225ENST00000639247 DNAH6Q9C0G6 4158 aa9.65□□□□□ -0.86
CNTNAP2-225ENST00000639247 C11orf86A6NJI1 115 aa9.65□□□□□ -0.87
CNTNAP2-225ENST00000639247 IGLC3P0DOY3 106 aa9.65□□□□□ -0.87
CNTNAP2-225ENST00000639247 FOXI1Q12951 378 aa9.65□□□□□ -0.87
CNTNAP2-225ENST00000639247 ATOH7Q8N100 152 aa9.65□□□□□ -0.87
CNTNAP2-225ENST00000639247 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.87
CNTNAP2-225ENST00000639247 FRAS1Q86XX4 4008 aa9.65□□□□□ -0.87
CNTNAP2-225ENST00000639247 WFDC2Q14508 124 aa9.64□□□□□ -0.87
CNTNAP2-225ENST00000639247 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
CNTNAP2-225ENST00000639247 TRAV12-1A0A0B4J245 112 aa9.63□□□□□ -0.87
CNTNAP2-225ENST00000639247 SPATA45Q537H7 98 aa9.63□□□□□ -0.87
CNTNAP2-225ENST00000639247 C6orf223Q8N319 242 aa9.63□□□□□ -0.87
CNTNAP2-225ENST00000639247 IGHV3OR16-9A0A0B4J2B5 98 aa9.63□□□□□ -0.87
CNTNAP2-225ENST00000639247 C1orf134Q5TEV5 83 aa9.63□□□□□ -0.87
CNTNAP2-225ENST00000639247 TRAV8-4A0A0B4J246 113 aa9.62□□□□□ -0.87
CNTNAP2-225ENST00000639247 F8VRH5 84 aa9.62□□□□□ -0.87
CNTNAP2-225ENST00000639247 GEMIN7Q9H840 131 aaKnown RBP9.62□□□□□ -0.87
CNTNAP2-225ENST00000639247 IGHV3-64A0A075B6Q5 118 aa9.62□□□□□ -0.87
CNTNAP2-225ENST00000639247 RTL8CO15255 209 aa9.62□□□□□ -0.87
CNTNAP2-225ENST00000639247 LINC01545Q5VT33 79 aa9.62□□□□□ -0.87
CNTNAP2-225ENST00000639247 CD164L2Q6UWJ8 174 aa9.62□□□□□ -0.87
CNTNAP2-225ENST00000639247 LINC00526Q96FQ7 95 aa9.62□□□□□ -0.87
CNTNAP2-225ENST00000639247 TINCRA0A1B0GVN0 87 aa9.61□□□□□ -0.87
CNTNAP2-225ENST00000639247 ZNF22P17026 224 aaPredicted RBP9.61□□□□□ -0.87
CNTNAP2-225ENST00000639247 VAMP3Q15836 100 aa9.61□□□□□ -0.87
CNTNAP2-225ENST00000639247 PSCAO43653 123 aa9.6□□□□□ -0.87
CNTNAP2-225ENST00000639247 TMEM170BQ5T4T1 132 aa9.6□□□□□ -0.87
CNTNAP2-225ENST00000639247 PET117Q6UWS5 81 aa9.6□□□□□ -0.87
CNTNAP2-225ENST00000639247 SPINK8P0C7L1 97 aa9.6□□□□□ -0.87
CNTNAP2-225ENST00000639247 FUSP35637 526 aaKnown RBP eCLIP9.6□□□□□ -0.87
CNTNAP2-225ENST00000639247 HINT1P49773 126 aaPredicted RBP9.6□□□□□ -0.87
CNTNAP2-225ENST00000639247 Q6ZVH6 145 aa9.6□□□□□ -0.87
CNTNAP2-225ENST00000639247 FAM19A3Q7Z5A8 133 aa9.6□□□□□ -0.87
CNTNAP2-225ENST00000639247 HERVK_113P63121 156 aa9.59□□□□□ -0.87
CNTNAP2-225ENST00000639247 NFE4Q86UQ8 179 aa9.59□□□□□ -0.87
CNTNAP2-225ENST00000639247 DNAH17Q9UFH2 4485 aa9.58□□□□□ -0.88
CNTNAP2-225ENST00000639247 COX7A2LO14548 114 aa9.58□□□□□ -0.88
CNTNAP2-225ENST00000639247 DPM2O94777 84 aa9.58□□□□□ -0.88
CNTNAP2-225ENST00000639247 IGKCP01834 107 aa9.58□□□□□ -0.88
CNTNAP2-225ENST00000639247 SCGB1A1P11684 91 aa9.58□□□□□ -0.88
CNTNAP2-225ENST00000639247 TNP2Q05952 138 aa9.58□□□□□ -0.88
CNTNAP2-225ENST00000639247 HIGD2BQ4VC39 106 aa9.58□□□□□ -0.88
CNTNAP2-225ENST00000639247 RMI2Q96E14 147 aa9.57□□□□□ -0.88
CNTNAP2-225ENST00000639247 FAT2Q9NYQ8 4349 aa9.57□□□□□ -0.88
CNTNAP2-225ENST00000639247 IGLV5-45A0A087WSX0 123 aa9.57□□□□□ -0.88
CNTNAP2-225ENST00000639247 A0A087WZ39 114 aa9.57□□□□□ -0.88
CNTNAP2-225ENST00000639247 MALP21145 153 aa9.57□□□□□ -0.88
CNTNAP2-225ENST00000639247 C15orf56Q8N910 161 aa9.57□□□□□ -0.88
CNTNAP2-225ENST00000639247 LRCOL1A6NCL2 159 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms